Cyanistes caeruleus (blue tit): 111929323
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Entry
111929323 CDS
T05602
Name
(RefSeq) transcription factor SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccae03000
]
111929323
Transcription factors [BR:
ccae03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111929323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111929323
NCBI-ProteinID:
XP_023782651
LinkDB
All DBs
Position
4
AA seq
266 aa
AA seq
DB search
MNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLRAVHMKE
YPDYKYRPRRKTKTLLKKDKYSLPGNLLAPGGGSAVSSPVGVGQRIDTYAHMNGWTNGAY
SLMQEQLGYSQHHPGMNSPQLQQMHRYDMTGLQYSPMMSTAQSYMNAASTYSVSPAAYGQ
QPSTAMSLGSMGSVVKSEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDATEPSSLQG
SRLHSVHQHYQSAGTAVNGTVPLTHI
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcattcatggtgtggtcccgcgggcagcggcggaagatggcccaggagaacccc
aagatgcacaactcggagatcagcaagcgcctcggcgccgactggaagctgctgagcgac
gccgagaagcggcccttcatcgacgaggccaagcggctgcgggccgtgcacatgaaggag
tatccggattacaaataccggccccggaggaagaccaagaccttgctgaagaaggacaaa
tactcgctgcccggcaatctgctggccccgggggggggcagcgcggtgagcagccccgtc
ggggtggggcagaggattgacacttacgcgcacatgaacggctggaccaacggcgcttac
tcgctgatgcaggagcagctgggctacagccagcaccacccgggcatgaacagcccgcag
ctgcagcagatgcaccgctacgacatgacgggcctgcagtacagccccatgatgtccacg
gcccagagctacatgaacgccgcctccacctacagcgtgtcccccgccgcctacggccag
cagccctccacggccatgagcctgggctccatgggctccgtggtgaaatccgagcccagc
tcgccgcccccggccatcgcttcccactcgcagagggcctgcctgggagacctgcgggat
atgatcagcatgtacctgccccccggcggggatgccacagagccttcctccctgcagggc
agcaggttacacagcgtccaccagcactaccagagtgccgggactgccgtcaatggtacc
gtaccactaactcacatataa
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