Cyanistes caeruleus (blue tit): 111928941
Help
Entry
111928941 CDS
T05602
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccae04131
]
111928941 (LRBA)
Membrane trafficking [BR:
ccae04131
]
Endosome - Lysosome transport
Others
Others
111928941 (LRBA)
Endosome - Golgi transport
111928941 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
111928941 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
DUF4800
WDR90_beta-prop_4th
SUKH_6
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
111928941
NCBI-ProteinID:
XP_023782203
LinkDB
All DBs
Position
4
AA seq
3111 aa
AA seq
DB search
MASEGRQVVQPTGDDGGGAGKEGNAAEGGSVLQPLNPGVPIRGIKMKFAVLTGLVEVGEV
SNRDIVDTVFNLLVGGQFDLEMNFIIQEGEGITSMVDLLDKCDITCQAEVWSMFTAILKK
SIRNLQVCTEVGLVEQVLRRIDRAENMIADLLVDMLGVLASYNLTVRELKLFFSKLQGEK
GRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ
MTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLSSAIAFM
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGVQVLFPLF
AQLDYRQYSSDHIDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVIGYSLEKSSKAHV
TRAVLELCLAFSKYLSNLHNGVPLLKQLCDHVLLNPAIWIHIPAQVQLTLYTYLSTEFVA
TVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGIDGPRPTQKEILSLRAFLLM
FIKQLVMKDYGIKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPGSMIPAFDQRNG
LQVVYKLLASQSEGIRVQALKVMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTSLFT
MTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPQILKVIAILIRNSPQCPETLEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTIFRILLYH
AIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYKEYQGKGGEGSGVHSSTPIRTISG
ISKEAETMGKQQSLELEENAAAHSCITAGDTQCRTEKNEKENSSDGGQQTHSVSNHKEEL
EGEDMGTTKDLKAVPCVEFSPEPETVKASVSEISTGIAEAIEDFNKAVELVEETVAVTAA
SLAMQTPVEGETPTSPERLEKLSGEVEDEDDFVDLKDESSLSLPSEELAERNKECDSNAS
EVTKQEETPEKQPEPGRLKSEGTESVDEKKQELTLPEMVSSAVPEVVTQPDSAGKKKLKE
GNVITSETKTTVENANAHVAEPAGASDKRIAKLDVSSVASDTERLELKANMCLEAPLPPR
SMPERYLLTDALQSAPFFLKGGKPFSTATYSTPLPSRQQVSSGQELAAPSDGQRRDMRSG
VFRIPEFKWSLMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVVFVHNTIHLIS
QVMDNMIMACGGILPLLSAATSATHELENIEPTQGLSVESSLTFLQRLINLVDVLIFASS
LGFTEIESEKNMSSGGILRQCLRLVCAIAVRNCLECQQHAQIKPIGDTGKNKKAVQGFVG
SGKSAAKSPVDIVTGGISPIRDHDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFI
SVLMVSKYRDILEPQNERRPPNQSQSLKESENENETPAAVVESPSVALGASASTEDSEST
ASMQRRDSGLGEEAAPAQTNCSGGAAEAGPLSVSAGPDAVSEVLCTLSLEVNKSQESGSE
TGTEESKSVASVPAAKNVNVKDILRSLVSTPADGTAVDAALLPPTFLGVLGDGAAEQPVQ
FHSFDRSVVVPTKKSSISSSTASIGAPTNAVSVVSSVDSSQAPDLSGESPGRGSSNSKLP
SVPAVSSVPEDSVSNMSITDRLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEG
TSLMCMKPSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKEHLVRVANE
AEFILSRQRAEDINRHAEFESLCAQYSADKREEEKMCHHLIMAAKYRDQVTATQLIQKII
NILTDKHGAWGSSAPSRPHEFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLRAAGEHGQC
KIFLLPPAAGYRMWWERLDVLPCRMLANGPKAKALGFAFQACFPYRDNLAVPSQQQQRWC
LLSPFFPSQLSWHVVHTLHTTITAQPQPDRRKVDAILPLIQGQTSLVNYCIHTCMHMTTQ
IVCGDRFYAGWGIKTVGNISIKAIDGVQDFVAARDQQVIISNFVAAVPEGDGSAAGAVWD
GNVTARARRGHIPRPGDRVRGGTWLQACLATSLPSRKSQREPRNGPWEAGVAGGRVPWEQ
VPAAIPGQIGPLTPWHGGVGAFLPPELGLPPAGAGGMRGGSSSAAPACPGCRAVPGGPRQ
EQPRCRGLRARAAAGAAPILAYTEGLHGKWLFSEIRSIFSRRYLLQNTALEIFMANRVGV
MFNFPDQATVKKVVNCLPRVGIGTIFGLPQTRRISLASPRQIFKASNMTQRWQHREISNF
EYLMFLNTIAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAAF
FAERYESWEDDQVPKFHYGTHYSTASFALTWLLRIEPFTTLFLNLQGGKFDHADRTFSSI
SRAWRNSQRDTSDIKELIPEFYYLPEIFVNSNNYNLGVMDDGTVVSDVELPPWAKTPEEF
VRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLSSITDSVL
REAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVYLLLQSPLMFTEQAQQDVIMVLKFPSNS
PVTHVAANTQPGLTTPAVITVTANRLFAVNKWHSLPAHQGAVQDQPYQLPVEIDPLIASN
TGMHRRQITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDSGKLMQVVFGHW
DVVTCLARSESYIGGNCYILSGSRDATLLLWYWNGKTNIIGDNPRGDFATPRAVLTGHDY
EITCAAICAELGLVISGSKEGPCLIHSMNGDLLRTLEGRERLQGPESCLRPKLIQASREG
HCVIYYENGLFCVFSVNGRLQATMETDDKIRAIQLSRDGQYLLTGGDNGVVMVWQVWDLK
RLFAYPGCDAGIRSMALSYDQRCIMTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
9336 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaaggcagacaagttgttcagccaacaggtgatgatggaggaggagcggga
aaagaaggaaatgctgctgaagggggaagtgtgctgcagcctttgaatccaggagtccct
atccgaggcatcaagatgaaattcgctgtgctgacaggactggtggaagttggtgaagtg
tccaacagagacatagttgacactgtgtttaacctgcttgttgggggccagtttgacttg
gaaatgaactttatcatccaagaaggagagggcatcacctccatggtggacttactggat
aagtgtgatatcacctgccaggctgaggtttggagcatgtttacagcaatactgaagaaa
agcatacggaatctccaggtctgcacagaagtggggcttgtggaacaagtgctcaggagg
attgatagagctgaaaacatgattgcagatctcttagtggacatgctgggtgtgttggct
agctataacctgacagttcgagagctgaagttattcttcagcaagctgcaaggagaaaaa
gggagatggccaccacatgctgggaagttactgtctgtgttaaaacacatgcctcagaag
tatggacctgatgccttcttcaactttccaggaaaaagtgctgcagctattgccttacct
cctatagccaagtggccataccagaatggatttactttccacacttggctaagaatggat
cctgtaaataatattaatgtggataaggataagccttatttatattgttttcgaacaaac
aaaggacttggttattctgctcactttgttggaggctgcttgattgtaacgtccataaaa
tcaaagggaaaaggtttccagcactgtgtaaaatttgatttcaagccacaaaagtggtac
atggtgactatagtgcacatctataaccgctggaagaacagcgaactccggtgttatgtg
aacggggaactggcatcttatggggaaataacgtggtttgtcaacaccagtgatacattt
gacaaatgtttcctgggctcttcagaaacagcagatgccaatcgagtgttttgtgggcag
atgacatctgtttacctttttagtgaggctctcaatgctgctcagatctttgccatttat
cagcttggcctgggatataagggaacgttcaagttcaaggcagaaagtgatctcttcctc
gatgaacatcacaaattgttgctatatgatggcaaactctccagtgctattgcttttatg
tacaatccaagggctacagatgcacagctgtgtctagagtcatcccctaaggataaccct
tctatttttgttcattcaccacatgccctcatgctgcaggatgtgaaagcagtcttgaca
cactcgatccaaagtgccctgcactccattggaggagttcaggtgcttttccctctcttt
