Cyanistes caeruleus (blue tit): 111929501
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Entry
111929501 CDS
T05602
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111929501 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111929501 (CNOT6L)
Enzymes [BR:
ccae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
111929501 (CNOT6L)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111929501 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111929501 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
111929501
NCBI-ProteinID:
XP_023782884
UniProt:
A0A8C0VK15
LinkDB
All DBs
Position
4
AA seq
549 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NNLTRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ
YFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTDKFTLVQKHTVEFNQV
AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGASMKSLHVDKQLLIVANAHMHWDPE
YSDVKLIQTMMFVSELKNILEKASSRPSSPTADPNSIPLVLCADLNSLPDSGVVEYLSNG
IVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFKG
VIDYIFYSNTHMNVLGVLGPLDPQWLVDNNITGCPHPHIPSDHFSLLTQLELHPPLLPLV
NGVHLPSRR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatcctcgcagaatttacaccatcatgtcagcg
gaagaggtggccaacgggaagaagtcgcactgggctgaattagagatctcggggagagtg
cggagcttaagtacgtcgctgtggtcgctgacacacctgactgctctgcacctcaatgac
aacaaccttactcgcattccacctgatattgccaagcttcacaatctggtttacctggat
ctgtcatccaacaaactcagaagtttaccagcagaactaggaaacatggtgtctctcagg
gaattgcttttaaataacaatctgttacgggttttgccttatgaacttggacggctcttc
cagctgcaaaccctgggtttgaaaggcaatcctttatcccaagatattctcagcctctac
caggatccagacggaacccgaaagctactgaactacatgcttgacaatctagcagttcat
ccagagcagctgcctccaaggccatggattactttgaaagaacgagaccaaattctgccc
tcagcttcatttacagttatgtgttacaatgtgttgtgtgataaatacgccacccggcag
ctctatggctactgcccatcctgggcactcaattgggagtacaggaaaaagggaatcatg
gaagaaatcgtcaactgtgatgcagatatcattagtcttcaggaagtggaaacggagcaa
tacttcacccttttcctgccagccttgaaagaacggggatacgacggattcttttctcca
aagtcacgtgccaaaatcatgtccgagcaggagaaaaagcacgtggacggctgcgcgata
ttcttcaaaacggacaagttcacgctggtgcagaagcacacggtggagttcaaccaggtg
gccatggccaactcggagggctcggaagccatgctgaacagagtgatgaccaaggacaac
atcggagtggccgtggtgttggaggtgcacaaggagttgttcggagcaagtatgaaatcg
cttcatgtggacaagcagctgctcatcgtggccaatgcccacatgcactgggaccccgaa
tactcagatgtgaaactcatccagaccatgatgttcgtctcagagctgaaaaacatcctg
gagaaagcctcaagcaggcccagtagcccgacagcagatcccaactctatccctctggtg
ctgtgtgcggatctcaactcgctgcctgattcaggtgtagtggagtacctgagcaacggc
atagtggctgacaaccacaaggacttcaaggagctgcgctacaacgagtgtctgatgaac
ttcagcggcaacgggaagaacggagcctcggagggcaggatcacgcacggcttccagctc
aagagcgcctacgagaacaacctgatgccttacaccaattacacttttgacttcaaaggt
gtgattgactacattttctactccaacacccacatgaacgtgctgggagtcctggggcct
ttggaccctcagtggctggtggacaacaacatcacgggctgccctcacccgcacatcccc
tccgaccacttctcgctgctgacgcagctggagctgcacccgccgctgctgccgctggtg
aacggcgtgcacctgccctcccgcaggtag
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