Cyanistes caeruleus (blue tit): 111926610
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Entry
111926610 CDS
T05602
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111926610 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111926610 (POLR1B)
Enzymes [BR:
ccae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111926610 (POLR1B)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111926610 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
zf-piccolo
Motif
Other DBs
NCBI-GeneID:
111926610
NCBI-ProteinID:
XP_023779096
LinkDB
All DBs
Position
3
AA seq
992 aa
AA seq
DB search
MPQGTIKQPLGYIPIMVKSKLCNLCGFSPQDLMQHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLAMTRHKWKNRGPGFTEYGKLSSFCSILLTTAGGQTGVTICGSVSQALVNFPDY
QIFEELVKGREDDTFYVNCVTEMMRAVVDAGCLTQQNVLDYLGKSFRVKLNLPEWYSNEQ
AADFILSNCICIHLTNRTEKFYLLCMMTQKLYTFAKGECMEDNPDSLMNHEVLTPGQLFL
MFLKERLETWLQSVRFVLEKKAEKANINLNTDSLVKAFGMAPDFTKPFEYLLATGNLRSK
TGLGMLQDSGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTTTVRKLLPESWGFLCPVDT
PDGEPCGLMNHMTALCEIVTEMVPVTDIPPLLCSLGVTPIDAAPSQPYSECYRVVLDGSM
VGWVERELAPEIAETLRHFKITQEKRFPARAEVVLIPMTGKPSLYPGLFIFTNPCRMVRP
VRNLSYGKNEWIGTLEQIFMNVATMESEVVPGVTTHQELFPHSILSVVANLIPFSDHNQS
PRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRPSMYDYYGMDSYPVGTNSI
VAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKVESIDLSLKASRAGDNLVFGIRPNDPN
AGEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYPSKEVGIVDNVRLCSNDRGTG
KFKKACITVRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPFTENGMVPDILFNPHGFPS
RMTIGMLIESMAGKSAALHGVSYDATPFTFTEKKSALKYFGETLASAGYNFFGTEKMYSG
ISGVELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQPVKGRNVEGGIRFGEMER
DALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSLTSPVLEKLSQSSVTSSRRYSCSLCSQ
VDTIEVVPVPHVFRYFVAELAAMNIKTKLNVE
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagggactatcaaacagccattagggtatattccaatcatggtgaagtccaaa
ttgtgcaacctctgtggtttttctccacaagaccttatgcagcaccatgaggaggaagag
gaaatgggaggctactttataatcaatggattagaaaaagtaatcaggatgctgattatg
cccaggcgaaacttcccgcttgcgatgacaagacacaagtggaaaaacagaggccctggt
ttcacagagtatggtaagctcagcagtttctgcagcatcctactaacaactgctggagga
caaacaggagtgaccatctgtggctctgtctctcaggcattagttaacttcccagactac
cagatttttgaagagctggtgaaaggaagggaagatgacaccttttatgtgaactgtgtt
actgagatgatgagagcagtggtggatgccggctgtttgacacagcaaaacgtcctggat
tacctgggaaagagcttcagagtgaaactcaacctgcctgagtggtacagcaatgaacag
gctgcagatttcattctgagcaattgtatctgcattcacctgaccaatagaactgagaag
ttctacctgctctgtatgatgacccagaagctctatacttttgccaaaggagagtgcatg
gaggataatccagacagtctcatgaatcacgaggtgcttaccccaggacagcttttcctt
atgttcttaaaggagaggcttgaaacctggctgcaatctgttaggtttgttttggagaaa
aaagcggaaaaagcaaatatcaacctaaatacagacagcctggtgaaggcatttggcatg
gcaccagacttcaccaagccatttgagtatctgcttgcaactggtaacctgcggtctaaa
acagggctgggcatgttgcaggacagtggtctctgtgtggtgggggacaagctgaatttc
atccgctacctctcccacttccgctgcatacacagaggggcagcgttttcccagatgaga
accacgactgtccgcaagctgctgcccgaatcctggggcttcctgtgccccgtggacacc
ccggatggagagccctgtgggctgatgaaccacatgacagctctgtgtgaaatcgtcacc
gagatggtgcctgtgacagacattccacctttgttatgttccctgggtgtcacccccatt
gatgcagctccaagccagccttactcagagtgctacagagttgtgctggatggctccatg
gtgggctgggtagagagggagttggctcctgagattgcagaaactctccgccatttcaag
ataacacaagagaagagatttcctgcacgggcagaagtggtccttatcccaatgacagga
aaacccagcttgtatcctgggctgttcattttcactaacccttgccggatggtgcggcct
gtcaggaacctatcctatggaaaaaatgaatggattgggactctggaacagatcttcatg
aatgtggcaacaatggagtcggaggtggtgcctggagtgaccactcaccaggaactcttc
cctcacagtattctgagcgtggtggccaatctcattcccttctccgaccacaaccaaagt
ccacggaacatgtaccagtgccagatgggaaagcagaccatggggtttcctgtttacaac
tacaaggatcgctcggataacaagctgtaccacctgcacaccccccagagccctctggtg
aggcccagcatgtatgactattatgggatggacagctatcctgttggcaccaactccatc
gtggctgtcatctcctacagtggctatgacatggaagatgcaatgattgtaaataaatct
tcctggcagagaggatttgcttatggaagtgttatcaaggtggagagcattgacctttcc
cttaaagccagcagggcaggcgataatttagtatttggcatcaggcctaacgatccaaac
gcaggggagaagctggatgctgatggactgccttttgttgggtctatcctgcagcctggg
gaccccttctacagcttcatgaacctcaacacaggggagaccttcactgtgtactatccg
agtaaagaagtgggcattgtggacaacgttaggttgtgcagcaatgaccgtggcactggg
aagttcaagaaggcttgcatcactgtgagggttccccgaaatcccactgttggagacaaa
tttgccagccgtcacggacagaaaggcatcctaagccagctctggcccgtcgaggacatg
cccttcacagagaacgggatggttccagacatcctcttcaaccctcacggctttccctcc
cgcatgaccattgggatgttaattgagagcatggcggggaagtcagcagccctgcatggg
gtctcctatgatgccactcccttcaccttcaccgagaagaagtctgctctgaaatacttc
ggtgagactttagcgagtgcgggttacaacttctttgggacagagaagatgtacagcggc
atcagcggggtggagctggaggcagagatcttcgtgggcgtggtgtactaccagcgtctg
cgccacatggtctctgacaagttccaggtgaggaccacggggccccgagatgctgtcacc
aaccagcctgtcaaggggaggaatgtggaaggtgggatccgcttcggcgagatggagcgg
gatgctctgctggcccatggcacgtccttcctgctgcaggaccgcctgttcaactgctct
gacggctccgtagcctacgtgtgcacaagctgcggcagcctgacatcccctgtgctggag
aaactgtcccagtcctctgtgaccagcagcaggaggtattcctgctccctctgcagccag
gtggacaccatcgaggttgtccctgtgccccatgtcttccgctactttgtggctgagctg
gcagccatgaacataaaaacaaagctcaatgtggagtag
DBGET
integrated database retrieval system
