Cyanistes caeruleus (blue tit): 111928143
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Entry
111928143 CDS
T05602
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111928143 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccae03041
]
111928143 (DHX15)
03009 Ribosome biogenesis [BR:
ccae03009
]
111928143 (DHX15)
Enzymes [BR:
ccae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111928143 (DHX15)
Spliceosome [BR:
ccae03041
]
Complex A
U2 snRNP components
U2 related factors
111928143 (DHX15)
Complex B
111928143 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111928143 (DHX15)
Ribosome biogenesis [BR:
ccae03009
]
Eukaryotic type
90S particles
Helicases
111928143 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Motif
Other DBs
NCBI-GeneID:
111928143
NCBI-ProteinID:
XP_023781189
LinkDB
All DBs
Position
4
AA seq
686 aa
AA seq
DB search
MIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQ
IPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSA
KTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVI
VMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEE
GDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQ
NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR
AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD
PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS
ITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFI
NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGH
YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMS
NFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgattccacacagtattaaccctttcacaaatctaccacataccccacgatattatgat
atcctgaaaaaaaggctacaacttcctgtctgggaatataaagaaagatttacagatatt
ttgatcaggcatcagtcatttgtgctggttggagagactgggtctggtaaaacaacacag
atccctcaatggtgtgttgactacatgcgctcgttacctggcccaaagaggggagtcgca
tgtacccagccccggcgagtggctgcaatgagcgtggcacagcgtgttgctgatgagatg
gatgtcatgctgggccaggaggttggttactccattcggtttgaagactgcagtagcgca
aaaaccattttgaagtatatgactgatggtatgttacttcgtgaagcaatgaatgatcct
ttgctggagcgctatggtgttataattcttgatgaggcccatgaaagaacactggctacg
gatatcttgatgggagttttgaaggaagttgtaagacaaagatctgatttgaaggttata
gttatgagtgctacgttagatgctggcaagtttcagatctattttgataactgtcctctt
ctaactatcccgggtcgcacccatcctgtggagatattctatactccagaacctgaaagg
gactaccttgaggctgccattcgaacagtaatacaaattcacatgtgtgaagaagaagaa
ggagatctcttactctttcttactggacaagaggagattgatgaagcctgcaagaggata
aaacgtgaaattgatgacttaggtcctgaagttggtgacataaaaatcattccattatat
tccacccttcctccacagcaacagcagaggatatttgaacctcccccaccaaaaaagcaa
aatggagcaataggaagaaaggttgtcgtgtccactaacattgctgagacatcattgaca
atagatggtgtagtgtttgtgattgatcctggctttgcaaaacagaaggtgtacaatcct
cgtatcagggtggagtctctattggtgactgcgatcagtaaagcatctgcccagcagcga
gctggccgtgctggtcgtactcgaccaggcaagtgcttcaggctttatacagagaaagcc
tacaaaactgaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatct
gtagtattacagctcaagaagcttggtatagatgatttggtgcactttgattttatggat
cctccagctcccgaaactctgatgagagctttagagcttttgaattatctggctgcttta
aatgatgatggagacttgactgaattgggatccatgatggctgaatttccattggatcca
cagctggctaaaatggttattgcaagctgtgactacaactgttctaatgaggtcctatct
attactgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagca
gcagatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaat
gtctaccatgctttcaagcaaaatcatgagtcggttcagtggtgttatgacaacttcatt
aactacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggat
agatttaatttgcctcgtagaagcacagattttaccagccgagactattacatcaacata
agaaaggcattagttactgggtatttcatgcaggtggcacatttggagcgaacagggcat
tacttaacagtgaaagataaccaggtggtgcagttgcatccctccactgttcttgatcac
aaaccagaatgggtgctgtataacgaatttgtccttacaacaaagaattacatccggaca
tgtacagacatcaagcctgaatggctggtgaaaattgcccctcaatattatgacatgagc
aattttccacagtgcgaagcaaagagacagttggatcgcatcattgccaaacttcagtcc
aaggaatactcacagtactga
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