Cyanistes caeruleus (blue tit): 111927461
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Entry
111927461 CDS
T05602
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111927461 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccae04121
]
111927461 (TRIM54)
Ubiquitin system [BR:
ccae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111927461 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
TRIM_CC
CYP38_PsbQ-like
RHH_9
DUF5799
Motif
Other DBs
NCBI-GeneID:
111927461
NCBI-ProteinID:
XP_023780110
LinkDB
All DBs
Position
3
AA seq
291 aa
AA seq
DB search
MGPTQDQGILLGLGVSPAPEQPPCRPLHAKAEQHLMCEEHEDERINIYCLRCEAPTCSLC
KVFGAHKDCEVAPLPAVYQRQKSELSDGIAMLVAGNDRIQAIITQMEEICHTIEENGRRQ
KQHVGLRFDALYGILEERKKELLQSIAAEQEAKLQRVRGLIRQYGDHLEASSKLVESAIQ
AMEEPQMAVYLQHSKELLKKITDMSKASMSSRPEPGYENMDHFSINVDYVAEMLRTIEFQ
TEPLGEDEGDGPGDGSEATTDEDRLDSLEVPEAAEDVGPRQKPASSPHGQH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggggcccacacaggaccagggaatactcctggggctgggggtgtctccagcaccagag
caacccccttgtagaccccttcatgccaaggccgagcagcacctcatgtgtgaggagcac
gaggatgagaggatcaacatctactgcctgcgctgcgaggcgcccacctgctccctgtgc
aaggtgtttggggcgcacaaggactgcgaggtggctccgctgccggccgtctaccagcgc
cagaagagtgagctcagcgacggcatcgccatgctggtggcggggaacgaccggatccag
gccatcatcacacagatggaggagatctgccacaccatcgaggagaacggccggcggcag
aagcagcacgtggggctgcggtttgatgcgctgtacgggatcctggaggagcggaagaag
gagctgctgcagagcatcgcagccgagcaggaggccaagctgcagcgtgtccgtgggctc
atccgccagtacggagaccacctggaggcctcctccaaactggtggagtcagccatccag
gccatggaggagccccagatggccgtgtacctgcagcactccaaggaactcctgaaaaag
atcacagacatgtccaaggcatcaatgagcagccgccctgagcctggctacgagaatatg
gaccacttctccatcaacgtggactacgtggctgagatgctgaggaccatcgagttccag
acagagccactgggcgaggatgagggtgatggacctggggacggcagtgaggccacaacg
gatgaggaccggctggacagcctggaggtgcctgaagctgctgaagatgtggggccgagg
cagaaaccagcgagttctccccacggtcagcactga
DBGET
integrated database retrieval system
