Cyanistes caeruleus (blue tit): 111926891
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Entry
111926891 CDS
T05602
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111926891 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111926891 (TAF5L)
03036 Chromosome and associated proteins [BR:
ccae03036
]
111926891 (TAF5L)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111926891 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
111926891 (TAF5L)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111926891 (TAF5L)
STAGA complex
111926891 (TAF5L)
TFTC complex
111926891 (TAF5L)
SAGA complex
111926891 (TAF5L)
SLIK complex
111926891 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
TFIID_NTD2
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
WD_LRWD1
Ge1_WD40
eIF2A
Nbas_N
Motif
Other DBs
NCBI-GeneID:
111926891
NCBI-ProteinID:
XP_023779404
UniProt:
A0A8C0VL56
LinkDB
All DBs
Position
3
AA seq
589 aa
AA seq
DB search
MKRIRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSDVPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDILDEEEEEDDNAGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcatacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccgt
cagtatgtggactcggaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccaatctgagtctggttgtgccaacgtcgtgtctgca
gctccctgcctggcagagccacagcaatatgaagtacagtttggacgattacgcaatttt
ctgacagattcagattctcagcacagccatgaagtgatgcctcttctatatcccctcttc
gtctacctccatctgaacatggtccagaatggcctaaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaatgccagccagaaggatatcattgaacagttg
cagactaccatgactattcaagatatcctgtccaacttgaagctccgggcttttctggat
aacaaatacgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaacgccctgtgcaaagtcctgaccttgcacattcacctggatgtgcag
cctgccaagaggactgactaccagctctatgctggtgggagctcctcacgcaacgagagc
aacggcctggaacccagcgacgtgccagcttccattctgcagaatgaggcagcgctggat
ttactgcaggacagcattaaacgtgtcaaggacgggcccccttccttaaccaccatctgc
ttctatgccttctataacacggagcagttgctgaacactgcagagatttcaccaaatagc
aagctgctcgctgctgggttcgataattcatgcgtgaagctttggagcctgcgctccagg
aagttgaagtctgagccccaccttgttgatgtgtcccgcatccgtttggcttgtgacatc
ctggatgaggaggaggaagaggatgacaatgcaggcacagaaatgaagatcctgcgagga
cactgtggacctgtgtatagcacaaggttcctttcagacagttcaggactcttatcttgt
tctgaggacatgtccatcagatactgggacctcggaagttttacaaacactgtgttgtac
caaggacatgcctatcctgtctgggacttggatatcagcccctgcagcctgtactttgcc
agcggttcccacgatcgcactgcaaggctctggtcgtttgatcggacgtacccgctgcga
atatacgcgggccatttggcggacgtggactgcatcaagttccaccccaattccaactac
ttagcgacgggctccacggacaaaaccgtgcgcctgtggagcactcagcagggcaactcg
gtacggcttttcaccgggcaccggggccccgtgctggcgctcgccttttcccccaacggc
aagtacctggcatcggcaggtgaagaccagcggctgaagctgtgggacttggcatcagga
actctttacaaagaactgagggggcacacagacaacataaccagccttacttttagcccc
gacagtagtttaattgcttcggcgtcgatggacaactcggttcgggtctgggacatccgg
aacacttactgcaatgcccctgcggatgggtcttccagtgaactggttggtgtatatacc
ggacagatgaataacgtactgagcgtacagttcatggcctgtaatcttcttctagtgact
ggaattgcacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
