Cyanistes caeruleus (blue tit): 111923558
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Entry
111923558 CDS
T05602
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111923558 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccae03032
]
111923558 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
ccae03400
]
111923558 (TOPBP1)
DNA replication proteins [BR:
ccae03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
111923558 (TOPBP1)
DNA repair and recombination proteins [BR:
ccae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
111923558 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
TopBP1_BRCT0
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
111923558
NCBI-ProteinID:
XP_023775122
LinkDB
All DBs
Position
2
AA seq
1523 aa
AA seq
DB search
MRSSKEPFFVKFIKSSGSSEYFSKALESIKEFQSEEHLQILEEASVLNIKESGLHPVFRE
ESNQQSIMIIFSNLEKQTLGCRIVGPQVVLYCMQSQRCVPRAEYPVYNMTMADVTVSCTS
LEKDVREEVHKYVQMMGGCVYRDLNVSVTHLIAGEVGSKKYLVAASLKKPILLPSWVKTL
WDKSQQGIMRYTDINMEDYACPVFLGCTICVTGLSSSDRKEVQRLTTEHGGQYTGQLKMN
ECTHLIVQEPKGQKYECAKKWNVHCVSVQWFSDSIKKGFCQDEAMYKVEAGSKPCNAPST
STPTNDTIKPPNHTLSDVSHISNINLSGVNETSCTSAMNSRLDPLSDELENLDISSFQAP
EDLLDGCRIYLCGFSGRKLDKMRRLINCGGGVRFNQLNEDVTHVIVGENNNELKQFLDKT
AHRPNIVTAEWLLESFGKGCLCPVENYIPLNYQLLENPILEQPGMKSIFPKKPGLLKKDT
VNIIKHQKAAEDDFLSQYVNNYSTLDEVEKLTSRTFSDVTNSTAQGENQPPVCNGSLAES
SALAEGGLFFGKRFLLLGFGEEDESCIADIIKENAGEVLPPQSRTIADYAVVPLLGCTVR
ATVGDVVTNTWLITCAEQQALLDLRSNPLFTPVLVMEGATPLEDCVLSFSQFTGAERDSL
VYLAGLLGARVQEFFVRKASAKKGMFASTHLVVREPNGSKYEAAKKWNLPAVTVAWLLQS
ARTGKRADESKFLVENAEAEDTESFITQLSRTPAPVKAPDLEQPTYLLEAGKKGAVTPLD
INRFQSKAFQAVISHHTGKTTPVAQGGPLQKEPSLNLDTPSKFLSEDKFFKPSFDVKDAL
EALETPRGPEQRTRKLSTPLSEVISRNLKLALASSTTHAAALTASPQLAAAQPEVEEEPK
PLADAVIYVSKKLSKRQRELNAIAASLGADYRWCFDETVTHFIYKGGQNDNNKEYKSVKE
RGIHIVSEHWLLASARECKRLPESLFPHTYNPKMSLDISAVEDIRFSSSSKPLSAGKPAE
ESEIIPVVEDDAEDDVTTDQIKEKVPVGEEQIVASESKGVLTQALEMRENFQKQLQELMS
ATSLVKPQGQRRSLSRSSFDGSPATPDSARSVRNGRSRVLEALRQSRQALADTNTEPSQS
EQIIWDDPTAREERARLVSNLQWPNSPSQYLEQGQSNTSKNMDEIKGSVPDAEMADIAVP
EAGDGHVIESLKNPTCRDPEMPIKDNLIPTPQAPSIAFPLANPPVAPEPKEKVVPEDEKA
DEEIEKLCKFQLSSLNPQERIDYCHLIEELGGTVLEKQYFDPSCTHIVVGHPLRNEKFLA
SMAAGKWVLHRSYLEACRGAGCFVQEEDYEWGSKSVLNVLSGINVNQKKLALAAMRWRKK
IHKGRQETGIVEGAFSGWKVILNVDQTKEAGFRRLLQSGGAKVFSGHSASLFKEATHLFA
DFSKLKPDDSRVNVAEAAAQGVNCLKPEYIADYLIQDPPPPMESYCLPEAESYLQNNSDL
GTGLSQKRKALGEMSRVKRSRIH
