Cyanistes caeruleus (blue tit): 111926310 Help Entry 111926310         CDS       T05602                                  Symbol MSH2 Name (RefSeq) DNA mismatch repair protein Msh2   KO K08735   DNA mismatch repair protein MSH2 Organism ccae  Cyanistes caeruleus (blue tit) Pathway ccae03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ccae00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     111926310 (MSH2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ccae03400]     111926310 (MSH2) DNA repair and recombination proteins [BR:ccae03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      111926310 (MSH2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_IV MutS_II AAA_27 MutS_I DUF6437 CCDC-167 Motif Other DBs NCBI-GeneID:  111926310 NCBI-ProteinID:  XP_023778725 UniProt:  A0A8C0VFH2 LinkDB All DBs Position 3 AA seq 851 aa AA seqDB search MNFESFVRDLLLVRHYRVEVYKNKAGSKSVKENDWYLAYKGSPGNLSQFEEVLFANNDMS TAIGVVGVKLSAADGQRVVGVGCVDTTLRKLSVCEFPDNDQFSNLEALLVQLGPKECVLP GGETTGEMGKLRQVIQRGGILITDRKKADFTTKDIVQDLNRLLKSKKGEQMNSAALPEME KQVAVSSLSAIIKFLELLSDESNFGQFELTTFDLSQYMVLDNAAVQALNLFQSSVENANT AQSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTRIEERLNLVEAFVMDPELRQCLQEDLLR RFPDLNRLAKKFQRQAANLQDCYRMYQAINQLPNVVEALEKHEGAHQMLLLAVFITPLTD TCSDFSKFLEMIETTLDLEKVENHEFLVKASFDPNLTELREKMNELEEKMQSLLKTAAKE LGLEAGKSIKLETNSQFGHHFRVTCKEEKALRNNSKYGIIDTQKNGVKFTNSKLSAINDE YIRNREEYEEAQDAIVKEIINIASGYAEPMQTMNDVIAQLDAIVSFAHVSNAAPVPYVRP VILEKGQGRIVLKGARHPCIEVQDEVAFIPNDITFEKGKQMFHIITGPNMGGKSTYIRQT GVIVLMAQIGCFVPCESAEITIVDCILARVGAGDSQLKGVSTFMAEMLETASILRTATEN SLIIIDELGRGTSTYDGFGLAWAISEYIASKICGFAMFATHFHELTALAEQVPTVNNLHV TALTSDDTLTMLYRVKEGVCDQSFGIHVAELAAFPKHVIESAREKALELEEFQNIGKSKE SEGEPPAKKSYREREEGEKIIQDFLCQVKALPLTDMSEEDIKVKLKQLRNDVLAKKNSFV NEIISRTKVTS NT seq 2556 nt NT seq  +upstreamnt  +downstreamnt atgaactttgaatcttttgtgagggacctccttctggttcgtcattacagagttgaagtt tacaagaacaaagcagggagcaaatctgtcaaagaaaatgactggtatttagcttacaag ggttctccaggaaatctttcccagtttgaggaagttctctttgccaacaatgatatgtcc acagccatcggggttgtgggggttaagctgtctgctgctgatggacagagagtagtagga gtgggctgtgtcgacaccacgctgagaaaattgagtgtttgtgagttcccagataacgat cagttctccaaccttgaagctctactggttcaactgggcccgaaggagtgtgtgctgcca ggaggagagactacaggagagatgggaaaactcagacaagtcattcagagaggaggaatc ctgattacagacaggaagaaggcagatttcacaacaaaagatattgttcaggatctcaat cgcctgttgaaatccaaaaaaggagagcagatgaatagtgcagcactgccagagatggaa aagcaggttgctgtttcatctctgtcagccattatcaagtttttggagttgctgtcagat gagtctaattttggacagtttgaactgactacttttgatcttagtcaatatatggttcta gacaatgcagctgttcaagccctcaacctttttcagagttctgtggaaaatgcaaatact gcacagtctctagctggtttactgaataaatgcagaacccctcaaggacaaagactagtt aatcagtggatcaaacaaccacttatggacaagaccagaattgaagaaagattgaatttg gttgaagctttcgtgatggatccagaactacgtcagtgccttcaagaagatctgttacgt cgctttccagacctcaaccggctggcaaagaaatttcagagacaagcagcaaacttacaa gactgttaccgaatgtaccaggctatcaatcaactgcctaatgttgtagaagcactagaa aaacatgaaggagctcaccagatgttgttgttggctgtatttataacacctcttactgat acctgctctgacttctcaaagtttctggagatgatagaaacaacattggacttggaaaag gtggaaaatcatgaatttcttgtcaaggcttcttttgatcctaatttaacagaattaaga gagaagatgaatgagctggaagaaaaaatgcagtccttactaaagactgcagcaaaagag ctaggtttggaagctggcaaaagtatcaaacttgagacaaattcacagtttggacatcac tttagagtaacttgtaaggaggaaaaagctctccgtaataattcaaaatacggaatcatt gatacacagaagaacggtgtgaaatttactaacagcaaactgagcgccatcaatgatgaa tatataaggaacagggaagagtatgaagaggctcaggatgcaattgttaaggagatcatt aacattgcttcaggttatgcagagcccatgcagacgatgaatgatgtgatagctcagctg gatgccattgtcagctttgcccacgtgtcgaacgcagccccggtgccctacgtccggccc gtcatcctggagaagggacagggcaggatcgtgctgaaaggtgccaggcatccctgcatc gaagtgcaggacgaggtggccttcatccccaatgacattacatttgagaagggcaagcag atgttccacattattactggccctaacatggggggaaaatccacatacatccgacagaca ggggtgattgttcttatggcccaaattgggtgttttgtgccgtgtgagtctgcagaaata accattgtggattgtatcctggctcgggtgggagcaggagacagccagctgaaaggagtg tctactttcatggctgaaatgctggagactgcttcaatcctcaggacagcaactgaaaac tccctgataatcattgatgagctgggaagaggaacttccacctacgatggctttggctta gcatgggctatctcagaatacattgccagcaaaatctgtgggtttgccatgtttgctaca cacttccatgagctcacagctcttgctgagcaagtgccaacagtaaataacctccatgtc actgctctgaccagtgatgacacactgacaatgctttatcgtgtcaaggaaggtgtttgt gaccagagttttggaatacatgtagcagagttggcagctttcccaaaacatgtgattgaa agtgcaagagagaaggcattggagctggaggagtttcaaaatattggcaagtccaaggaa tctgaaggagaaccaccagccaagaaatcatacagagaaagagaggaaggtgaaaagata attcaggattttctttgtcaagtgaaagcattgcccctgacagatatgtcagaggaagac atcaaagtcaagttgaagcagctgagaaatgatgtgctggcaaagaagaacagttttgtg aatgaaataatttcccgaacgaaagttacatcatga

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