Cyanistes caeruleus (blue tit): 111929550 Help Entry 111929550         CDS       T05602                                  Name (RefSeq) endoribonuclease Dicer-like   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism ccae  Cyanistes caeruleus (blue tit) Brite KEGG Orthology (KO) [BR:ccae00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:ccae03036]     111929550 Chromosome and associated proteins [BR:ccae03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     111929550    microRNA pathway     RISC loading complex      111929550 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Dicer_platform Dicer_dsRBD Ribonuclease_3 Dicer_PBD Ribonucleas_3_3 Dicer_dimer PAZ Helicase_C Cas3-like_C_2 Amidoligase_2 DSRM_2 dsrm Motif Other DBs NCBI-GeneID:  111929550 NCBI-ProteinID:  XP_023782935 LinkDB All DBs Position 5 AA seq 1784 aa AA seqDB search MCCGGVAQVDGGAFVHSARGSRERWCPAARGSEPAVNSESCVALKAGEDSAARRICEDYP SCPRILGLTASILNGKCDPAELEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDC GPYTDKSGLYGRLLMELDEALAFLNDCNISVHSKERDSTLISKQILSDCRAVLVVLGPWC ADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVTPKV IKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNFPSP FTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEVE FRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPI SNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDANETETEPIVDDDDVFPPYVLR PDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDHTFYSTLYLPINSPLRA SIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVP GRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPED TTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQMLELITRLHQYIFSHI LRLEKPALEFKPTEADSAYCVLPLNVVDDSSTLDIDFKFMEDIEKSEARTGIPNTQYTKE MPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYN LDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPEL CAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATDAGVGVKSLPADFRYPNLDFG WKKSIDSKSFISLPNSSVVENENYCKHSTIVVPENAAHQGANRTSSAENHDQMSVSYRTL LNESPSKLQIDVSVELAAINGVSYNKNLANGNCDLVNKDFCQGNQLNYCRQEIPVQPTTS YPIQNLYNSENQPKPSNECTLPSNKYLDGNANKSTSDGCPIVAVTTSTSKAINLSKDRAD SEKNPCSGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYP DAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYIVNQDKSNTDK WEKDEMTKENMLANGKLDDYNDDEENEDLMWRLPKEEADFEDDFLEYDQEHIKFIDNMLM GSGAFVKKISLSHFSTTDSNYEWKAPKKSSMGNVQCSSDFDDFDYSSWDAMCYLDPSKAV EEDDFVVGFWNPSEENCGVDAGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERA AQLFLCSLGLKVLPVIKKTDWEGTPCATTENCNSEQKNHSPNSVSASVANSEPSLCKDLE YGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTIT DCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYF KAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGA IYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKV RVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS NT seq 5355 nt NT seq  +upstreamnt  +downstreamnt atgtgttgcggaggtgttgcacaggtagacggcggcgcgtttgttcactctgcgagaggg agcagggagcgctggtgcccggccgcccggggctcagagccggccgtcaacagcgaaagc tgtgtcgcactgaaggccggcgaggacagcgctgccaggcggatctgtgaggattatcca tcatgtcctcgaattttgggattaacagcttccattttaaatgggaaatgtgatcctgct gagttagaggagaagatccagaaactggagaaaattttgaagagcaatgctgaaactgca actgatttggtggtcttagacagatatacttctcagccatgtgagattgttgtagactgt ggaccatatactgacaaaagtgggttgtatggaagattattaatggaattggatgaagca cttgcttttctaaatgactgcaacatatctgtacattcaaaagaaagagattctacctta atttctaagcagatattgtcagactgtcgagctgtgttggttgttctgggaccgtggtgt gcagataaggtagctgggatgatggtgagagagctgcagaagtatatcaaacatgaacaa gaggagctgcacaggaaatttttattgtttacagacactttcctaaggaaaatacatgca ctctgtgaagagcacttctcgcctgcctcacttgacctgaaatttgtgaccccaaaagta ataaagctgcttgaaatcttgcgcaaatacaaaccatatgaacggcagcagtttgaaagt gttgaatggtataacaataggaatcaggataattacgtatcttggagtgattctgaagat gatgatgaggatgaagaaattgaggagaaagagaagccagagactaatttcccatctccc tttactaatattttatgtggaattatttttgtggaaagaagatacacagcagttgttcta aataggttgataaaagaagctggcaagcaagatccagaactggcttacatcagtagcaat tttataactggacatggcattggcaagaaccagcctcgtagcaagcagatggaagtagaa tttagaaaacaggaagaggttcttagaaaatttcgagcacacgagaccaacctacttatt gctacaagtattgtagaagagggtgttgacataccaaaatgcaacttggtggtgcgtttt gatttgcccacagaataccgttcctatgtgcagtcaaaaggaagagctagagcaccaatt tccaattacattatgttagcagatacagacaaaatcaaaagttttgaagaagatcttaag