Cyanistes caeruleus (blue tit): 111929239
Help
Entry
111929239 CDS
T05602
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111929239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111929239
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111929239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
111929239
NCBI-ProteinID:
XP_023782521
LinkDB
All DBs
Position
4
AA seq
495 aa
AA seq
DB search
MSQHALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGASASA
KLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQ
RRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVGGRMKAGPPP
NRKLGGTIDVIGGQAGTIRRVEGRRRDKHATEENPIQVLGDHGSKPQPPQQPQQPSQPQQ
PPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLA
PPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTVDKGTSSSSS
SHWEYSGSRRERERERERERERERDRDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYR
RSRDRSREREERHRERRHRDKDDGSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKET
SEDGAQEGEEQDTKE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcacgcccttcccagtggtgaggatgatgaggatgacagtgacagcgacagc
gatgacgatgacgtgaaggtcacaattggcaacatcaagacgggagcgccgtcctacatg
ggaactcctatgaatctaaacttaaaaacgggtagaggctatggagcatcagcttcagcc
aagttgcagcccaaaggtattgacttggatgccgcagggaatattaatggattgcctgtg
atagaagtggatttggattcatttgaagacaaaccgtggaggaaaccaggtgctgatctt
tctgattactttaattatggattcaatgaagaaacatggaaagcttattgtgaaaagcag
cggcggcttcagctggggctggaccctgctcctcccatcagcactgagaacaagatcacg
gttcagcagggaagaacaggaaatgctgaaaaagaagtggaaaacaacatcatcaaaaca
gagttcaaaacagatttcttggctctggtgggaggacgaatgaaggctgggcctcctccc
aacaggaagctgggtgggaccattgatgtgatcgggggccaggcaggcacgatccgcagg
gtggaagggagacgtcgggataaacacgccacggaggaaaaccccattcaggtcctggga
gaccacggcagcaagccccagcccccccagcagccccagcagccctcgcagccccagcag
cctcctcagcagcagccgttcgctccaccagcagggcctccacctcccccgctcgccggt
cctcctcctccgcatttcctgcaccctcctcctccagtgacttctgttccacctcccctg
catcctccaggcctgccacctccaggtccaattccagggttgttcccaccacctctggca
ccaccaccagctctcctcatcccaaccttggatgggcagccagccagctacaacaacagg
cagccacctccctttggctacaactctgcagattcaggtttcatcagctacccccccatc
tccacgtcccacacgccctgggtgaccacggtggacaagggcacaagcagctccagcagc
agccactgggaatactcgggctccaggcgggagagggagcgcgagcgtgagcgtgaacgg
gagagggagcgagaccgagaccgcgaccgcaccccgaccaccagtgaatacaacaatgac
gacgagcggtaccgctactacagccgcgagcgcagctacgacttcgagcgcgattaccgg
cgcagccgcgaccgcagccgcgagcgcgaggagcggcaccgcgagcgccgccaccgcgac
aaggacgacggcagcaaacacaaatcctcccgcaggaagcagcacgagagcgaggagggg
gagagccaccggcgccacaagcacaaaaagaacaagcggagcaaggaggagaaggagacc
agcgaggacggagcccaggagggcgaggagcaggacaccaaggagtga
DBGET
integrated database retrieval system