gcacagttggactataggcaatattcctcagaccacattgatacaactgtttgttctact
ttactggcattcatcatggagttgttgaagaactctattgctatgcaagaacagatgctt
tcctgtaaaggtttccttgtgataggatacagcctagaaaagtcttccaaagcccacgtt
accagagctgtgctagaactttgccttgccttctcgaaatacctgagcaatttacacaat
ggggtgcccctgctaaagcagctgtgtgatcatgttctcctgaatcctgcaatatggatt
catatcccagcacaggttcagctgaccttgtacacttacctgtcgactgagtttgttgcc
actgttaacatttatggagcaatccggcgggttgggacagttctgttggtcatgcacacc
ctcaagtattattactgggtggtgaaccctcaggatcgcagtgggataactcccaagggc
atagatgggccacggcctactcagaaggagattctatccctgcgagcatttttgctgatg
ttcattaaacagctagtgatgaaggactatggaataaaagaagatgaattacaggctatc
ctcaattacctacttactatacatgaggatgacaatctaatggatgtcctgcagttgctg
gttgctctgatgtcagagcatcctggttctatgatccctgcatttgatcagaggaatgga
ttacaggttgtctacaagcttttagcatcacaaagtgaaggcatcagggtgcaagctctg
aaagtgatgggatatttcttaaagcatcttgctccgaagagaaaagctgaagtcatgctt
ggacatggattgttctctttgttggctgaaaggctgatgcttcagacaagcttattcacc
atgaccacgtacaatgtcctgtttgagattctgactgaacagatttgcactcaagtaata
cataaacaacatcctgacccagattcaacggtgaagatacaaaatcctcagattttgaag
gttattgcaatcctgatccgtaattctccacagtgtccagaaactctggaggtccggcga
gcctttctctcagatatgattaaactgtttaataacagcagagaaaacaggaggagtttg
ttgcagtgctctgtctggcaggagtggatgctttccctttgttgttttaatccaaagact
tctgaggagcagaagataactgagatggtgtacaccatatttcggattttgctgtaccac
gcgataaaatatgagtggggtggctggcgtgtgtgggtggatacactgtcaatcacacat
tcaaaggtgacttttgaaatgcacaaggagagtctttcccaaatgtacaaggagtaccaa
gggaaaggaggtgaagggagtggagtacattcttcaactccaattagaacaatctctggg
attagcaaagaagctgaaaccatgggaaaacaacaatctctggagttagaagaaaatgct
gctgctcattcttgcattactgctggtgatacgcagtgcagaactgaaaaaaatgagaaa
gaaaactcatcagatggtgggcaacaaactcattcagtgtctaatcataaggaggaatta
gagggggaggatatgggtactacaaaggatttaaaagcagtgccttgtgtggaattttct
ccagaaccagaaacagtgaaggccagtgtgtcagaaatcagtactggaatagctgaagca
attgaagattttaacaaagctgttgagcttgtggaagaaacagttgctgtcactgctgcc
tctttagccatgcaaacccctgtggaaggagaaactcccactagtccagaaagactggaa
aaattatcaggagaggtggaagatgaagatgactttgttgatttgaaagatgaaagtagt
ttgtctttaccttcagaagaacttgcagaaagaaacaaggaatgtgactctaatgcaagc
gaagtgacaaagcaggaagaaacaccagagaagcaacctgaacccgggcgtttaaaatct
gagggtactgaaagtgtggatgagaagaaacaagagctgactttgccagagatggtgagt
tctgcagttccagaagtagtaactcagccagattcagcaggaaaaaagaagctgaaggaa
ggaaatgtaattactagtgaaaccaaaacaactgtggaaaacgcaaatgcacatgtggca
gaacctgctggagcctctgacaaaagaattgccaagcttgatgtctccagtgttgcatca
gatacagaaagactggagctgaaagctaacatgtgtctagaagcacctctgccccccaga
tccatgcctgagagatacctcctaacggatgctcttcagtctgcaccattcttccttaaa
ggaggaaaaccattttctacagcaacatattctacccccctgccctcaagacagcaggtt
tcctcaggacaggagctggctgctccatcggatgggcagaggagggacatgaggtcaggt
gtgttccgtattcccgagttcaagtggtcactgatgcaccagcgcctgctcacagacctg
ctcttctccatagaaacagatattcagatgtggagaagccattctacaaaaactgtgatg
