Cyanistes caeruleus (blue tit): 111925762
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Entry
111925762 CDS
T05602
Symbol
SYNCRIP
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Q isoform X1
KO
K13160
heterogeneous nuclear ribonucleoprotein Q
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccae03041
]
111925762 (SYNCRIP)
Spliceosome [BR:
ccae03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
111925762 (SYNCRIP)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
RRM_1
hnRNP_Q_AcD
RRM_7
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111925762
NCBI-ProteinID:
XP_023778060
LinkDB
All DBs
Position
3
AA seq
562 aa
AA seq
DB search
MATEHVNGNGTEEPMDTSAAVTHSEHFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
AIEALKEFNEEGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
EAKIKALLERTGYTLDVTTGQRKYGGPPPESVYSGQQPSVGTEIFVGKIPRDLFEDELVP
LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
ANNRLFVGSIPKSKTKEQIVEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
QARRRLMSGKVKVWGNVVTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYAQRGGPGSARGVRGARG
GAQQQRGRGQGKGVEAGPDLLQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggctactgaacatgttaatgggaatggtactgaagagcccatggatacttctgctgca
gttacccattctgagcatttccagacattgcttgatgctggtttaccacagaaagttgct
gaaaaactagatgaaatttacgttgcagggctagttgcacatagtgatctagatgaaaga
gctattgaagctttaaaggaattcaatgaagagggtgcactagcagtgcttcagcagttt
aaagacagtgatctctcacatgttcagaacaaaagtgcctttttatgtggagtcatgaag
acatacaggcagagggaaaaacaggggaccaaggtggcagattctagcaaaggaccagat
gaggcaaaaattaaggcactgttggagagaactggctacactcttgatgtgactactgga
cagaggaagtatggtgggcctcctccagagtctgtatattcaggacaacaaccttctgtt
ggtacagagatatttgtgggcaagattccgagagacttgtttgaagatgaacttgttcca
ttatttgagaaagctggacctatatgggatctccgcttaatgatggatccactaactggt
ctaaacagaggctatgcttttgtcactttttgtactaaagaggcagctcaggaagctgtt
aaactgtacaacaaccacgaaattcgttctggaaaacacattggcgtatgcatctctgtt
gccaataataggctttttgttggctctattcctaagagtaaaaccaaggagcaaattgtt
gaagaattcagcaaagtaacagagggtcttacagatgtcatattgtatcatcagcctgat
gacaagaaaaagaatcggggtttctgctttcttgaatatgaagatcacaaaactgctgct
caggccagacgtaggttaatgagtggcaaagtgaaagtctggggaaatgttgtcacagtg
gaatgggctgaccctatagaagacccagatcctgaagtcatggcaaaggtaaaagttttg
tttgtacgcaatcttgccaatacggtaacagaggagattctagaaaaagccttcagtcaa
tttggaaagctagaacgagtgaagaagctaaaagactatgctttcattcattttgatgaa
cgggatggtgctgtaaaggcgatggaagaaatgaatggcaaagatttagagggagaaaac
attgaaattgtttttgctaagccaccagatcaaaaaagaaaagaacggaaagctcagaga
caagcggctaaaaatcagatgtatgatgattactactattatggtccacctcatatgccc
cctccaacaagaggtcgaggccgaggaggtagaggtggttatggatatccccctgactat
tacggatatgaagattattatgattattatggctatgactaccataactatcgtggtgga
tatgaagatccttactatggttatgaagattttcaagttggagctagaggaaggggtggt
agaggagcaaggggtgctgctccatccagaggtcgcggggctgctcctccccgtggcaga
gccggttatgcacagagaggtggtcctggatcagcaagaggcgttcgtggtgcgagagga
ggtgcccagcaacaaagaggccgcgggcagggaaaaggggtcgaggccggtcctgacctg
ttacaatga
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