Cyanistes caeruleus (blue tit): 111928446
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Entry
111928446 CDS
T05602
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111928446 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111928446 (FIP1L1)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111928446 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
111928446
NCBI-ProteinID:
XP_023781551
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All DBs
Position
4
AA seq
648 aa
AA seq
DB search
MKSFKPKILRPAGTIPEPRDSASRSSGVFTPWLRSPGSCHQPPVDARHWSTLPKGRTGVQ
GLRRAQGPPRAKGSERKGRRLWQRASGERRKLSRDENEAERPEEEKSGAPPPPGSEEEAA
ENGVVKTKTAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKAGGRAYG
SSGAKVKGLDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCE
KQKRIRMGLEILPVTSTTNKITAEDKAMEVRPSAEILDGRYHLFKVQQGRTGNLEKELAV
QSTKPDFTSPPALFKSGIPANRRISGTIDVIGQTITISRVEGRRRANENSNIQVLSERSN
PEVDSFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPG
GPPPSLIPTIDSGHSSGYDGRSVRAFSYGSDDEVELKTNDLLKVRKASKADKQKGRSPQY
FTFPHPAGSAPSWSSLLDTSKQWDYYARREKDRERERERSRDRDRDRDRDRDRDRTRDRE
RDRDHSPSSSAFNSDEERYRYRDYAERGYDRHRTSREKEDRHRDRRHREKEESRHKSSRS
NSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASGEPAPEQENTEAAPVE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttttaaacctaaaatactacgtccagcggggacaatccctgagccgagggac
agtgctagcagaagcagcggcgtgtttaccccgtggttacgctcccccggcagctgccat
cagccgccagtagatgcacggcactggagtaccctgccgaagggacggacgggcgtccag
ggactcaggagagcacaaggaccaccgagagcaaagggcagcgagaggaagggaaggcgg
ctctggcaacgcgcctcgggagagcggcgaaagctcagccgcgatgaaaatgaagcagag
agaccagaggaagaaaaatctggtgctccacccccacctggaagtgaagaggaagctgca
gaaaatggagttgtgaaaacgaagacggcagaggccgaggatgacagtgatagtgatagt
gatgatgacgaagatgatgttcaagtcaccataggggatattaagacaggagcgccacag
tttagttatggagcagcacctgtgaatctcaatattaaggcaggaggacgagcttatgga
tcttctggtgcaaaagttaaaggactggatctagatgcaccagggagtattaatggtgtg
ccacttctggaagtagatttagattcttttgaagataaaccttggagaaagccaggggct
gatctctccgattattttaactatggcttcaatgaggatacctggaaagcttactgtgaa
aaacaaaagagaatacgaatgggtcttgaaattttgccagttacctcaaccacaaataaa
attacggctgaagacaaagctatggaagtaagaccaagtgcagagattctcgatggcaga
taccatctttttaaggtacagcagggcagaactggaaatttggagaaagagttggcagtg
cagtcgaccaaacctgatttcacatctcctcctgccttattcaaatcaggaattccagca
aacaggcggatatctggcacaatagatgtgattggacagaccatcactatcagcagggtg
gaaggacgacggcgtgctaatgaaaacagcaacatacaggttctttcagaacgctctaat
cctgaagtagacagctttaccaagccacctccatttttccctccaggagccccacccact
caccttccaccacctcctttcctcccaccccctccaactgtcagtactgctccacctctg
attcccccaccaggtataccaataacagtgccaccaccaggttttccaccaccacctggc
ggtcctccaccttccctcatacccacaatagacagtggacattcttctggctatgatggt
cgttctgttcgtgcattttcatatggcagtgatgatgaagtggagctcaaaacaaacgat
ttattgaaagttaggaaagctagcaaggcagataagcagaaagggagaagtcctcagtac
ttcacctttccacaccctgcaggctctgcaccctcatggtctagtcttctggacaccagc
aaacagtgggattactatgcacgaagagagaaggacagggaacgtgagagagagagatcc
cgagatcgggatcgtgaccgggaccgagacagggatcgagaccgtaccagagacagggaa
agggaccgagatcatagtccgtcttcaagtgcgttcaacagtgatgaagaacgctacaga
tacagagactatgcagagaggggctatgaccgccataggacaagtagagagaaagaagac
agacacagagacaggagacacagagagaaagaagagagtcgacacaagtcatctcgaagt
aacagcagacgtcgtcatgacagtgaagaaggggatagccacagaaggcacaaacacaag
aagtccaaaagaagcaaagaaggaaaagaagccagtggtgaacctgctcctgaacaggaa
aacactgaagctgcccctgtggaatag
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