gattttgtgaatagcagtgacaatgtggtgtttgtgcacaacacaatccatctcatctct
caagtgatggacaacatgatcatggcctgtggtggtatcttgccattgctttctgctgcc
acatctgctactcatgaattggagaatattgagccaactcaaggactttcagtagaatca
tctttaacatttctccagagattaatcaaccttgtagatgtgctaatttttgcaagctct
cttggtttcactgaaattgagtctgagaaaaatatgtcatctggaggaattctgcgacaa
tgtcttcgtctggtgtgtgcaatagcagtaagaaattgcttggagtgtcagcagcatgca
cagataaagcctattggagacactggcaagaataaaaaagcagtgcaaggttttgtagga
tcaggaaaatctgcagcaaagagtccagtggacattgtgactggtggcatttctccaata
agggaccatgacagacttctgcaggatatggatattaatcgcctccgagcagtagtgttc
agagatatagaagatagtaaacaggctcagtttttggctttggctgttgtatattttatt
tctgtgctcatggtttcgaaatacagagatatactggaaccccagaatgaaagacgacca
ccaaaccaaagccagtcactcaaggaatcagaaaatgaaaatgagactcctgctgcagtc
gtggaaagcccatctgttgctcttggtgcttcagcctctactgaagattcagaaagtaca
gcatctatgcagagaagggattctggtcttggggaggaagcagctccagcacaaacaaac
tgttcaggtggtgctgctgaagcaggacctctgagtgtcagtgcaggtccagatgcagtc
agtgaagtcctgtgcacgctctcgttagaagtcaataaatctcaggagagcggaagtgag
acaggaactgaagagagtaaatctgtggcttctgtgccagctgcaaaaaatgtcaatgtg
aaggacatcttgagaagcctggtgagcacaccagctgatgggactgcagtggatgctgct
cttctgccaccaaccttccttggagttcttggtgacggagctgctgagcagcctgtgcag
ttccattcctttgacaggagtgttgttgtacctacgaagaaatcaagcatttcatcttct
acagcttctattggtgctcctacaaatgctgtcagtgtggtttcttctgtagattcatcc
caagccccagatttgtcaggagaatctcctggaaggggatcatctaattcaaaattgcca
tctgttcctgcagtttcttcagtgcctgaggattctgtctccaatatgagtattacagac
aggcttgagcatgctttggaaaaagctgccccacttctgagagagatttttgtggatttt
gctccctttctttctcggactcttttgggcagccatgggcaggagttgctgatagaaggt
acaagtcttatgtgcatgaaacctagcagttcagttgtggagctggtgatgctcctttgc
tctcaggagtggcaaaactctatacagaaaaatgctggcctggcctttattgagcttgtc
aatgaaggaaggctgctgagtcaaaccatgaaggagcatctggtacgagtggctaatgaa
gcagaatttatcctgagcagacagagggcagaggatattaaccgccatgctgaatttgag
tcactgtgtgcccagtactctgcagacaaacgggaagaagaaaaaatgtgtcatcatttg
atcatggcagccaagtaccgggaccaggtgactgcaacacaactaatacaaaaaatcatc
aacatcctgactgacaagcatggagcctggggaagctctgcaccaagtcgtcctcatgag
ttctggcgcctcgactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaac
cccctcggatcgacacatcctgaagcgacactcagggcagccggagaacatggtcagtgt
aaaatcttcctcctgccaccagcagcaggttacaggatgtggtgggaaaggctggatgtt
cttccttgtaggatgctagcaaatggtcccaaagcaaaggctcttggctttgcatttcag
gcgtgttttccgtacagagataacctggccgttccctcacagcagcagcagcgctggtgt
ttgctcagccccttctttccatctcagctgagctggcacgttgtgcataccttgcataca
acaattacagcacagccccaaccagacagaagaaaagtggatgcaattttgccattaatc
cagggacagacttcccttgtgaattactgcatacatacatgcatgcatatgaccacacaa
attgtgtgtggggatagattttatgctggatgggggattaaaacagtcggtaacatttcc
atcaaggcaatagatggagttcaggactttgtggctgcaagggaccagcaggtgatcatc
tccaatttcgtggcggcagtgccggaaggcgatgggagcgctgccggggccgtgtgggac
gggaatgtcactgcccgggcacggcggggacacattccccggcccggtgaccgtgtgcgg
