Cyanistes caeruleus (blue tit): 111924651
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Entry
111924651 CDS
T05602
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccae04040
]
111924651 (TRPA1)
Ion channels [BR:
ccae04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111924651 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
111924651
NCBI-ProteinID:
XP_023776665
LinkDB
All DBs
Position
2
AA seq
1125 aa
AA seq
DB search
MKRSLLRLCRAREKAAAASAYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIDDSSCEVLNVMDSSGNTPLHWATKKNQVESVR
LLLSRGANPNILNSNMMAPLHMAVQSLHNEIVKILVQHSSTDVNLEGEAGNTPIMVACYK
DNPEALTLLIENGGKICKPNKTGCMPIHAAAFSGAKTCLEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGEESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKYLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAREGHAKAVRLLLDYGAKILFNKAVASFFHEAIHNRRKDV
VSAVILHKRWEEAVVTFSHYSSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNKKVKDGEEIFYEPLTTLNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTELYEARPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTYAQSPDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKTNVPNPSTEKNSFF
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgctgcggctctgccgggcgcgggagaaggcggccgcggccagcgcc
taccagggcgtcgtgtgcgaggcggatgccgcctccgtcgcctcgcaggatgtcttcaag
gttatttcagatggaagtgcctgcaggctacggagcttcattaagaagaatcgttctggg
cttaccaaagtggatgaattaaatgccaccccgctgcatcacgctgcagaaggaggacaa
atagaactaatgcagttgatcattgatgattcttcctgtgaagtattaaatgtgatggat
tcttctggaaataccccactgcactgggccacaaagaaaaaccaggttgaaagtgttcgt
ttgcttctcagcagaggagccaatccaaacattctcaactccaatatgatggcacctttg
catatggctgttcagtccctgcacaatgaaattgtgaagattttagtccaacatagcagt
acagatgttaacttggaaggtgaagcagggaacacacctatcatggtagcatgttacaag
gacaatcctgaagcactgacactcctgattgaaaatggaggaaaaatatgtaaaccaaac
aaaacaggatgtatgcctatccatgcagcggcattttcaggtgcaaaaacatgtctggaa
attcttttgaaaaaaggtgaagaactgggtcactctgctaaaacccacatcaattttacc
aataatgggaagtgcagtccacttcatttggcagttcagagtggcgacctagaaatgatt
aaaatgtgcattgaatttggagcccagattgatctaaaacagaatgaaaaatgcacagca
cttcactttgctgccactcaaggagcaacagagattgtaaagctaatgatgtcatcctat
gctggtgaggaatccattattgatgctgtagatgggaataaggaaacattgcttcacaga
acagcattgtttgatcattatgaactggcggagtatttgatttcaatgggggctaatatt
gatagtgttgacatagaaggtcgatccccacttctgctggccacttcctgcgcatcatgg
aaaattgtgaatttactgctttccaaaggagcaaatgtatcattaaaagatcatcttggt
cggaatttcttgcatttgaccgtattgcagcctggaggattacagcatctgaatgaaaaa
tatctgcagatggaacatattaaaaatcttgtcgtggatgaagataatgaaggatgcact
cctttgcattatgcatgcaggcaaggtgtggccctctctgtaaataatttactcagcctc
aacgtttccatctactctaagagcagggacaagaagtcaccattgcactttgctgccagc
tatgggcgcatcaatacttgtcaacgacttataagagatatgaaagacacaagacttctg
aatgaaggtgataagaagggaatgactccccttcacttggcagcccagaatggtcatgag
aaggtagttcagtttcttctgaagaggggggccctcttcctctgtgattataaaggctgg
acagccctgcaccatgctgccttcggaggatacactcgcacaatgcagatcattttggat
actaatgtgaagtgcactgacagagtggatgaagaagggaacacagctttgcacttggct
gcacgagaaggacatgcaaaagcagtgaggttacttcttgactatggtgcgaaaattctg
ttcaacaaagcagtagcttcttttttccatgaagcaatacacaataggagaaaagacgtg
gtgtctgctgtcattttgcacaaaagatgggaagaagctgttgtgacgttctctcactat
tccagtgccaataagtgtcctttgctggaaatggttgagtatcttcctgattcatttaaa
ctggtgttggacaactgcataattgagtcttcagaggaaaagacaagtcgagacttctat
attgaatataacttcagatatcttcagtgtcccctgacacttaacaagaaagtaaaggat
ggtgaagaaattttctatgaaccacttaccactctaaatgccatggtacgccacaatcgc
atggagctactcagtcatcctgtgtgtaaagaatatttgcttatgaaatggatggcctat
ggatttcgagcacatctaatgaatttaggcatatattctcttggtctcatcccactgact
cttctggtcactcacatacaaccaggaagacctttgaatggaacagagctctatgaagcc
agaccattagaatatgaggattcatacttcacaagggtgtgtatgtgtttagttttaatt
atgagtttactgggcatctgcaaagaaatatttcagctaattcagcagaaattgaaatat
ttgttggattactccaatctcctggactggaccatttatactacaagcataatttttgtg
tcttctttatttattaatacaccagctcatttgcagtgggaatgtggagcaattgctgta
tatttgtcttggatgaacttcctgctttatcttcaacgatttgagaactacggaatctat
gttgtgatgttctgggaaattttgaggactttgattcggattgctgtggttttctttttc
ctgatactggcttttgggctgagtttctttgttcttttgggttcacagcaaacatacagc
acacctctgctttctgtaatgaagacatttgcaatgatgctgggagacattaattaccat
gatgcattccttgatcccttactaagcagtgaattgccatatccattcctgagttacaca
gtcctcattatattcaccttgcttattccaatcctgcttatgaacttgctaattggtttg
gctgttggtgatatcgctgaagtacagaaatatgctgcactcaaaaggattgcaatgcag
gttaaccttcacaccaacttagagaagaagctgccattttggttcttaagtcgggtggac
caggaatcaatcactgtatatcccaacaggccaagatactgtggatttatgagtgtgttc
caatattgctttgggtgtgaagactctaccacatatgcacagagccctgatacaacactg
gaattggaagttctgaagcagaaatacaggctcaaagatatatcaacattgttggaaaag
caacatgacctcattaaactgattatccaaaaaatggagatcgtgtcagaggctgaggat
gaagacagcaatgatttatttcagcacaaatttaggaaaaggcagctagagcacaaaaat
agtaaatgggatacagtgttaaaagctgttaaaacaaatgtgcctaacccaagcacagaa
aagaacagcttcttctag
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