Cyanistes caeruleus (blue tit): 111927773
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Entry
111927773 CDS
T05602
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccae00536
]
111927773 (COL25A1)
Glycosaminoglycan binding proteins [BR:
ccae00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111927773 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
111927773
NCBI-ProteinID:
XP_023780489
LinkDB
All DBs
Position
4
AA seq
460 aa
AA seq
DB search
MVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGLT
GEPGKPGEQGLTGPQGPPGQKGSVGVPGVPGRDGQVGEPGLPGIAGEKGEAGLKGDPGER
GEKGDAGENGMKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPG
FIGPQGEPGLPGLPGTKGDRGEAGPVGKGERGEPGIPGPKGKTGEPGSRGPKGSKGDTGE
RGDTGSAGPQGPPGQKGDQGATEIIDYNGNIHEALQRIATLTVTGPPGPPGPQGLQGSKG
EPGSPGIPGADGEQGPKGSKGDTGDPGMPGEKGGIGLPGLPGANGMKGEKGDIGLPGAQG
PSMVGPPGPPGPHGPPGPMGPHGLPGPKGIDGPVGPHGPAGPKGERGEKGAVGDPGPRGP
YGLPGKDGEPGLDGFPGPRGEKGDIGEKGEKVTTVLLTVA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcagctcattaaacgc
cgcctcattaagggggaccaaggacaagctggaccccctgggcccccagggccaccagga
cccagaggtcccccaggagatactggcaaggatggtcctcgtgggatgcctggcttaacg
ggtgagccaggaaaaccaggagaacaaggattaacaggacctcaggggcctccaggacaa
aagggttctgttggagtgcctggtgttccagggagagatggacaagtgggtgaacctggt
ttgcctggcatagcaggagagaagggagaagcggggctcaagggtgaccctggagaaaga
ggagaaaagggggatgctggtgagaatggaatgaagggtgacacaggagaaaagggtgac
cctggctcctctgcggctggaattaagggtgaacctggtgaatccggacggcctgggcaa
aagggtgaaccaggccttcctgggcttcctggactccctggaataaagggtgaaccaggt
ttcattggtccacaaggagaacctgggttgccagggctaccaggaacaaagggtgaccga
ggagaggcaggccctgttgggaagggtgagcgaggtgaacctggaatccctggaccaaag
gggaaaacaggtgaacctggatctagaggccccaaagggtcaaagggggataccggtgag
agaggtgacacaggatctgcaggtccacaggggccacctggacagaagggcgatcaaggt
gcaacagagataattgattataatggcaatatccatgaagctctgcagaggattgccacc
ctgactgtcacgggaccaccaggaccgccaggaccccaagggctgcaagggtcaaagggt
gaaccaggatccccaggaattccaggagctgatggagaacagggtcctaagggctcaaaa
ggagacacaggtgatcctggaatgcctggagaaaaagggggaattggactgcctggctta
ccaggagccaatggcatgaaaggcgaaaaaggagacattggtttgcctggtgcccaaggt
ccttcaatggtaggaccacctggaccaccagggccacatggtcctccaggccctatggga
cctcatggactgcctggcccaaagggtatagatggcccggttggtccccatggccctgca
ggtcccaaaggagagagaggtgagaagggagctgtaggtgaccctggacccagaggaccg
tacggcttgcctggcaaagacggcgagcctggccttgatggtttccctggtcctcgagga
gaaaagggtgatataggagaaaagggagaaaaggtgaccacagtgttattaactgttgct
tga
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