ggcggaacatggctccaagcgtgcttggccacttcccttccatcccgaaaatcccagcgt
gagcccagaaatggcccgtgggaggccggggtagcgggtggccgtgtcccctgggagcag
gtgccagccgccatcccggggcagattggccccctcacgccctggcatggaggggtgggg
gctttcctgcctcccgagctcggcttgccgccagcgggagcgggagggatgaggggcggc
agctccagcgccgctccggcttgtcccggctgccgggctgttcccggcgggccgcggcag
gagcagccccggtgccggggactgagggcccgggccgcggcaggagcagccccgattctg
gcatatacagaaggactccacggaaaatggctcttctcagagattcgatctatcttttcc
cgacgttacctcttgcaaaatacagcactggagatattcatggcaaatagagtgggtgtc
atgttcaacttccctgatcaagcaacagtgaagaaagtggttaactgtctacctcgggtt
ggtattggtaccatctttggactaccccagaccagacgcatttctttggctagtccacga
cagatcttcaaagcttccaatatgactcagcggtggcaacaccgagagatttccaacttt
gaatacttgatgtttctaaacactatagcaggtcgaacttacaatgatttgaatcagtac
cctgtcttcccttgggttatcaccaactatgagtcagaggaattggacctcacacttcct
agcaacttcagggatttgtcaaagcctattggagctttgaacccaaagagagcagcattc
tttgctgagagatatgaatcatgggaagatgatcaggtcccaaaatttcactatggcact
cattattctacagcaagttttgcactcacgtggttgttaaggattgaacccttcacaaca
cttttcctaaatctacaaggtgggaagtttgatcatgcagataggacattttcgtctatt
tcaagagcatggcgcaacagtcagcgtgacacttctgacatcaaggaattgattcctgaa
ttttattacctcccagagatatttgtcaacagcaacaattacaatctgggagtgatggat
gatggaacagtggtgtctgatgttgaacttccaccgtgggccaaaaccccagaagaattt
gttcgcataaacaggctggcattagaaagtgagtttgtttcctgccagcttcaccagtgg
attgatcttatttttggctacaaacaacaaggaccagaggctgttaggtccctgaatgta
ttctactatttgacttacgaaggagctgttaatttaagttcaataacggattctgtactg
agagaggctgtggaagctcaaatacgaagttttggacagaccccttcccaactgctcata
gaaccacatcctccaagaagttctgccatgcaggtgtatctcctcctgcagagccccttg
atgttcacagagcaagcccaacaggatgttatcatggtcctgaagttcccgtccaactcc
ccggtcactcacgtggctgccaacacccagcctggcctgactactcctgctgtgatcacg
gtcactgcaaacaggctctttgctgtgaacaagtggcacagcctccctgctcatcaaggt
gctgtacaagaccagccttaccagctgccagtggaaatcgatcctctcatagccagcaat
acaggtatgcacaggaggcaaatcactgaccttttagaccaaagcattcaggtacattcc
cagtgttttgtcatcacctctgacaatcgttacatcttggtctgtggcttctgggacaag
agtttccgcgtttactctactgactcaggtaaactgatgcaagtagtgtttggccactgg
gatgttgtgacctgtctggctcgttctgagtcctacatcggggggaattgttacatcctc
tcaggatctcgggatgcaaccttgctgctctggtactggaatggcaaaaccaacatcatc
ggtgataacccaagaggtgatttcgcaactcctcgagctgttctgacaggacatgactat
gagatcacctgtgctgccatttgtgctgagcttggcctggtaataagtggttcaaaagaa
ggaccatgtcttatacattctatgaatggagatctactgaggacattagaaggtcgtgaa
agattacaaggtcccgaaagctgcctgagaccaaaacttattcaagcttccagagaaggc
cactgtgtcatatattatgaaaacggcctcttctgtgtgttcagtgtgaatgggagactg
caggccactatggaaacagatgacaagataagggccattcagctgagtcgggatggacag
tatctgctgacaggtggagacaatggggttgtcatggtctggcaggtgtgggacctcaaa
cggctctttgcttacccagggtgcgatgctggaatccgatccatggccctgtcctatgac
caaaggtgcataatgactggaatggcgtccgggagcatcgtggttttttacaatgatttc
aatcgctggcaccacgagtaccaaaccaggtactga
DBGET
integrated database retrieval system
