Cyanistes caeruleus (blue tit): 111928695
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Entry
111928695 CDS
T05602
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04510
Focal adhesion
ccae04512
ECM-receptor interaction
ccae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111928695 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111928695 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111928695 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccae04147
]
111928695 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
ccae00536
]
111928695 (COL4A5)
Exosome [BR:
ccae04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111928695 (COL4A5)
Glycosaminoglycan binding proteins [BR:
ccae00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111928695 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111928695
NCBI-ProteinID:
XP_023781877
LinkDB
All DBs
Position
4
AA seq
1578 aa
AA seq
DB search
MGQSISFDLNLFRRKLHPQNYTAKLLRGQHNTGTGKFGLGEAGEIITSLLPGQKGDPGFP
GLPGIPGPPGSMGIPGPIGPPGPPGLTGSPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQG
PPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPPGPPGLPGGVKGEKGEQGEPGK
RGKPGKDGEPGQPGRDGLPGGPGINGAPGRDGEKGEKGDMGPPGPPGIVVPRPGIGATVG
PKGSKGLPGLPGAKGERGFSGRPGPPGFPGSPGITTVGPPGPPGLPGERGQKGDPGLPGV
SIPGQPGVEGPQGPPGPPGPPGPPAPSIAPGKELCEQGPPGPPGIPGQQGFTGERGQKGD
RGDTCFNCIGTGVTGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPGIPG
APGRPGPKGDPGDVLTSPRMKGDKGDPGLPGPPGLPGIDGTPGRDGLPGLPGPKGEPGSI
AFKGEMGIPGKPGIPGLPGEKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKGDPG
QTITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLPGIPGAKGEPGIPGIGLPGPPGPKG
FPGTPGPPGAPGTPGHPGLDGPPGPPGLPGQKGDRGFGVPGPPGPPGPPGIKGVQGPKGD
PGFPGNPGLPGRAGFDGIPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGSPGPPGPVGPP
GPPGSQGIPGEKGDPGPPGFDIPGPPGDQGAPGYPGPPGIPGPKGSPGPPGRDGLPGFPG
AKGEMGVMGAPGLPGPPGTPGRNGLPGLKGNSGLPGPPGPPGPMGQKGIKGEAGLPGPPG
TIDPKQLGAKGEKGEPGVPGIPGLSGQKGYQGLPGDPGPPGLHGPPGVPGLPGPKGDMGL
PGQPGPTGPPGLKGAMGEMGLPGAPGLKGSQGVAGRPGQPGPVGFPGLKGEKGDPGLSSI
GIHGPPGPKGDRGLPGYPGSPGSKGIAGSPGLPGFSGSPGAKGEPGLPGFPGTPGIPGPK
GIEGPPGTPGLPGPPGPVGDIGRPGPPGPSGEKGQPGRDGIPGPAGQKGEPGLPGFGHPG
PPGLPGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGIPGPPLEGPKGS
PGPPGVPGRPGPSGPPGPPGPEGPRGPPGSGGLKGEKGNPGPPGPAGLTGPKGDQGPPGR
QGDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPAGPAGLTGSQGLPGPPGPPGLPGTIGR
SIVVKGDPGSPGPPGQPGSKGPPGLPGPQGLPGPIGLPGDPGRDGLPGFDGPAGRKGERG
LPGQPGSRGIQGPPGPDGLQGPPGPPGTPSVAHGFLITRHSQTSDTPLCPQGTSRVYDGF
SLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPESMPM
SMEPLTGQSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPSGWDSLWIGYSFMMHTSAGA
EGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLK
AGDLRTRISRCQVCMKKT
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaagcatcagttttgatttaaatctgtttaggaggaaacttcacccacagaat
tacactgctaaactcctgagaggacagcataacactggtactggaaaatttggactaggt
gaagcaggtgaaataattacatccttgctgccaggacagaaaggtgacccaggatttcca
ggtcttccaggcatacctggcccaccaggctccatgggaataccaggtccaattggccct
ccagggcccccaggtttgacgggatctcctggtccaccagggctgccaggacccaagggt
aatatgggtttgaatttccaaggacccaagggtgaaaaaggtgaacaaggtcttcaggga
cctccagggccaccaggacaaattggagaacagaaaagaccaaatgacattgagtttcag
aaaggagatcagggtattccaggtgatccaggcccaccaggacttcctgggccaccaggt
cctcctggtcttcctggtggtgtaaaaggtgaaaaaggtgagcaaggagaaccaggcaaa
agaggaaagcctggcaaagatggagaacctggtcagcctggtagggatggattacctggt
gggcctggaataaatggtgctccaggaagagatggagaaaagggtgaaaaaggtgacatg
ggtccccctggtcctcctggaattgttgttccaaggccaggcattggtgcaacagtggga
ccaaaaggtagcaaaggattgccaggacttccaggagccaaaggagagcgtggattctct
ggtaggccaggcccacctggcttcccaggatctccagggatcactactgttggacctcct
ggcccacctggcttacctggtgagagaggacagaagggagatccaggtttacctggcgtt
tctattcctgggcaaccaggagttgagggaccacaaggacctccaggaccaccaggtccc
ccagggccacctgcaccatctattgctcctggtaaagagttatgtgagcaagggccacca
ggtcctccaggaattccaggacaacaaggttttaccggggaacgaggccaaaaaggtgat
