Cyanistes caeruleus (blue tit): 111927980
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Entry
111927980 CDS
T05602
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111927980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111927980
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
111927980
Prokaryotic type
Archaeal type
TFE
111927980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Zn_ribbon_PaaD
DUF7501
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
111927980
NCBI-ProteinID:
XP_023780868
LinkDB
All DBs
Position
4
AA seq
423 aa
AA seq
DB search
MEEQTIPREVPAALKRLAKYIVRGFYGVECFLALDVLIRYPCVKEDDLLQLLKYERKQLR
TVLNTLKADKLVKLKMRVETGPNGKSTRHNYYYINYKVLVDVVKYKLDHVRRKIEADEQD
STTRPSFKCPSCSSTYTDLEVNQLFDAFTETFRCTYCNTEVEEDGAAFPKHDARTLLAKF
NEQIEPVFMLLRETDDIVLPYDLLEPQPTEILQLSESFDPKLGSSMLEESCSCPEKWAHR
SSAFGLTYTQNITIDVQHSKPKKRRREKATEKQPIWLSQSTVEGAATATNSAGVNASEET
EENVKETVTDNEIIKTLLIHESKSSSCTDQAPIVKRKLHGSQSGNSEFEEDVKHSRHAGM
KVPGSNFELEEEQETLGPIVRVAGQPCSYGEVSENPELVSLMTSEERDAYIKVGQEMFQS
VFE
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaaaccattcccagagaggtgccagcagctctaaagcgcctggccaaatac
atagtgcgtggtttctatggtgtggagtgtttcctggctctggatgtgctgatccgctac
ccctgtgtgaaagaggatgacttgttacagctgctcaagtacgagcgcaagcagctgcgc
accgtcctcaacacgctcaaggcggacaagctggtgaagctgaagatgcgagtggaaacg
gggcccaacgggaagagcacgaggcacaattactactacatcaattacaaggtgctggtg
gatgtggtaaaatacaaactggatcatgtacgccggaaaatagaagcagatgagcaggat
tcaactaccagaccctcttttaaatgtccatcctgctctagcacgtacacggaccttgaa
gtcaatcagctctttgatgcatttacagagactttccgctgcacttactgcaacactgaa
gtagaggaagatggcgcagcatttccaaagcatgatgctcgaaccttgctggcaaagttc
aacgagcagatcgagcctgtctttatgctgctgcgcgagacggatgatattgtgctgccc
tatgacttgctggagcctcagccaacagaaatactccaattatcagaaagctttgatccg
aagctgggctcaagtatgcttgaggaatcctgcagctgccctgaaaaatgggcacacaga
agttctgcttttggccttacatacacccaaaacataactattgatgtccaacactcaaag
cccaagaagagaagaagagaaaaagcaactgaaaaacaacctatctggttgtcacagagc
actgtggaaggagcagcaacagccaccaatagtgctggagtaaatgcttctgaagaaact
gaagaaaatgtcaaagaaactgtcactgataatgaaatcatcaagactcttctgatccat
gaatccaagtcatcatcctgcacagaccaggctccaattgtcaaaagaaaacttcatgga
tcacagagtggtaacagtgagtttgaagaggatgtcaagcactcaagacatgcaggaatg
aaagtaccaggcagcaactttgaactagaggaggaacaggaaactctgggtcctattgta
agggtagctggccagccctgttcatatggcgaagttagtgaaaacccagagcttgtgtct
ctcatgacaagtgaagagagagatgcttatataaaagtaggacaagaaatgttccagtct
gtgtttgagtaa
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