Cyanistes caeruleus (blue tit): 111925585
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Entry
111925585 CDS
T05602
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111925585 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111925585 (SMARCC1)
03036 Chromosome and associated proteins [BR:
ccae03036
]
111925585 (SMARCC1)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111925585 (SMARCC1)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111925585 (SMARCC1)
PBAF complex
111925585 (SMARCC1)
GBAF(ncBAF) complex
111925585 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
BRCT
SpeFL
Motif
Other DBs
NCBI-GeneID:
111925585
NCBI-ProteinID:
XP_023777855
UniProt:
A0A8C0UQP3
LinkDB
All DBs
Position
2
AA seq
1002 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDMELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHANELDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEDTVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTFGLESSCIAGTGPDEP
DRMDGAEEEKMETETEGQAAEKVENKAESESEEGEKVPEGESERSGEKEPESEGAAEPKP
EEKEAEENKENVDGSKDKEAEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYA
ELRARQQMEQQHSQNPQQPHQHPSGPGMAPLGTPAHPGLLPHQQPPPYPMMHHQMPPPHP
PQPGQMLPGQPMAGRMMSSSIHPSPGAAPPGSTPPLGHPMAGNLIGPRVPLAAPNGMCKC
PGVILGFLCCWKHPGVILGFLHSWKLPGVILGFLHSWKNSLG
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggaggaggtttgacctgcagaatccctcccgcatggatcgcaacgtg
gagatgttcatgaacattgagaaaacactggtgcagaacaactgtctgagcagaccaacc
atctacctcattcctgacatggagctgaagctggccaacaagctgaaggacattgtcaag
cgtcaccagggaacagtcactgaagagaaatccaaggccacccaccatgtgtatccaagt
cctacctcaatggatgatgatgagtggttgagacctgtgatgaaaaaggacaagcaggtg
ctggtgcactggggcttttttccagacagctacgacacctgggtccacgccaacgagctc
gacgcggagatcgaagatcccccgattcccgagaaaccctggaaggttcacgccaagtgg
attttggacaccgatgtgttcaatgagtggatgaatgaagaggattatgaggtggatgag
aacaggaaatccgtgagttttcgccagaggatctccatgaagaatgaagagcccgtgcgg
agccctgagaggagggacaggaaagcagcagccagtacaaggaaaaggaaacattcccct
tctccaccccccactcctgtggagtccaggaaaaagacagggaagaaaggccaagcagct
ctctatgggaaaaggagggggcagaaggaagaggatgagcaggaggatctcaccaaggac
atggaggaccccaccccagtgcccaacatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaggacagtgagaacacgcccgtgaaaggaggaaccgtggcagacctggatgag
caggatgaggacacagtggcgactggagggaaggaggacgaggaccccaacaagggtgac
cagagccgctccattgaccctggggaggacaatgtcaccgagcagaccaaccacatcatc
atccccagctacgcctcctggttcgactacaactgcatccacgtgatcgagcgtcgcgcg
cttccggaattcttcaatgggaaaaacaagtccaagactccagaaatatacctggcctac
aggaacttcatgatcgacacgtaccgcctgaacccgcaggagtacctgaccagcacggcc
tgcaggaggaacctcaccggcgacgtctgcgccgtcatgagggtccacgccttcctggag
cagtgggggctcatcaactaccaggtggatcccgagagccgccccatggccatggggccc
cccccgaccccccacttcaacgtgctggccgacaccccctcggggctgatgcccctgcac
atccgcaccccgcaggttccagctgcccagcaaatgctgagcttccctgagaagaacaag
gagaagccaactgacctgcagaactttggccttcgcacagacatctactccaaaaagact
ttggccaagagtaaaggggcgagtgctggcagagagtggacagagcaggagacactgctg
ctgttagaggctctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggc
agccgcacgcaggacgagtgcatcctgcacttcctgcgcctgcccatcgaggatccctac
ctggagaactcggacgcctcgctgggacccctggcctaccagcccgtgcccttcagccag
tctggcaaccccgtcatgagcaccgtggccttcctggcctccgtggtggatccgcgcgtg
gcctcggctgcggccaaggctgccctggaggagttttcccgggtcagagaggaggtgccc
ctggagctggtggaagcccacgtgaagaaggtgcaggaagcagctcgagcctcggggaag
gtggatccaacctttgggctggagagcagctgcatcgcgggcaccggccccgacgagccc
gacaggatggatggagccgaggaggagaagatggaaacggagacagagggacaggcggcc
gagaaggtggagaacaaagccgagagcgaatctgaggagggagagaaggtcccggaaggg
gaaagcgagcggagcggggagaaggagccagagagcgaaggggctgcagagcccaagcca
gaggaaaaggaggcagaggagaacaaggagaacgtggatggcagcaaggacaaagaggcc
gaggctgggaagaagaaagtggaacacgagatctcggaagggaacgtggccacagctgca
gctgctgccttggcctctgctgccaccaaagccaagcacctggcagctgtggaggagagg
aaaatcaagtccctggtggctcttctggtggagacccagatgaagaagctggagataaaa
cttcgccattttgaggagctggaaaccatcatggaccgggagaaagaggcactggagcag
cagaggcagcagctgctgacggagcgccagaacttccacatggagcagctcaagtacgcc
gagctaagggctcgccagcaaatggagcagcagcacagccagaacccccagcagccccac
cagcaccccagcgggcctggcatggcccctctggggacaccagcccaccctgggctgctg
ccccaccagcagcccccgccataccccatgatgcaccaccagatgccacctcctcaccca
cctcagccaggtcagatgctccctggacagcccatggcaggcaggatgatgtcctccagc
atccaccccagccctggggctgccccacccggcagcaccccaccgctggggcaccccatg
gccgggaacctcatcgggccccgcgtgccgctggcagctcccaacggaatgtgtaagtgt
cctggggtgatcctggggttcctctgctgctggaaacatcctggggtgatcctggggttc
ctccactcctggaaactccctggggtgatcctggggttcctccactcctggaaaaactcc
ctggggtga
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integrated database retrieval system
