Cyanistes caeruleus (blue tit): 111926783
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Entry
111926783 CDS
T05602
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccae03041
]
111926783 (DDX1)
03016 Transfer RNA biogenesis [BR:
ccae03016
]
111926783 (DDX1)
Enzymes [BR:
ccae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111926783 (DDX1)
Spliceosome [BR:
ccae03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111926783 (DDX1)
Transfer RNA biogenesis [BR:
ccae03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
111926783 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
111926783
NCBI-ProteinID:
XP_023779257
UniProt:
A0A8C0UZW1
LinkDB
All DBs
Position
3
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDTEKGQIKFSKNGKDLGLAFDIPPHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYVGLCKAPESSVVKSQHSGNAQVVQAQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKIN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttctcggagatgggtgttatgcctgagatagctcaagcagtggaggagatg
gactggcttctccctacggatatccaagcagaatccatcccgttgatcctgggaggtggc
gatgtactgatggctgctgaaactgggagtggaaaaactggtgctttcagcattccagtt
atccagattgtttatgaaacattgaaagaccaaatggaaggcaagaaaggaaaagccact
attaaaactggaggggcagtgctcaataaatggcaaatgaacccctatgacagaggatca
gcttttgcaattggatcagatggtttgtgttgtcaaagcagagagattaaagaatggcat
ggatgcagagcaactagaggtgtgactaaagggaaatactattatgaagtttcttgtcat
gaccaaggcttgtgcagagttggttggtcaactatgcaggcttcattggacctgggcact
gataaatttggctttggctttggtggcactggtaagaaatctcacaacaagcaatttgac
agctatggtgaggaattcactatgcatgatacgattgggtgttatctagacacagaaaaa
ggacaaataaaattttccaaaaatgggaaggaccttggccttgcatttgatatcccacca
catataaggaaccaagcactttttgcagcttgtgtactgaagaatgctgaattgaaattc
aattttggagaagaagatttcaagtttccaccaaaagatggctatgttggtctctgcaag
gctcctgagagcagtgttgtaaaatcacagcactcaggaaatgcacaagtggttcaagca
cagaaccttccaaatgctccaaaagcattgattgtagaaccatcaagagagctggcagaa
caaactttgaacaatgtgaagcagttcaaaaaatacgttgataatcccaagttaagggaa
ctgctaattattggtggagttgctgcaagagatcaactctctgtactggaacaaggtgtg
gatattgttgttggaactcctggaaggctggatgacctggtctcaacagggaagattaat
ttatctcaagttagattcctggttctggacgaagctgatggccttctcctccaaggttat
tcagatttcataaacaggatccacagtcaaattcctcagataacctcagatggaaagaga
cttcaggtgattgtgtgctctgcaacattgcattcttttgatgtgaaaaaactatccgaa
aaaatcatgcattttcccacctgggttgatttgaaaggagaagattctgtccctgaaact
gtgcaccatgtagttgttcctgtaaatccaaaagctgataaactctgggaaaggctcggc
aagaatcatatcagaactgatgaagtacatgcaaaagacaatacaagacctggcgctaac
actccagaaatgtggtctgaagctattaaaattcttaaaggagaatacactgttcgggca
atcaaagagcacaagatggaccaagccattattttctgcaggactaaaatagactgtgat
aatatggagcagtacttcatccaacagggcggcggccctgataggaaggggcatcaattc
tcatgtgtctgcctgcatggtgatagaaaacctcaagaaagaaagcaaaatctggaaaga
tttaagagaggagatgtccgtttcttgatctgcacagatgttgctgctagaggaattgat
attcatggcgttccatatgttatcaacgtgacactccctgatgaaaaacagaactatgtt
catcgaatcgggagagtcggcagagctgagaggatgggtttggcaatctcccttgtggca
aaggagaaagaaaaggtttggtatcatgtatgcagtagtcgtggaaaaggatgttataac
accagactgaaggaagaaggaggttgtaccatatggtacaatgagatgcagttgctgggg
gagattgaagaacacttgaactgcactattgcccaagttgaaccagatataaaagtaccg
gtggatgattttgatgggaaggttacatatgggcagaaaagagctctgggtggtggactc
tataaaggccatgtggatattctggcacctacagtacaagagttggctgcccttgaaaag
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacattc
tga
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