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtagtaaggagccgttttttgtgaagttcataaagtcttccgggagttcggag
tatttttctaaagctcttgagtctataaaagaattccagtcagaagagcatctccagatc
cttgaagaagcatcagtactcaatataaaagaaagtggacttcatcctgtatttagggaa
gagagtaaccagcaaagcataatgattattttcagtaatttggaaaagcaaacacttggc
tgtaggattgttggaccacaggtagttctgtactgcatgcagtcacagcggtgtgtcccg
agagccgagtatcctgtgtacaacatgaccatggccgatgtcacggtgtcctgtaccagc
ctggagaaggatgtgagggaagaagttcataaatatgtgcaaatgatgggtggatgtgta
tatagagaccttaatgtgtcagtaactcaccttatagctggagaagttggcagcaagaaa
tacttggtagctgcttccctgaagaaacctattttgcttccttcttgggttaagacattg
tgggataagtctcagcaaggcataatgaggtatactgatattaacatggaagactacgct
tgtcctgtgtttctgggctgcacgatttgtgtcactggcttaagcagctctgacaggaaa
gaagtgcagcgcctcactactgagcacggtgggcagtacacggggcagctcaagatgaat
gaatgcactcacctcatagtgcaagagccaaaaggtcagaagtatgaatgtgccaaaaag
tggaatgtgcactgtgtgtctgtgcagtggttttctgacagcatcaagaaaggcttctgt
caggacgaggcaatgtataaagtagaggctggatcaaaaccatgtaatgcacccagtacc
tcaacacctacaaatgacaccatcaagcctcctaatcataccctttcggatgtcagccac
atttccaatatcaatttgagtggtgttaatgaaacttcatgtacttcagctatgaacagc
agactggatcctctttctgatgagctggagaacttggacataagttcttttcaagcccct
gaagatttgttagatgggtgtcgaatctatctctgtggtttcagtggcaggaagttggac
aagatgagaaggcttattaattgtggtggtggcgttcgatttaatcagcttaatgaagat
gttactcatgtcattgtgggggaaaataataatgagctgaaacaatttttggacaagaca
gctcacaggcctaatatagtgacagcagagtggttactggagtcatttggtaaaggttgt
ctttgtccagtggagaactatatccctctaaactaccagctgttagagaatccaatttta
gaacaacctggaatgaagtcaatttttccaaaaaaacccggtctcttgaagaaagacact
gtgaacattataaagcaccagaaagctgctgaagatgacttcctctctcaatatgtaaat
aactattctacactagatgaagttgaaaaactaacatccagaaccttcagtgatgttact
aactcgactgcccaaggagagaatcagcctcctgtctgtaatgggtctttggcagagtct
tctgcattggctgaaggaggcttattttttgggaagagatttcttcttctgggttttggt
gaagaggatgagtcctgcattgcagatattataaaggagaatgctggggaagttctgcca
ccacagagcagaaccattgcagactatgctgtggtacctttattagggtgcactgtgagg
gcaactgttggtgacgtcgtcacaaatacatggctgataacgtgtgcggaacagcaggcc
cttttagatctccgatccaatccacttttcacaccagtcctggtaatggaaggagctacc
cctctggaagattgtgttctttcttttagccagttcacgggtgcagagagagactccctt
gtttatctggcaggactcctgggagccagagtccaagaattctttgtgcggaaagccagt
gcaaaaaaaggaatgtttgccagtacccatcttgtggtaagagagccaaatggctccaag
tatgaagctgcaaagaagtggaatttgccagcagtcactgtagcttggcttttgcagtct
gcaaggacaggaaagagggcagatgaaagcaaattcttggttgaaaacgcagaggctgaa
gatacggagagtttcattactcagcttagcaggacaccagcacctgttaaagctcctgat
ttagaacagcctacttatctccttgaagctggaaaaaaaggagctgtgacccctcttgat
