Cyanistes caeruleus (blue tit): 111926649
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Entry
111926649 CDS
T05602
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03013
Nucleocytoplasmic transport
ccae03015
mRNA surveillance pathway
ccae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111926649 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
111926649 (EIF4A3)
03015 mRNA surveillance pathway
111926649 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111926649 (EIF4A3)
03041 Spliceosome [BR:
ccae03041
]
111926649 (EIF4A3)
03009 Ribosome biogenesis [BR:
ccae03009
]
111926649 (EIF4A3)
03012 Translation factors [BR:
ccae03012
]
111926649 (EIF4A3)
Enzymes [BR:
ccae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111926649 (EIF4A3)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111926649 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
111926649 (EIF4A3)
Spliceosome [BR:
ccae03041
]
Complex C
Other components
EJC/TREX
111926649 (EIF4A3)
Ribosome biogenesis [BR:
ccae03009
]
Eukaryotic type
90S particles
Helicases
111926649 (EIF4A3)
Translation factors [BR:
ccae03012
]
Eukaryotic type
Initiation factors
eIF-4
111926649 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
111926649
NCBI-ProteinID:
XP_023779134
LinkDB
All DBs
Position
3
AA seq
359 aa
AA seq
DB search
LAPAGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALIL
APTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIR
RRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKF
MTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDW
LTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINY
DLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
ttggcccccgcagggttcgagaagccgtcggccatccagcagcgagccatcaagcagatc
atcaagggcagggacgtgatcgcacagtcacagtcgggaacagggaagacagcaacattc
tccatatctgtcctacaatgcctggatatacaggttcgcgagacccaagccttgatcctg
gcaccaactcgggagctggctgtgcagattcagaaggggcttctggcactgggagactac
atgaatgtgcagtgccacgcctgcatcgggggcaccaacgtgggagaggatatccgcaaa
ctggattatgggcagcacgttgtggctggcactccaggccgggtgtttgatatgattcgt
cgcagaagtctaagaactcgtgccatcaaaatgctggttttggatgaagcagatgaaatg
ctcaataaaggcttcaaggagcagatttatgatgtgtacaggtacctgcctccagccaca
caggtggttctgatcagcgccactttgccacatgaaatcttggaaatgaccaacaaattc
atgacagaccccatccgcatcctggtgaaacgtgatgagttgaccctcgaaggaatcaag
cagtttttcgtggctgtggagagggaagagtggaagtttgacaccttgtgtgatctctac
gacacgctgaccatcacccaggctgtcatcttttgtaacaccaagagaaaggtggactgg
ctcacagagaagatgagggaagccaacttcacagtttcatccatgcatggggacatgccc
caaaaggagagagagtccatcatgaaagagttcagatctggcgcaagccgagttcttatt
tccacagacgtttgggctcggggcctggatgtgcctcaggtgtcgctgatcattaactac
gacctgcccaacaacagagaactctacatacacagaatcggccgctcaggcaggtacggc
cggaaaggcgtcgccatcaactttgtgaagaacgacgacatccgcatcctgcgggacatc
gagcagtactactccacccagatcgacgagatgcccatgaacgttgctgatctgatctga
DBGET
integrated database retrieval system
