Cyanistes caeruleus (blue tit): 111928298
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Entry
111928298 CDS
T05602
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111928298 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111928298 (POLR1A)
Enzymes [BR:
ccae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111928298 (POLR1A)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111928298 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
HMG_box
DUF7708
BUD22
Motif
Other DBs
NCBI-GeneID:
111928298
NCBI-ProteinID:
XP_023781456
UniProt:
A0A8C0VQH2
LinkDB
All DBs
Position
4
AA seq
1690 aa
AA seq
DB search
MYTADEIRKLSVKPITNPQYLDNVGNPAVGGLYDLALGPPDSREVCATCMQNFSNCPGHF
GHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCPRAVVHLLLSQLKVLEKGLLHAVHDL
EIILNRFIEQCADATGSEIEEELNRHVQEMLQSSQIRDRCSNVKNVCECRNKLISQFWKS
HMGSKKCPNCKSRRSLVRKEHNSKLTVTYPSTMCHKSGEEGILDETAGIDESQLGKRGYL
TPMTAKEYILALWKNEGFFLRYLFPGMDPHESSGFSPDLFFLDLLVVPPSRYRPVNRVGD
RLFTNGQTVNLQAVIKDAQLIRKLLVFMAKEQCQPIKITEEIQTAIGGDSEPLDHSVLTT
IPGQSIADKLYNTWIRLQSHVNIVFDSDMDKLITEKYPGIRQLLEKKEGLFRKHMMGKRV
DFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVINGPKVHPGASMV
INEDGSRTVLSATSLTQREAIAKQLLTPSSGAPQTGLKIVCRHIKNGDVLLLNRQPTLHR
PSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLAFTDEQY
LVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRGLTDKKGRIKTFPPAIMKP
QRLWTGKQVVSTLLINIIPDNCAPLNLTGKAKIGGRAWVKGPARGCLNLDSMCESQVVIR
DGELLCGVLDKAHFGSSAYGLVHCCYEIYGGEVSGKVLTCLGRLFTAYLQLYRGFTMGIE
DILVKPEADRKRKKIIERSRQSGIEAVRAALNLPEAASCEEVQGKWQDAHLCKDQRDFNM
VDMKFKEEVNSYNNEVNKVCMPLGLHRSFPENNLQLMVQSGAKGSTVNTMQISCLLGQIE
LEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIRPSEFFFHCMAGREGLVDTAV
KTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPEQFPFI
AENYEVIQKTNHLDEALARMECHQANQQFKAIKKWRARHQNSVQRKGGFLLFSQKKLASL
KAQLPGGEIKNGRDPATLQLLKMWYELDEKKRRKYLKKTNKCPDPSLGVWRPDTYFASVS
ETFENGVEGYINKWQSESSWSYMHPALSSDRLKNLLYLKWQRSLCDPGEAVGLLAAQSIG
EPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSVPVLNTKKALKKMKH
LKKQLTRVCLAEVLQRVDIEESLHVKDKLNKHRLYKIKFQFLPHEYYREEKCVKPRQILH
FIETRFFKVLLEAIKKKTTKMASFNEVSTRKTTRKDLDDEQDKTQNNLEAVAEEEENIVD
AEVDEGDGDATEKKRRKNQEEEVDYESEEENEEENVNENAEDEEAESGKEEEADGAEEDQ
SRAEGEDSQHLSFVSQTKKGKDRLLQSAEVRVNAVVESHPSIQDYTFDTENELWCEVSLA
LPLTKVYFDLSSLLASLARSTVIHEVKGITRCLLNESTSKEGEKEFVLQTEGINLTELFK
YSDILDLNRLYCNDIHSMAKNYGIESALRVIIKEIKDVFAVYGIVVDPRHLSLVADYMCF
EGIYKPLNRIGIQSNSSPLQQMTFETSYKFLKEATMMGAHDELRSPSACLVVGKVVKGGT
GLFDLKQPLT
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgtacacggccgacgagatcaggaaactgagtgtgaagcccataacaaacccccagtac
