Cyanistes caeruleus (blue tit): 111923920
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Entry
111923920 CDS
T05602
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccae01009
]
111923920 (CTDP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111923920 (CTDP1)
Enzymes [BR:
ccae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111923920 (CTDP1)
Protein phosphatases and associated proteins [BR:
ccae01009
]
HAD phosphatases
Fcp/Scp phosphatases
111923920 (CTDP1)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111923920 (CTDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
NIF
PTCB-BRCT
BRCT
RTT107_BRCT_5
LIG3_BRCT
SpaA_4
Motif
Other DBs
NCBI-GeneID:
111923920
NCBI-ProteinID:
XP_023775644
LinkDB
All DBs
Position
2
Genome browser
AA seq
879 aa
AA seq
DB search
MKGLCAECGQDLTQIRSKNGKQSVPLSTATVSMVHSVPELKVSSEQAEQLGREDQQRLHR
NRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKL
YELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRDLFPCGDSMVC
IIDDREDVWKFAPNLITVKKYVYFQGIGDINAPPGSREMQMKKKANNSTKSEALDSTVIS
AKDVEEIKNVICVEEHSNGLKKTAKDTCTANGSTSVRSETSDGDVNSHDEVNAQNSLNDS
HKMDSEVTDDLANTKDAQIFSEQVDTTVREKQQTQEKTNDLDFELSSDSESDDGLDTKKS
STSVSDSENEEKRSWKKSEQPPQDENLQQESCTDASAEKDGLVNHSENTQSLPSENIQDK
IDLEAQEESEQESLCDLGNGSGDKKEAETESQISEQSGITMGESLDQSMEEEEEDDDTDD
DDHLIYLEEILVRVHTDYYTKYDKYLKKEIEEIPDIRKIVPELKSKVLADVTIIFSGLYP
TNFPIEKTREHYHATALGAKIVKNLVLGADDPDKATHLIAARTGTEKVRQAQDCKDLHVV
NPDWLWSCLERWDKVEEQLFPLKDDYIKTHSKEEVGQLSVNSPLQDSGMAKVTQDKKALF
HPTPIHPKSQPGPEVRIYDPNTGKLIRKGAQTSGQPMYIQSPAPPITLPVHGEHSSFRVV
QPHQQQMFEEDDLPASENEEQPGPSKRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGE
GSDESDTEKKKPEDKGEKPQTSATDNLGRKADQRPGSSSSSSSERSLTGSVPRGHKRKLD
EDDAASESSKESSNEDEEGSSSEADEMAAALEAELNDFM
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcttgtgtgcagaatgtggccaggatttaactcagatacgaagcaagaatgga
aaacagagtgtgccactatccacagcaactgtatcgatggttcacagtgtcccagagctg
aaagtcagctctgagcaagctgagcagctgggaagagaagatcaacagcgactacatcga
aatagaaaactggtgctcatggtagatttggaccagacattgatccatactacagaacag
cactgccagcaaatgtccaataagggaatatttcatttccagttaggtcgaggtgagcct
atgttgcacacacgtttgcgtcctcattgcaaggagttcctggaaaaaattgccaagctc
tatgaattacatgtttttacttttggcagcagactgtatgcacatacaattgcaggattt
ttggaccctgaaaagaagcttttttcccatcggatattgtcaagggatgaatgtatcgat
ccattttctaaaactgggaatcttagagatctctttccttgtggagattccatggtttgc
atcattgatgatagagaggatgtttggaagtttgcacccaatttgataactgtgaagaaa
tatgtatactttcaggggataggagatattaatgcacctcctggatcaagagaaatgcaa
atgaagaagaaagcaaacaactctacaaaatctgaggcattggattcgacagtgatttca
gcaaaagatgttgaagaaataaagaatgttatttgtgtagaagagcacagtaacggtctc
aagaaaactgcaaaggacacttgcactgcaaatgggagtacttctgtaaggagtgaaaca
tctgatggggatgtgaactctcatgatgaagttaatgcccagaactccttaaatgatagt
cacaaaatggacagtgaggtcactgatgatttggcgaatacaaaagatgctcagattttt
tcagaacaagttgatacaacagttagagagaagcagcaaacccaagagaagacaaatgac
ttggactttgaactgtctagtgacagtgaaagtgatgatggattggataccaaaaagtca
tccacttctgtatcagatagtgagaatgaggaaaagagaagttggaagaaatctgaacaa
cctccacaggatgaaaatttgcagcaggagagttgcactgatgcgagtgcagaaaaggat
ggtctggtgaaccattctgaaaacacacagtctttacctagtgaaaatattcaggacaaa
attgatcttgaagcacaagaggaaagtgaacaggaaagcctttgtgatttaggaaatggg
tctggagacaagaaagaagctgaaacagaatctcagattagtgaacagtctggaattaca
atgggtgagtccttagaccagagcatggaggaagaagaggaggacgatgatacagatgac
gatgaccatttaatatacctcgaggagatacttgtgcgagttcacactgattattacaca
aagtatgataaatacctgaaaaaagagattgaagaaattccagacatcagaaaaatagta
ccagaactaaaaagtaaagtcttggcagatgtaaccataatatttagtggactttacccg
acaaacttccctattgaaaagacacgggaacactatcatgccacagcacttggagctaaa
attgtgaagaatctcgtactgggtgctgatgatcctgataaggcaacacatcttattgct
gcaaggacaggcacagaaaaagtaaggcaagctcaggactgcaaggatctccatgttgta
aaccctgattggctgtggagctgcctggagcgctgggacaaggttgaggaacagctcttt
cccttaaaggatgactacatcaaaacacacagcaaagaggaagttggacagctatcagtt
aacagtcccctgcaggatagtggcatggctaaagtaactcaagacaagaaggctctgttt
cacccaacacccatccatccgaagtctcaacctggtcctgaagttcggatttatgatcct
aacactggaaagctgatcaggaagggcgcacagacatctgggcagccaatgtacatccag
tctccagctcctcccatcaccttgccagtccatggtgaacactcatccttcagagttgtt
cagccacatcaacagcagatgtttgaagaagacgacctaccagcaagtgaaaatgaagag
cagcctggtccatctaagaggaaacgccagccaagtatgtctgaaacaatgcccctgtac
actctgtgtaaagaggatttagagagtatggataaagaggtggatgacatcttaggagaa
ggcagtgatgaaagtgatactgaaaaaaaaaagccagaagacaaaggtgaaaaacctcag
actagtgcaacagataatctagggaggaaggctgatcagagacctggatcatcatcatcg
tcatcaagtgaaagaagtttaacaggcagtgtacccaggggtcacaagcgcaaactggat
gaagatgatgctgccagtgaatccagtaaagaatccagcaatgaagatgaggaaggaagc
agttctgaagcagatgaaatggcagcagcacttgaagctgagttgaacgacttcatgtga
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