acatacaaagccattgagaagatcctccgaaacaaatgctcaaaatctgttgatgccaat gaaactgaaactgaacccattgttgatgatgatgatgtctttccaccctatgtattgagg ccagatgagaacagtccaagggttactattaacactgctattggacacataaataggtac tgcgctagattaccaagtgatccatttacacacctggctcccaagtgtaagacccgggaa ctgcctgaccatacgttttactctactctctacctgccaatcaactcacctcttcgagct tcaattgttggccctccaatgagttgtgcaagactggctgagagagttgttgctcttatt tgctgtgaaaaactgcacaaaattggtgagctggatgatcatttgatgccagttggtaaa gaaacggttaaatatgaggaggaacttgatttacatgatgaagaagaaaccagtgttcca ggaaggccaggctctaccaaacgaagacagtgctatcctaaagctattccagagtgtttg agggatagttatcccaaacctgatcagccctgttacttgtatgtaataggaatggtgtta acgactcctctacctgatgagctcaacttcaggagacgaaagctgtatcctcccgaggat acaacaagatgttttggcatattgacagccaaacctatacctcaaattcctcactttcct gtgtatactcgctctggagaggttacaatatccattgagcttaagaaatctggttttact ctgtctctgcaaatgcttgagctgattacacgactccaccagtacattttttcacatatt cttcgtcttgagaaacctgcactagagttcaaacctacagaagctgattcagcctattgt gttctacctctaaatgttgttgatgactccagcactttggacattgactttaagtttatg gaagacattgagaaatctgaggcacgtacaggcattcccaatacacagtatacaaaagaa atgccttttattttcaagttagaagattaccaggatgccgttatcattccacgataccga aattttgatcagcctcatcgattctacgtagctgatgtatacactgatcttactccactc agtaaattcccttcccctgaatatgaaacttttgctgagtattataaaacaaagtataat cttgaccttactaatcttaaccagccactgctggatgtggaccacacatcttcaagactt aatcttttgactcctcgccatttgaatcagaagggaaaagcacttccactgagcagtgct gagaagaggaaagcaaaatgggaaagtttgcagaataaacagatactggttcctgagctc tgtgctatacatcctattccagcatcattgtggagaaaagcagtttgcctccccagcata ctttaccgcctacactgccttttgacagcagaggaactgagagctcaaacagccactgat gctggtgtaggggttaaatcacttcctgcagatttcagatatcctaacttggactttgga tggaaaaagtctattgacagcaagtccttcatctctcttcctaactcctctgtagtagag aatgaaaattactgtaagcacagcacaattgtagtccctgaaaatgctgcacatcaaggt gctaatagaacctcttctgcagaaaaccatgaccaaatgtctgtgagttacagaacactg ctcaatgagtcacccagtaaactccaaattgatgtctcggtagaacttgcagcaattaat ggtgtttcttataataaaaatcttgccaatggcaattgtgatttagttaacaaagacttt tgccaaggaaatcagctgaattactgcaggcaggaaatacctgtacaaccaactacctca tatcccattcagaatttatacaacagtgagaaccagcccaagcccagcaatgaatgtact ctaccgagtaataaataccttgatggaaatgctaacaaatctacctcagatggatgcccc atagtggcagtgaccaccagtacttcaaaagctattaatctttcaaaagacagagcagat tctgaaaagaacccttgcagtgggtactcctcaaaaactctcggtcctaatcccggtctc attcttcaagctttgactctttcaaatgctagtgatggattcaacctggagcggctagag atgcttggtgattcatttttaaagcatgccatcactacatacttgttttgcacttaccct gatgctcacgagggacggctgtcatacatgagaagcaaaaaagtcagcaactgtaacttg tatcgccttggaaaaaagaaaggactgccaagtcgcatggtggtgtcgatttttgatccc ccagtcaattggcttcctcctggttacatagtaaatcaggacaagagcaacactgacaaa tgggagaaagatgaaatgacaaaggaaaacatgttggctaatggtaaacttgatgattat aatgatgatgaagagaatgaagatctaatgtggaggttgcccaaggaggaagcagacttt gaagatgattttctggagtatgatcaggagcatatcaaattcatcgataatatgttaatg ggatcaggggcttttgtgaagaaaatttcactctcacacttttcaaccactgattcaaac tatgaatggaaagcacccaaaaagtcatccatgggtaatgttcagtgttcatcagatttt gatgattttgactatagctcttgggatgctatgtgctatctggatcctagcaaggctgtt gaagaggatgattttgtagtgggcttctggaatccatcagaggaaaactgcggtgttgat gcaggaaaacagtcgatctcctatgacttgcatacagagcagtgtattgctgacaagagc attgcagactgtgtggaagccctgttgggctgctatctgaccagctgtggtgaacgagct gctcagcttttcctgtgttccttggggctgaaggtgctccctgtaattaaaaagactgat tgggaaggcactccgtgtgctaccacagagaactgtaacagtgagcagaaaaatcattca cccaattctgtttctgcttctgtagctaattcagagccttctctgtgtaaagacctggag tatggctgtttgaagattccaccaaggtgtatgtttgatcacccagatgctgaaaaaacc ctaaatcaccttatttctggttttgaaaactttgagaagaaaataaattacagttttaag aacaaggcttatcttcttcaggcatttactcatgcctcttaccattataataccattact gattgttaccagcgcttagaattcctgggagatgcaattttggactacctcataaccaag cacctttatgaagacccacggcaacactctccaggagttcttactgacctacgatctgct ctagtcaataataccatttttgcatcattagctgtaaagtatgactaccacaagtacttc aaagctgtctctcctgaactgtttcatgttattgatgactttgtgcagtttcaaatggaa aagaatgaaatgcaaggaatggattctgagctcagaagatctgaagaagatgaagaaaaa gaggaagacattgaagtaccaaaggccatgggggatatatttgagtcccttgctggtgcc atttatatggatagtggaatgtctttggaaatggtttggcaagtgtactatccaatgatg aggccactaatagaaaaattttctgcaaatgtgccccgttccccagtgcgagagctgctg gaaatggagccagagacagccaaatttagtcctgcggaaagaacttacgatggaaaggtc agagttacagtggaagttgtaggaaagggaaagtttaaaggtgttggcagaagctacagg attgccaaatctgcagctgcgagaagagcactacgaagcctcaaagcaaatcaacctcag gtcccaaacagctga

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