ctggataatgtggggaatccggctgtaggtgggctctacgacttggccctgggacctccg
gactccagagaagtgtgtgcgacttgcatgcagaacttcagcaactgccccggacacttt
ggccatatagaactgcctctgactgtctacaaccccctgttctttgataaattatacctt
ctcatccgaggatcttgtttgaattgccacatgctgacatgtcctcgagccgtggttcac
ttactgctaagtcagctgaaggtgctggagaaagggttgcttcatgctgtccatgacctt
gaaatcattctgaacaggtttatagagcaatgtgcagatgcaacaggctcagaaattgag
gaagagttgaatcgccacgttcaggaaatgttacaaagctctcaaataagagatcggtgt
tcaaatgtcaaaaatgtgtgtgagtgtagaaataaactgatatcacagttctggaaatca
catatgggttcaaagaaatgcccaaactgcaaatccaggagatcactggtgcggaaggag
cacaacagcaagctgacagtgacctatccttctacaatgtgccataagtcaggagaggaa
ggcattctggatgaaacagcaggtattgatgaaagccagttagggaagagaggctaccta
acaccaatgactgccaaagagtacatcctggctctgtggaagaatgaaggtttctttctg
cgttatctcttccctgggatggatccccatgagagttcaggattcagtccagacttgttt
tttttagatcttcttgtggttccaccttcaaggtatcgtcctgtaaatcgcgttggagat
cgcctgttcacaaatgggcagactgtgaacttgcaggctgtgataaaagatgctcaactg
atacggaagctcttggttttcatggccaaagaacagtgtcagccaataaaaattacagaa
gaaattcaaacagcgataggaggggatagtgaacctctggaccattctgtactgacaacg
attccaggacagagcattgcagataagctgtacaatacttggatccgtctccagagccat
gtcaacattgtgtttgatagtgacatggacaagctgataacagaaaaataccctggtatt
cgtcagctgttggagaagaaggaagggctgttccgcaagcacatgatggggaagcgtgtg
gattttgctgctcgatctgtcatttgccctgacatgtacattgggaccaacgagattggc
atccccatggtatttgccaccaaactgacttatcctcagccagtcactccctggaatgtc
aaagagctgaggcaggctgtcatcaatggccccaaggtgcaccctggggcctccatggtc
attaatgaggacgggtctcgcacggtgctgagcgccaccagcctgacccagcgcgaggcc
atcgctaagcagctcctcaccccctcctcaggggcaccccagacagggctgaagattgtg
tgtcgacacattaagaatggggatgtgctgttgctgaaccgccagcccacgcttcacaga
ccttccatccaagctcacagggcccgaatcctgcctggggagaaggtgctgaggcttcac
tacgccaactgcaaggcttacaacgctgacttcgatggggatgaaatgaacgcccatttc
ccacagagcgagctgggcagagcagaagcctacaccttagccttcactgatgagcagtac
ctggtgccaaaggatgggaagccacttcctggcctgatccaggatcacatgatttctgga
gtcagcatgacaatccggggctgctttttcaccagagagcagtacatggagctcgtgtac
cgagggctgacagacaaaaaaggaagaattaaaacatttcctcctgccattatgaagcca
cagcgattatggacaggaaagcaggttgtttccactttgttaataaacatcattccagac
aattgtgctccactgaatttgactgggaaagcaaaaattggtgggagagcctgggtaaag
ggacctgcaagaggatgtctgaatcttgattcaatgtgtgaatctcaggttgttatcaga
gatggggaattactgtgtggagtcttggacaaagctcactttggcagctctgcctatggg
cttgtccactgctgttatgagatctatgggggtgaagtcagtgggaaagtgctgacgtgt
ctggggcgcctcttcactgcttacctgcagctgtacaggggatttaccatggggattgaa
gatattttggttaaacctgaagcagaccgcaaaagaaaaaaaatcattgaaaggtcaaga
cagagtggtattgaagctgttagagctgctcttaatttgccagaagcagcatcgtgtgag
gaggtccaagggaagtggcaggatgcccatctctgcaaagaccagagggatttcaacatg
gttgatatgaaattcaaggaggaagtaaacagttacaacaatgaagtcaacaaggtttgc