atcaacaggttccagagtaaagctttccaagctgttatctctcatcatactgggaagaca
actcctgttgcacaagggggaccactccagaaagaaccatctttaaatcttgacacacca
tcaaagtttctttctgaagacaagtttttcaagccttcttttgatgtaaaggatgctctg
gaagctctggaaactcctagaggtcctgaacaaagaaccaggaaactgagcacacctctc
tcggaagtcatcagcagaaacttgaaactggcactggcaagcagcacaacacatgcagca
gctcttactgccagccctcagttggctgctgcacagccagaagtggaagaagagcccaag
cctctagctgatgctgttatatatgttagtaaaaaacttagtaagaggcaaagggagctg
aatgcaatagcagcttctcttggagcagactacagatggtgctttgatgaaacagtaaca
cacttcatctataagggaggacagaatgataacaataaggagtacaaatctgttaaagaa
cggggtatacatattgtttcagaacattggcttttagcgagtgcccgagaatgtaaacgg
cttcctgaatctctctttcctcacacttacaatcccaaaatgagcctggacatcagtgca
gtggaagacatcaggttctcctcctccagtaaacctctttcagctggaaaaccagcagag
gaaagtgagattattccagtggttgaagatgatgctgaagatgatgtaactactgaccaa
ataaaggaaaaagtccctgtaggggaagaacaaattgtagcaagtgaatccaaaggagtt
ttaacccaagcactagaaatgagggagaacttccaaaagcagctgcaggagctcatgtct
gccacatcactagtgaaaccacaaggacagagaaggtccctttccaggagcagctttgat
ggttctccagccactcctgatagcgcacggtctgtgcgaaatggccgcagtagggtcttg
gaagccctaaggcagtcccgccaggcactggcagatacaaacacagagccatcccagagt
gagcagatcatttgggatgatcctactgcaagggaagagagagcaagacttgtcagcaac
cttcagtggcctaatagtccttcccagtaccttgagcaaggtcagagtaacaccagtaag
aacatggatgagatcaaaggatctgtacctgatgcagagatggctgatatagctgttcct
gaggctggggatggacatgtgattgaaagtctaaagaatcccacatgtagagatcctgaa
atgccaattaaggataacttgatccccacgccacaggcccccagcattgctttccccctg
gctaaccctcctgtggcaccagagcccaaagaaaaggttgttcctgaagatgagaaggct
gatgaagaaatagaaaaactctgtaaatttcagctgtcttctcttaatcctcaagaaaga
attgattactgccatctgattgaggaattaggtggaacagtacttgagaaacagtacttt
gatccgagttgcacacacattgttgtgggacatcctcttcggaatgaaaaattcttggct
tcgatggcagctggaaagtgggtgcttcatcgttcctacctggaggcgtgtagaggagct
ggctgctttgttcaggaagaagactatgagtggggaagtaaatctgtacttaatgttttg
tctggaatcaatgtaaaccagaagaaactagcactggcagccatgaggtggaggaaaaaa
attcataaagggaggcaagaaacgggtattgttgagggagctttcagtggttggaaagtg
atcctgaacgttgatcaaaccaaggaagcaggattcaggcgccttcttcagtcaggagga
gcaaaagttttttctggccattctgcatctctctttaaagaagcaactcacctctttgct
gacttcagtaagctgaagccagatgactccagggttaacgtggcagaggcggcagcccag
ggagtgaactgcctcaaacccgagtacatcgctgactacctcatccaggatccacctccc
cctatggagtcttactgcctgccagaagctgagtcttaccttcagaataactcagatctt
ggaaccggattatcccagaaaagaaaagcactgggagaaatgagcagagtcaagcgatcc
agaatacactaa
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integrated database retrieval system