cgaggagacacatgcttcaactgcataggaactggagtaactggtcctcctggggagaga
ggaccaccaggacctccgggtagtccaggttctcctggctttcctggaccaaaaggtgaa
aaggggcttcctggattaactggccttgtagggccaccaggctttccaggcatcccaggt
gctcctggcagacctggtcctaaaggagacccaggggatgtcttgacttctccaagaatg
aaaggtgacaaaggagaccctggcctcccaggaccaccaggtctccctggcatagatggc
actcctggacgagatggactgccaggtttgcctggccctaagggggaacctggtagtatt
gcattcaaaggagaaatgggtattccaggtaaaccagggataccaggccttcctggagaa
aaaggacttcctggacctcctggttttggtccacaaggctcacctggtgaaaagggcatc
caaggtgtatccggccgtccagggcctcctggtgttccgggtccaaaaggtgaccctggc
cagactattacagagccaggagttcctggtccccctggtcctccaggaagaaatggtgat
ccaggtcttccaggagatcctggtcagccaggtcagcgtggtttacccggcatcccaggt
gcaaagggagagccaggtattcctggtattggacttccaggtccaccaggcccaaagggt
ttcccagggactccaggcccacctggagctccaggaactccaggtcaccctggtctggat
ggacctcctggaccacctggtctcccaggacagaagggagatcgtggatttggagttcca
ggaccacctgggcccccaggacccccaggcataaaaggagttcaaggacctaaaggtgat
cctggcttcccaggaaaccctggtctccctggccgagcaggctttgatggaatccctggg
cccaaaggtgaccctggaccaagtgggccaccaggacttccaggcccaccaggcatccct
ggcattggtggtcaaggtcctcctggatctccaggacctccagggcctgttggcccccca
ggtcccccagggtcgcaaggcattccaggggagaaaggggatccaggtcctccaggcttc
gatattcctggccctccaggtgaccaaggagctccaggatatccaggaccccctggaatt
ccagggcctaagggttcacctgggccacctggcagggatggactacctggatttccaggt
gccaaaggtgagatgggcgtcatgggagctcctggtcttccagggcctccaggaactcct
ggaagaaatggcctgcctggcttgaaaggtaatagtggattacctggtccaccagggcct
cctggtccaatggggcagaaaggcatcaaaggtgaagcaggtctgccgggtccacccgga
acaattgatcccaaacagctgggagcaaaaggagaaaaaggcgagccaggtgttccaggt
attcctggtttatcaggccagaaaggttatcaaggtctcccaggtgacccaggcccacca
ggacttcatggcccaccaggtgtgccaggattgccaggccccaagggagacatggggctt
cctgggcagccaggaccaacaggacctccaggattaaaaggagctatgggagagatgggc
cttccaggtgctcctgggcttaaaggcagccaaggagtagcaggacgtccggggcagcct
gggcctgtgggatttcctggattgaaaggggagaaaggtgatcctggtctttcaagcatt
ggtatccatggtccccctggaccaaagggagatcgtggcttgcctggatacccaggtagt
ccaggctctaaaggtatagctggaagtcctggtttgcctggattttcaggcagtccaggt
gcaaaaggagaaccaggtcttcctggattcccaggaacaccaggaattccaggaccaaaa
ggtattgagggccctccaggtactcctggccttcctggaccacctggaccagtaggtgat
attggtcgtcctggtcctcctggtccttcaggagaaaagggacaacctggtcgagatggt
atccctggaccagcgggtcagaagggtgaaccaggtctaccaggttttgggcatccagga
cccccaggactcccaggattgtcagggcaaaaaggagaactggggttacctggcccacca
ggaccccctggacttccaggtctgaagggagaaccaggtttccagggattccctggtctg
cagggtccaccaggtccaccaggaataccagggccacctctggaaggtcctaagggtagc
cctggcccaccaggtgttccaggaaggccaggtccctcaggtcctccaggtccaccaggc
ccagaaggtccacgaggaccaccaggcagtggaggacttaaaggggaaaaagggaaccca
ggtccacctggtccagctggcctgactggtccaaagggagatcaaggaccacctggacgc
cagggggatcctggtcgtccaggtctgaatggaatgaagggtgaccccggggttccaggc
gttccaggattcccaggtatgaagggtcccactggacctgcaggacctgctggcctcaca
ggcagccagggactgccgggcccaccaggtccgccaggtttaccaggtaccattggacga
agcattgttgtcaaaggtgatcctggttccccaggtccaccaggacagcctgggtccaaa
gggccacctggattgccagggccacagggattgccaggtccaattggccttcctggtgac
ccagggagagatgggcttcctggttttgatggtccagcaggacgaaaaggagagagaggt
cttccaggccaaccaggttcacgaggaatacaaggacctcctggtcctgatggcttacaa
ggcccacctggtcctcctggcacaccttctgttgctcatggattccttataactcggcac
agccagaccagcgatacaccactatgcccacaggggacatcaagagtttatgatggattc
tctcttttatatgtgcaaggaaatgagagagcacacggccaggatttgggtactgctggg
agctgtcttagacgtttcagcaccatgcccttcatgttctgcaacatcaacaatgtttgt
aactttgcatcaaggaatgactattcctactggctgtcaaccccggagtcgatgccaatg
agcatggagccactgactgggcaaagcatccagccattcattagccgatgtgttgtgtgt
gaagctcctgctatggtgatagctgtccacagtcagaccattcagatcccttcatgtcct
tcaggctgggactccctctggattggctactctttcatgatgcacacgagtgctggagca
gagggctctggacaggccttggcatcgcctggatcctgtctggaagaatttcgctcagca
ccgttcatcgaatgccatggtcggggcacctgtaattattatgccaattcatacagtttc
tggctggcaactgttgaggtctcagaaatgttcagcaaacctcagtcagagacactgaaa
gctggagacttgaggacacgtattagtcgttgtcaagtttgcatgaagaagacgtaa
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integrated database retrieval system
