KEGG   Cyanistes caeruleus (blue tit): 111923586
Entry
111923586         CDS       T05602                                 
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
ccae  Cyanistes caeruleus (blue tit)
Pathway
ccae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111923586 (EXOSC7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccae03019]
    111923586 (EXOSC7)
Messenger RNA biogenesis [BR:ccae03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     111923586 (EXOSC7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     111923586 (EXOSC7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 111923586
NCBI-ProteinID: XP_023775160
UniProt: A0A8C0UTX2
LinkDB
Position
2
AA seq 290 aa
MAAVVLSEAEKLYIVHGVQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGETDILV
GIKAEMGTPKLEKPDEGYLEFFVDCSSNSPELEGRGGEELGTDIANTLYRVFSCENSVDL
KSLCINPKEHCWVLYVDILLLECGGNIFDAISIAVKAALFNTRIPKVRVLEDEEGTKEIE
LSDDPYDCIRVNVDEVPCIVTLSKIGYRHVVDATLQEEACSLASLLISVTSKGAITSMKK
VGKGSLDPESIFEMMETGQRVGKSLHIALQKILDEEENLGTSRTKVGFLG
NT seq 873 nt   +upstreamnt  +downstreamnt
atggcggccgtggtgctgagcgaggcggagaagctgtacatcgtgcacggcgtgcaggaa
gaccttcgtgtagatggtcgaggctgtgaagactacagatgtgcagaagtagaaacagat
gttgtatcaaacacaagtggatctgcaagagtaaagctgggagaaactgatatcttggta
ggcataaaagctgaaatggggacaccgaagttggagaaaccagatgaaggttacctggaa
ttttttgttgactgttcttcaaattctcctgagttggaaggccggggaggagaagaactt
ggcacagatatagcaaatacactgtacagagtattcagctgtgagaacagtgtagacttg
aaatccctttgtattaatcccaaggagcactgctgggttctctacgtggacatattgtta
ttagaatgtggtgggaacatctttgatgcaatctctatcgcagtgaaggcagctctcttt
aacacaagaatacctaaagtgcgtgttctggaggatgaagaaggcaccaaagagattgag
ctgtctgatgacccttatgattgtattcgagtcaacgtcgatgaggtgccctgtattgtc
acactaagcaaaattggatacaggcacgtggtggatgctaccctacaggaagaagcctgt
tctttggcaagcctgcttatttcggtgaccagtaaaggtgccatcacttcaatgaagaag
gtggggaaaggtagcctggatcctgagagtatttttgaaatgatggagacaggacaaaga
gtaggcaagtcacttcacatagcccttcagaagattttggatgaagaagagaatttgggg
acttcacgaacaaaagttggatttctaggatga

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