Cyanistes caeruleus (blue tit): 111926406
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Entry
111926406 CDS
T05602
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111926406 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111926406 (PNPT1)
03016 Transfer RNA biogenesis [BR:
ccae03016
]
111926406 (PNPT1)
Enzymes [BR:
ccae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
111926406 (PNPT1)
Messenger RNA biogenesis [BR:
ccae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
111926406 (PNPT1)
Transfer RNA biogenesis [BR:
ccae03016
]
Prokaryotic type
tRNA degradation factors
111926406 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
OAF_N
Motif
Other DBs
NCBI-GeneID:
111926406
NCBI-ProteinID:
XP_023778848
LinkDB
All DBs
Position
3
AA seq
703 aa
AA seq
DB search
MVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRELGSTDKEILTSRVIDRSIRP
LFPAGYFYDTQILCNLLAVDGVNDPDVLAINGASAALALSDIPWNGPIGAVRVGLVDGET
VINPTRKEMASSALNLVVAGAPQSQVVMLEATAENILQQDFCHAIKVGVKQTQQIIQGIQ
QLVKEQGVVKRTVQKLFIAPEEIVELARKLASNKIYAVFTDSSHDKISRDEAINKIRLET
EEQLKEKFPEAEPYEIMESFNVVSKDIFRNLVLSEYRRCDGRDLTSLRDIKCEVNMFKML
HGSALFQRGQTQVLCTVTFDSLESSVKSDVISTAVSGIKDKNFMLHYEFPPYATNEIGKV
TGMNRRELGHGALAERALKPVIPQDFPFTIRVTSEVLESNGSSSMASACGGSLALMDAGV
PVSNAVAGVAIGLVTKCAQGKGDIEDYRLLTDILGIEDYYGDMDFKMAGTNKGITALQVD
LKLPGIPIKIVVEAIQQATAAKREILQIMNQTLAKPRPNRKESGPVVETIHVPLSKRLRF
VGPGAYNLKKLQAQTGVTVSQLDEETYSVFAPTPGAMHEAREFIGEICKDDQEVNLEFGA
IYTATITEIRDSGVMVKLYPNMTPVLLHNSQLDQRKIKHPSALGLEVGQEIQVKYFGRDP
TDGRMRLSRKILQSPASSTLKTLTDKNSIVLGGAVPQTSTSSQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggtcacagcagtcagcaaaaccaagccctctccatctcagtttatgcccttagtggtt
gactaccgacagaaagctgctgcagcaggaagaattcctacaaactatctaagaagagag
cttggttccactgataaagaaattcttacaagcagagtaatagatcggtcaatcagacca
ctcttccctgcaggctacttttatgatacacagatcctttgtaatcttttagcagtagat
ggtgtcaatgatcctgatgttctggcgattaatggagcttctgcagcacttgccttgtct
gatatcccctggaatggtcctattggtgcagtgagggtaggactggtggatggagagact
gttatcaatccaactcgaaaagagatggcctctagtgctctaaatttagttgttgctgga
gctccacaaagccaagttgtgatgttggaagcaactgctgagaacatcttgcagcaagac
ttctgccatgccatcaaagtgggggtgaagcagacccagcagatcatccagggcattcag
cagctggtgaaggagcagggcgtggtcaagagaactgtccagaaattatttattgctcct
gaagagatcgtggaacttgcaaggaaacttgcttctaacaagatctatgcagtgttcaca
gattcaagccatgataaaatttcgagagatgaggcaatcaacaaaataaggctcgaaaca
gaagaacagctgaaagaaaaatttccggaggctgagccttacgaaatcatggaatctttc
aatgtggtttcaaaggatatttttagaaatcttgtgctaagtgaatatagaaggtgtgat
gggagagatttgacttccctcagagacattaaatgtgaagtgaacatgttcaaaatgctt
catggatcagccttatttcaaagaggtcaaacacaggttctgtgtacagttacatttgac
tctctagaatcaagcgtaaaatcagatgttatctccacagcagtgagtggaataaaagat
aaaaacttcatgctgcattatgagtttccaccttatgcaaccaatgagattggcaaagtt
actgggatgaacagaagagaacttggacatggtgcactggcagaacgagctttgaaacca
gttataccccaggatttcccattcacaatccgagttacttctgaagtcttggaatcaaat
gggtcctcctcaatggcttctgcgtgcggtggaagtttggcactaatggatgcaggagtt
ccagtgtcaaatgcagtggcaggtgtagccataggcctcgttaccaagtgtgctcaggga
aaaggggatattgaggactatcgcctgctgacagacatcctgggaattgaggattactat
ggagatatggatttcaagatggcaggcaccaataaagggataacagcactgcaggttgat
ctcaagctgccaggaataccaataaaaattgtagtggaagctattcagcaagctacagct
gcaaagagggagattttacaaattatgaaccaaacactggcaaaacccagacctaacaga
aaagaaagtggaccagttgtagaaactatccacgttccattatcaaaaagattaagattc
gttggtcctggggcttataatttgaagaagcttcaagctcagactggagtgactgtaagt
cagctggatgaggagacatattctgtgttcgcccccacgccgggggcaatgcacgaagcc
agggaattcatcggggaaatctgcaaagatgatcaagaagttaatttggaatttggggca
atttatacagccacaattactgaaataagagattctggagtgatggtaaaactctaccca
aacatgaccccagtattacttcataattcacagctggatcaaagaaagattaaacaccct
agtgccctgggactagaagttggacaagaaattcaggtgaaatactttggccgtgatccc
actgatggcagaatgaggctttcacgtaaaattctgcagtccccagccagcagcaccctg
aaaaccctgacagacaaaaacagcattgtcctgggaggggctgttccacagacatccacc
tcatcccagtga
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