Cyanistes caeruleus (blue tit): 111928674
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Entry
111928674 CDS
T05602
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03013
Nucleocytoplasmic transport
ccae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111928674 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
111928674 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111928674 (THOC2)
03041 Spliceosome [BR:
ccae03041
]
111928674 (THOC2)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111928674 (THOC2)
Spliceosome [BR:
ccae03041
]
Complex C
Other components
EJC/TREX
111928674 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111928674 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
111928674
NCBI-ProteinID:
XP_023781841
LinkDB
All DBs
Position
4
AA seq
1545 aa
AA seq
DB search
MPSILADVFCILDIETSCLEEKNKRDHFTQLVLACLYLVSDTVLKERLDPETLESLGLIK
QSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSL
IGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPS
GETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVLS
SEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWHHAQSIMDQMPPFYSTSHKPI
AIALCQLVHVTIEPLYRRVGVPKGAKGSPVSSLPNKRAPKQAESFEELRKEVFNMLCYLG
PHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMETLFSCLLSITDQVLLPSLSLMD
CNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKE
NVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEA
LANPEKERMKHDDTTISSWLQSLASFCGAIFRKYPIELAGLLQYVANQLKAGKSFDLLIL
KEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLA
LPLCLLMAQQRNGVVFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPS
IDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMAP
VHEAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQEM
PPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQ
LCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRY
GRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHK
WHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKR
PDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVPATVQNGPGGAGMPTSLAINTV
RLEEGTTEETDKLKEKSQGVVKVINKTVNATPKVTTSNGNSASNSKIIKEKDDKEKSGKE
KDKEKKDKTPAATPEMKALGKDGKDKPKEERANKDEKAREIKEKTPKSDKEKEKVKKEEK
ASKEEKSKMVVTIIESKSTAEKEREKEPSRERDLAKEMKSKENAKGGEKVPVAGSLKSPV
PRSETSESEREQKRRKVDTHSSPSHSSTVKGMAVLPKVPLVSENYSSSRIISVHFLQDNL
NELKDSSAKHYINHTTPTLSKSKEREVEKKDLDKSRERSREREKKDEKDRKDRKRDHSNS
DREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKEKNKSKSSGKDKGDSIKAE
KMEKSSSGSKKESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDKHR
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgccttctatcctagctgatgtattctgcatattagatattgaaacaagttgtttagaa
gaaaaaaataagagggatcattttacacaactggtattggcctgtttgtatcttgtatct
gacactgtcctaaaggagcgtttagatccagagacgctggagtcattgggactcatcaag
cagtctcaacagttcaatcaaaaatctgttaaaataaagacaaaactattttataagcaa
cagaagtttaatttgctaagagaggagaatgaaggttatgcaaagctcattgcagagcta
ggtcaagacttatccggaaatatcactagtgatttaatccttgaaaatatcaaatcttta
ataggatgtttcaatcttgatcctaacagagttttggatatcatcctagaagtctatgag
tgcaggcctgagtatgatgatttctttgtaccactgatagagtcttacatgtacatgtgt
gaacctcaaactctatgccatatccttgggttcaaattcaagttttatcaggatccaagt
ggtgagaccccttcctccttatacagagttgctgctgtccttttgcaacataatctcata
gatttggaagatctttatgttcatcttctaccaggggataatgccatcattgaggaacac
aagcgagagatagtggaagctaaacaaattgtcagaaaacttacaatggttgtcttatcg
tctgaaaagactgaggaaaaggagaaagaaaaggaaaaagaggaggagaaaactgaaaag
cctcctgataatcaaaaacttggcttattggaagccttattaaaaattggtgattggcac
catgcacaaagtattatggatcagatgcctccattttactctacttcacacaagccaatt
gcaattgcactttgccagcttgtccatgtgacaattgagcctctgtaccgcagagttggt
gtacctaaaggagctaaagggtcacctgtttcctctttgccaaacaagagagcaccaaaa
caagcagagagctttgaggaattgagaaaggaagtgttcaacatgctttgttaccttggt
