Cyanistes caeruleus (blue tit): 111928695
Help
Entry
111928695 CDS
T05602
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04382
Cornified envelope formation
ccae04510
Focal adhesion
ccae04512
ECM-receptor interaction
ccae04518
Integrin signaling
ccae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111928695 (COL4A5)
04518 Integrin signaling
111928695 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111928695 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111928695 (COL4A5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111928695 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccae04147
]
111928695 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
ccae00536
]
111928695 (COL4A5)
Exosome [BR:
ccae04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111928695 (COL4A5)
Glycosaminoglycan binding proteins [BR:
ccae00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111928695 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111928695
NCBI-ProteinID:
XP_023781877
LinkDB
All DBs
Position
4
AA seq
1578 aa
AA seq
DB search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NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaagcatcagttttgatttaaatctgtttaggaggaaacttcacccacagaat
tacactgctaaactcctgagaggacagcataacactggtactggaaaatttggactaggt
gaagcaggtgaaataattacatccttgctgccaggacagaaaggtgacccaggatttcca
ggtcttccaggcatacctggcccaccaggctccatgggaataccaggtccaattggccct
ccagggcccccaggtttgacgggatctcctggtccaccagggctgccaggacccaagggt
aatatgggtttgaatttccaaggacccaagggtgaaaaaggtgaacaaggtcttcaggga
cctccagggccaccaggacaaattggagaacagaaaagaccaaatgacattgagtttcag
aaaggagatcagggtattccaggtgatccaggcccaccaggacttcctgggccaccaggt
cctcctggtcttcctggtggtgtaaaaggtgaaaaaggtgagcaaggagaaccaggcaaa
agaggaaagcctggcaaagatggagaacctggtcagcctggtagggatggattacctggt
gggcctggaataaatggtgctccaggaagagatggagaaaagggtgaaaaaggtgacatg
ggtccccctggtcctcctggaattgttgttccaaggccaggcattggtgcaacagtggga
ccaaaaggtagcaaaggattgccaggacttccaggagccaaaggagagcgtggattctct
ggtaggccaggcccacctggcttcccaggatctccagggatcactactgttggacctcct
ggcccacctggcttacctggtgagagaggacagaagggagatccaggtttacctggcgtt
tctattcctgggcaaccaggagttgagggaccacaaggacctccaggaccaccaggtccc
ccagggccacctgcaccatctattgctcctggtaaagagttatgtgagcaagggccacca
ggtcctccaggaattccaggacaacaaggttttaccggggaacgaggccaaaaaggtgat
cgaggagacacatgcttcaactgcataggaactggagtaactggtcctcctggggagaga
ggaccaccaggacctccgggtagtccaggttctcctggctttcctggaccaaaaggtgaa
aaggggcttcctggattaactggccttgtagggccaccaggctttccaggcatcccaggt
gctcctggcagacctggtcctaaaggagacccaggggatgtcttgacttctccaagaatg
aaaggtgacaaaggagaccctggcctcccaggaccaccaggtctccctggcatagatggc
actcctggacgagatggactgccaggtttgcctggccctaagggggaacctggtagtatt
gcattcaaaggagaaatgggtattccaggtaaaccagggataccaggccttcctggagaa
aaaggacttcctggacctcctggttttggtccacaaggctcacctggtgaaaagggcatc
caaggtgtatccggccgtccagggcctcctggtgttccgggtccaaaaggtgaccctggc
cagactattacagagccaggagttcctggtccccctggtcctccaggaagaaatggtgat
ccaggtcttccaggagatcctggtcagccaggtcagcgtggtttacccggcatcccaggt
gcaaagggagagccaggtattcctggtattggacttccaggtccaccaggcccaaagggt
