Cyanistes caeruleus (blue tit): 111923586
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Entry
111923586 CDS
T05602
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111923586 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111923586 (EXOSC7)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111923586 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
111923586 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111923586
NCBI-ProteinID:
XP_023775160
UniProt:
A0A8C0UTX2
LinkDB
All DBs
Position
2
AA seq
290 aa
AA seq
DB search
MAAVVLSEAEKLYIVHGVQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGETDILV
GIKAEMGTPKLEKPDEGYLEFFVDCSSNSPELEGRGGEELGTDIANTLYRVFSCENSVDL
KSLCINPKEHCWVLYVDILLLECGGNIFDAISIAVKAALFNTRIPKVRVLEDEEGTKEIE
LSDDPYDCIRVNVDEVPCIVTLSKIGYRHVVDATLQEEACSLASLLISVTSKGAITSMKK
VGKGSLDPESIFEMMETGQRVGKSLHIALQKILDEEENLGTSRTKVGFLG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtggtgctgagcgaggcggagaagctgtacatcgtgcacggcgtgcaggaa
gaccttcgtgtagatggtcgaggctgtgaagactacagatgtgcagaagtagaaacagat
gttgtatcaaacacaagtggatctgcaagagtaaagctgggagaaactgatatcttggta
ggcataaaagctgaaatggggacaccgaagttggagaaaccagatgaaggttacctggaa
ttttttgttgactgttcttcaaattctcctgagttggaaggccggggaggagaagaactt
ggcacagatatagcaaatacactgtacagagtattcagctgtgagaacagtgtagacttg
aaatccctttgtattaatcccaaggagcactgctgggttctctacgtggacatattgtta
ttagaatgtggtgggaacatctttgatgcaatctctatcgcagtgaaggcagctctcttt
aacacaagaatacctaaagtgcgtgttctggaggatgaagaaggcaccaaagagattgag
ctgtctgatgacccttatgattgtattcgagtcaacgtcgatgaggtgccctgtattgtc
acactaagcaaaattggatacaggcacgtggtggatgctaccctacaggaagaagcctgt
tctttggcaagcctgcttatttcggtgaccagtaaaggtgccatcacttcaatgaagaag
gtggggaaaggtagcctggatcctgagagtatttttgaaatgatggagacaggacaaaga
gtaggcaagtcacttcacatagcccttcagaagattttggatgaagaagagaatttgggg
acttcacgaacaaaagttggatttctaggatga
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