atgccccttggtctccacaggagctttccagagaacaatttgcagttgatggtacagtca
ggagccaaaggatccactgtcaacacaatgcagatttcttgtttgctgggccagattgag
ctggaaggccgaagacccccactgatggcatctggcaaatccctgccatgtttccagcct
tatgatttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcaga
ccttctgaattcttctttcactgcatggctggcagggaaggtcttgtggatacagctgtc
aaaaccagccgttctgggtacctgcaaagatgtatcataaaacatttggaaggactggta
gttcagtatgacctgactgtgcgagacagtgatggcagcgtggtgcagtttctgtatggt
gaagatgggcttgacatccctaaaactcagttcttacaacctgagcagtttcctttcatt
gcagaaaactacgaggtaatccagaagacaaaccatctggatgaagctttagcaaggatg
gagtgtcaccaagctaaccagcagttcaaagccatcaaaaagtggagagccagacaccaa
aactctgtgcaaagaaaaggaggctttctgttgttttcccaaaagaaattggcaagtttg
aaagcacagcttccaggaggtgaaataaagaatggaagagatcctgctacgttacagttg
ttgaagatgtggtatgagcttgatgaaaagaaacgaaggaagtatctgaagaagacaaat
aagtgtcctgaccccagccttggggtttggcgtccagatacttattttgcatccgtttca
gaaacatttgaaaatggagtcgaaggctatatcaataaatggcaatctgagagcagctgg
agttacatgcacccagcactttcttctgatagattaaagaatctgttgtatttaaagtgg
cagcgttctctttgtgacccaggagaagctgtggggcttcttgctgctcagagtattggg
gaaccttcaacacagatgactctgaacacctttcactttgctggcagaggtgaaatgaat
gtcacattgggtattccaaggttgcgggaaatactgatggtggccagctcaaacattaaa
acaccaatgatgagtgttcctgtgctcaacaccaagaaagctctcaagaagatgaaacac
cttaagaaacagctcacaagagtgtgcttagctgaggtcttgcagagagtggacatcgag
gaatccttgcatgtgaaagacaagctgaacaagcatcgtctctacaaaatcaaattccaa
ttcttgccccatgaatattaccgagaggagaagtgtgtgaagcccaggcagatcttgcac
ttcattgaaacaaggttctttaaagttcttctggaagcaattaaaaagaagactacaaag
atggcatcttttaatgaagtcagcactcggaagacaactcggaaggatttagatgatgag
caagacaagacacagaataatctggaagctgtagcagaggaagaagagaacattgttgat
gcagaagttgatgaaggagatggtgatgctacagaaaaaaagcggaggaagaaccaggag
gaagaggttgattatgagagcgaagaggagaacgaggaagaaaacgttaatgagaatgca
gaagatgaagaggctgaatctggaaaagaagaagaggctgatggtgctgaggaggatcag
agcagagcagagggtgaagattctcagcatctttcctttgtgtctcagactaaaaaaggg
aaagatcgattgcttcagtcagcagaggtgcgagtgaacgctgttgtggagagccaccca
tccatacaggattacacgtttgacactgaaaatgagctttggtgtgaggtttctttggca
ttgccactgaccaaggtgtacttcgacctctcctcgctgctggcgtctctggcgcgcagc
acggtgatccacgaggtgaagggcatcacacgctgcctgctgaatgaaagtaccagcaag
gagggagagaaagaattcgttctccagacagaagggataaacctcacagagctcttcaaa
tactctgatattttggacctgaacagactttattgcaatgatatccattccatggctaaa
aattatggaattgaatcagccctgagggtgattataaaggaaataaaagatgtatttgct
gtatatggaattgtggtagaccctcgacacctttcacttgtggcagattacatgtgtttt
gaaggaatttataaaccactgaatcgcattggaattcagtccaactcctcccctctgcaa
cagatgacatttgaaaccagctacaaattcttgaaggaagcaacgatgatgggtgcccac
gatgagctgcgatccccttcagcctgcctggtggttggaaaagttgtcaaaggagggact
ggcttgtttgacctgaagcagcccctgacatag
DBGET
integrated database retrieval system