ttcccagggactccaggcccacctggagctccaggaactccaggtcaccctggtctggat
ggacctcctggaccacctggtctcccaggacagaagggagatcgtggatttggagttcca
ggaccacctgggcccccaggacccccaggcataaaaggagttcaaggacctaaaggtgat
cctggcttcccaggaaaccctggtctccctggccgagcaggctttgatggaatccctggg
cccaaaggtgaccctggaccaagtgggccaccaggacttccaggcccaccaggcatccct
ggcattggtggtcaaggtcctcctggatctccaggacctccagggcctgttggcccccca
ggtcccccagggtcgcaaggcattccaggggagaaaggggatccaggtcctccaggcttc
gatattcctggccctccaggtgaccaaggagctccaggatatccaggaccccctggaatt
ccagggcctaagggttcacctgggccacctggcagggatggactacctggatttccaggt
gccaaaggtgagatgggcgtcatgggagctcctggtcttccagggcctccaggaactcct
ggaagaaatggcctgcctggcttgaaaggtaatagtggattacctggtccaccagggcct
cctggtccaatggggcagaaaggcatcaaaggtgaagcaggtctgccgggtccacccgga
acaattgatcccaaacagctgggagcaaaaggagaaaaaggcgagccaggtgttccaggt
attcctggtttatcaggccagaaaggttatcaaggtctcccaggtgacccaggcccacca
ggacttcatggcccaccaggtgtgccaggattgccaggccccaagggagacatggggctt
cctgggcagccaggaccaacaggacctccaggattaaaaggagctatgggagagatgggc
cttccaggtgctcctgggcttaaaggcagccaaggagtagcaggacgtccggggcagcct
gggcctgtgggatttcctggattgaaaggggagaaaggtgatcctggtctttcaagcatt
ggtatccatggtccccctggaccaaagggagatcgtggcttgcctggatacccaggtagt
ccaggctctaaaggtatagctggaagtcctggtttgcctggattttcaggcagtccaggt
gcaaaaggagaaccaggtcttcctggattcccaggaacaccaggaattccaggaccaaaa
ggtattgagggccctccaggtactcctggccttcctggaccacctggaccagtaggtgat
attggtcgtcctggtcctcctggtccttcaggagaaaagggacaacctggtcgagatggt
atccctggaccagcgggtcagaagggtgaaccaggtctaccaggttttgggcatccagga
cccccaggactcccaggattgtcagggcaaaaaggagaactggggttacctggcccacca
ggaccccctggacttccaggtctgaagggagaaccaggtttccagggattccctggtctg
cagggtccaccaggtccaccaggaataccagggccacctctggaaggtcctaagggtagc
cctggcccaccaggtgttccaggaaggccaggtccctcaggtcctccaggtccaccaggc
ccagaaggtccacgaggaccaccaggcagtggaggacttaaaggggaaaaagggaaccca
ggtccacctggtccagctggcctgactggtccaaagggagatcaaggaccacctggacgc
cagggggatcctggtcgtccaggtctgaatggaatgaagggtgaccccggggttccaggc
gttccaggattcccaggtatgaagggtcccactggacctgcaggacctgctggcctcaca
ggcagccagggactgccgggcccaccaggtccgccaggtttaccaggtaccattggacga
agcattgttgtcaaaggtgatcctggttccccaggtccaccaggacagcctgggtccaaa
gggccacctggattgccagggccacagggattgccaggtccaattggccttcctggtgac
ccagggagagatgggcttcctggttttgatggtccagcaggacgaaaaggagagagaggt
cttccaggccaaccaggttcacgaggaatacaaggacctcctggtcctgatggcttacaa
ggcccacctggtcctcctggcacaccttctgttgctcatggattccttataactcggcac
agccagaccagcgatacaccactatgcccacaggggacatcaagagtttatgatggattc
tctcttttatatgtgcaaggaaatgagagagcacacggccaggatttgggtactgctggg
agctgtcttagacgtttcagcaccatgcccttcatgttctgcaacatcaacaatgtttgt
aactttgcatcaaggaatgactattcctactggctgtcaaccccggagtcgatgccaatg
agcatggagccactgactgggcaaagcatccagccattcattagccgatgtgttgtgtgt
gaagctcctgctatggtgatagctgtccacagtcagaccattcagatcccttcatgtcct
tcaggctgggactccctctggattggctactctttcatgatgcacacgagtgctggagca
gagggctctggacaggccttggcatcgcctggatcctgtctggaagaatttcgctcagca
ccgttcatcgaatgccatggtcggggcacctgtaattattatgccaattcatacagtttc
tggctggcaactgttgaggtctcagaaatgttcagcaaacctcagtcagagacactgaaa
gctggagacttgaggacacgtattagtcgttgtcaagtttgcatgaagaagacgtaa
DBGET
integrated database retrieval system
