Cyanistes caeruleus (blue tit): 111929532 Help Entry 111929532         CDS       T05602                                  Symbol HIF1A Name (RefSeq) hypoxia-inducible factor 1-alpha   KO K08268   hypoxia-inducible factor 1 alpha Organism ccae  Cyanistes caeruleus (blue tit) Pathway ccae04137   Mitophagy - animal ccae04140   Autophagy - animal ccae04148   Efferocytosis Brite KEGG Orthology (KO) [BR:ccae00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     111929532 (HIF1A)    04137 Mitophagy - animal     111929532 (HIF1A)    04148 Efferocytosis     111929532 (HIF1A)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:ccae03000]     111929532 (HIF1A) Transcription factors [BR:ccae03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     111929532 (HIF1A) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  bHLH_HIF1A PAS_3 PAS_11 HIF-1a_CTAD PAS HIF-1 PAS_9 PAS_4 HLH Motif Other DBs NCBI-GeneID:  111929532 NCBI-ProteinID:  XP_023782914 LinkDB All DBs Position 5 AA seq 821 aa AA seqDB search MGSACPCIQGSSEQVKRSKCYSVISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHT VSAHLDKASIMRLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDM IYMSENVNKCMGLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFL RMKCTLTSRGRTVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPH PSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTK THHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKD LIFSLGQTECMLKPVESPDMKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTII SLDFSSNESDEQQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALN REVVSKLEPNTEPLELSFTIPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMASEF KLELVEKLFAIDTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSSP SAGSITIFQQSQAAAGSAEEMKPAERADDVKTIIVPSSPVRGAAESSSAPASPYGGSRSR TASPIRAGKGTADQVEKPSPGAPSLLTVTLNKRSTALDEELNPKMLALHNAQRKRKMEHD GSLFQAVGIGSLFQQTGDRGGNASLAWKRVKGCKTNGHSGVEQKTIILLSTDIASKLLGQ SMDESGLPQLTSYDCEVNAPIQGNRNLLQGEELLRALDQVN NT seq 2466 nt NT seq  +upstreamnt  +downstreamnt atgggttctgcctgcccttgtatccaagggtcatctgagcaggttaaacgcagtaagtgt tacagcgtgattagctctgaacgcaggaaagagaagtcgagggatgcagcccggtgcagg aggagcaaggagtcagaagtgttctatgagctggctcaccagctgcccctgccccacacc gtgagcgcacacctggacaaggcgtccatcatgaggctgaccatcagctacctgcgcatg aggaagctgctggatgctggtgagctggagacagaagccaaaatggagaaggaactgaac tgtttctacttgaaagctcttgatggctttgtcatggttctgtctgaagatggggacatg atttacatgtctgaaaacgtgaacaagtgtatgggactcactcagttcgagttgacgggg cacagtgtctttgatttcactcatccgtgtgatcatgaggagctgagagaaatgcttaca cacagaaatggtcctgtgaaaaagggcaaagagcaaaacacggagcgcagcttttttctc agaatgaagtgtacactgactagcaggggaagaacagtgaatataaagtctgctacatgg aaggtgctgcactgcactggccacatccgtgtgtacgacacgtgtgggaaccagactcac tgcggatacaaaaagcctcccatgacctgcctggtgttgatctgtgaacctattcctcac ccatcaaacattgaggttcccctggacagtaaaacgttcctcagtcgtcacagtcttgat atgaaattttcttattgtgatgaaagaattacagagttgatggggtacgagccagaggag ctcctgggtcgctcaatctatgagtactatcacgcactggattctgatcatctgaccaaa acacaccacgacatgttcacaaaagggcaggtgacaacaggacagtacagaatgctggcc aaacaaggtggctatgtctgggttgaaactcaagcaactgttatatacaacactaagaat tctcagccacagtgcatagtgtgtgtgaactatgtgttgagtggaattgttcagaaggac ttaattttttcccttggacaaactgagtgtatgctgaaaccagtggagtctcctgacatg aaaatgaccaaaatattcagtaaagatgacctggatgataccaacagcttatttgaaaaa cttaaacaggaaccagatgctttaactgtgctggcccctgctgctggagacacaattatc tctctagatttcagcagtaatgagtctgatgaacaacaatgtgatgaagttcctttgtat aacgatgtaatgctcccctcatccagtgagaaattgcagaatataaatatggcaatgtcc ccactacctgcctctgaaactacaaagccacttcgtagcaatgctgatcctgcactcaat agagaagttgtatcaaagctggagccaaacacagagccactcgaactttcttttaccata cctcaggtgcaagagcaaccaaccagcccttctgatgcaagtaccagccaaagttcacct gagcccagtagtcccaacgactactgctttgatgtggataatgatatggccagcgaattc aaactggaattagtggagaaactctttgccatagatacagaagcaaaaaatccattttct actcaggaaaccgatttagatttagagatgctggctccttacatcccgatggatgacgac ttccagctgcgctccttcgatcagctgtccccgctggaaagcagctcttccagctctccg agtgcaggcagcatcaccatattccagcagagtcaggcagcggcgggcagcgctgaggag atgaagccggcggagcgcgcggacgatgtgaagacgataattgtcccttcctcgcccgtg cgcggggccgccgagtccagcagtgcccccgcctcgccctacggcgggagcaggagtcga actgcctctcccatcagggcagggaaaggaacagcggatcaggtggaaaaaccttcccca ggagcacccagcttgctaacggtcactctgaataaaagatctactgcactggatgaagaa ctaaatccaaagatgctagctttgcataatgctcagagaaaacgaaaaatggaacatgat ggttcactttttcaggcagttggaattgggtctttattccagcagacaggtgaccgtgga ggaaatgcatcacttgcttggaaacgtgtaaagggatgcaaaacaaatggtcacagtgga gtggagcaaaagacaatcattctactatcaactgacatagcgagtaaacttctagggcag tcgatggatgagagtggactcccccaactcacgagttacgactgtgaagtaaacgctccc atacaaggcaacagaaacctgctacagggggaagaactgctcagagctctggatcaagtt aactga

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