cctcatctgtcccacgatcccattttatttgcaaaagtagtgcgccttggaaaagcattt
atgaaagagtttcagtctgatggaagcaaacaggaagataaagagaaaatggagacactg
ttcagctgtttgctgagtattactgatcaagtcttgcttccatctctttccttgatggac
tgcaatgcatgcatgtctgaggaattatggggaatgttcaaaacctttccataccagtat
cggtaccgtctctatgggcaatggaagaatgaaacatataatagtcacccacttcttgtg
aaagttaaagctcaaaccatagaccgagccaaatacattatgaagcgcttaactaaggaa
aatgtgaaaccctctggaagacaaattgggaagctcagccacagcaatcctacaatttta
tttgactatattttatcgcaaatacaaaaatatgataacttgataactccggttgttgat
tcgctgaaatacctcacttccctgaactatgatgtcttggcatattgtatcattgaagca
ttggcaaaccctgagaaggagagaatgaagcatgatgacactacaatctcaagctggctg
cagagtctggcaagcttttgtggtgccattttccgaaaatacccaattgaacttgcaggc
ctcctgcagtatgtggccaaccagctgaaagctggcaaaagctttgatttgcttatttta
aaagaggtagtgcagaaaatggcagggatagaaattactgaagaaatgacgatggaacaa
ttggaagccatgactggtggagaacaactgaaagctgagggtggatactttggtcaaatc
aggaatacaaagaagtcatcgcagagattaaaagatgctttattggaccatgatcttgcc
ctcccactgtgcctgcttatggctcaacagagaaatggtgttgtctttcaagaaggaggg
gaaaaacatctgaagctggtgggaaaactgtatgatcagtgccatgacaccttggtacaa
tttggtgggtttttagcatccaatctaagcacagaggattacattaagcgagtgccttct
attgatgttctctgtaatgagtttcacacacctcacgatgctgcatttttcctctcaaga
cccatgtatgcacaccacatttcatcaaaatatgatgaactaaagaaagctgagaaggga
aataaacagcagcacaaagttcacaaatacattacatcatgtgagctggtgatggctcct
gttcacgaagctgtgatttctctgcacctccctaaagtatgggatgacatcagccctcag
ttttatgctacattctggtctttaacaatgtatgaccttgccgtgccgcacagcagctat
gacagagaagtcaataaacttaaagtccagatgaaagccatagatgacaatcaggaaatg
cctccaaataaaaagaaaaaagaaaaagaacgttgcacagctttgcaggacaagctcctt
gaagaggagaagaagcagttggagcatgtgcagcgagttctgcagagactgaaactagag
aaagataactggcttctggcaaaatctaccaaaaacgagactatcaccaaatttttacag
ttgtgtatatttcctcgatgcattttttcggcaattgatgcagtttactgtgctcacttt
gttgaactggtgcatcagcagaaaacacccaatttctccacacttctctgctatgaccga
gttttctctgatattatatatacagttgcaagttgcacggaaaatgaagccagtagatac
ggcaggtttttatgctgtatgctggagaccgtgaccagatggcacagtgacagagtcata
tatgaaaaggaatgtggcaactatccaggcttcctaactatattacgagcaactggattt
gatggtggaaataaggctgatcaattggattatgagaattttagacacgtggtacacaag
tggcactataaattaactaaggcttctgtgcactgtctggaaacaggtgaatatacacat
atcagaaacatcctgattgtgctgaccaaaatccttccatggtatccaaaagtcctgaat
ctgggtcaagctttggaaagaagagtacacaagatatgtcaggaagagaaagagaagaga
cctgatctatatgcattggctatgggctattctggacaattgaaaagtaggaagcctttc
atgatacctgaaaatgagtttcaccacaaagacccacctgccaggaatgctgtacctgca
acagtacaaaatgggccaggtggtgctgggatgcctacgtctctcgcaataaatacagtt
agactggaagagggcactactgaggagactgataaactaaaggagaagtctcagggtgtg
gtgaaagttattaataaaactgtcaacgctacaccgaaggtgacaacaagcaacggaaac
agtgcatctaatagcaaaattattaaagagaaagatgataaagaaaaaagtgggaaggaa
aaagataaagaaaaaaaagacaagactccagctgccactccggagatgaaggcacttggg
aaagatgggaaagataaaccgaaggaagaacgggcaaacaaagatgagaaagcaagagag
atcaaggagaaaacgccaaaatctgacaaagaaaaggaaaaagtgaagaaagaagaaaaa
gcttcaaaagaagaaaagtccaagatggttgttaccatcattgagtcaaagtcaactgca
gaaaaggagagagaaaaggagccatccagagaaagagatctagcaaaggaaatgaaatcc
aaggaaaatgctaaaggaggagaaaaggtgccagtagctgggtccttgaagtcacctgtt
cccagatcagaaacatcagaatctgaaagggaacaaaaacgacgcaaagttgatacacat
tcttctccatcacattcctcaacagtaaagggcatggccgtgcttcccaaagtccctctg
gtttctgaaaactattccagctcacgtatcatctccgttcattttctacaggacaacctc
aacgaactcaaggactcttcagcaaagcactacataaaccacactactccaacactgtcc
aagagtaaggagagagaagtggagaagaaagatttggacaagtcaagggaaagatccaga
gagagagagaagaaagatgaaaaggacaggaaagatcgaaaaagggatcattcaaacagt
gaccgagaggtaccgcaggattcaactaaaagacgcaaagaggaaaatggcacaactggt
tcttcaaaacacagcaagagtgaaagtccttctgattcccctcgattaaatgaaaaagag
aaggagaaaaacaaatcaaaatcttcgggaaaagacaaaggtgactcaatcaaggcagaa
aagatggagaagagctcctctggcagcaaaaaggaatcaagacatgataaagaaaaaaca
gagaagaaagaaaaacgagacagtactggggggaaagaagaaaagaaacatcataaatct
tcagacaagcatagataa
DBGET
integrated database retrieval system
