Cyanistes caeruleus (blue tit): 111929577
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Entry
111929577 CDS
T05602
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03013
Nucleocytoplasmic transport
ccae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111929577 (PNN)
03015 mRNA surveillance pathway
111929577 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111929577 (PNN)
03041 Spliceosome [BR:
ccae03041
]
111929577 (PNN)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111929577 (PNN)
Spliceosome [BR:
ccae03041
]
Complex C
Other components
EJC/TREX
111929577 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
111929577
NCBI-ProteinID:
XP_023782965
LinkDB
All DBs
Position
5
AA seq
690 aa
AA seq
DB search
MLSSLNGTVAGPLGRAGSSAPGAGQAPLTPRTVSFRPPQNRLLALTGPGGGRGRGSLLLR
RGFSDSGGGPPAKQRDLEGASSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATSKE
RTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVAIATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLMDESQKKMNALFESRRNEFAEQINKMEARPRRQSVKEKEHQEVQN
EEKKEEQNKEQEEGKVAQQVEEMETGNQHNDVEMEEVGEEKGKTGSGHSDAEKEQEEDEQ
KHDIEMKVEEPTEVRENDKQQDGQHEEVTVVKEESGNVQPADNEQDVAEMNEADSVEPVE
NENGKEIEPETECDAQPEKVCNVTSPKKEKGIKTENKAELEETQEKTPEGQTESVSEALS
QPQSVPLAQSPQLSQSTQDTEPQTDKDENAVVSVKVVEAQAEQNQTPSAEGKTKTRSRSR
GRAGNKTGHNRSSSSSSSSTSSSTTSASSSSTGSSTSRSSSTSSSTTSGSTSRDSSSSSS
SSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSSRSDR
KRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgctctccagcttgaacggaacggttgcggggccgttgggccgggcgggcagcagcgcc
ccgggggccgggcaggcaccactaacaccgcgtaccgtctctttcaggccccctcaaaac
aggctgttagccctcacaggccccggtggaggtagagggcgtgggagcttattgctaagg
cgtggattctcggatagtggaggaggacccccagccaaacagagggatcttgaaggtgca
tccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagcgacgca
gaggatgatgatatcaaaaagccagcgttgccatcttctgttgttgctacctccaaagag
cgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaaaggaat
cgacgtatatttggcttgttgatgggcactcttcaaaaatttaaacaggagtccacagtt
gctattgctactgagaggcaaaagagacgacaagaaattgaacaaaaacttgaagtgcag
gcagaggaagagagaaagcaagttgaaaatgagaggcgagaactatttgaagaaagacgt
gctaaacagacagagctgcggttattggagcaaaaggttgagcttgctcagttgcaagaa
gaatggaatgaacataacgctaaaataattaaatacataagaacaaagacaaaacctcat
ttattctacatacctggcagaatgtgtcctgctacgcagaagctgatggacgagtcacag
aaaaagatgaatgcactctttgaaagcaggagaaatgaatttgcagagcagattaacaaa
atggaggccagacccagaagacaatctgtgaaggaaaaagagcatcaggaggtgcagaat
gaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcagcaggtg
gaagagatggagacaggtaatcagcacaatgatgtagaaatggaggaggtaggggaggaa
aagggaaaaacaggttcagggcacagcgatgcagaaaaagaacaggaagaggatgagcag
aaacatgacattgagatgaaagtagaagagcctactgaggtgagggagaatgacaagcag
caggatggtcagcatgaggaggttacagttgtaaaagaggaaagtggaaatgttcagcca
gcagataatgagcaggatgtggctgaaatgaatgaggcagatagtgtagaacctgtagaa
aatgaaaatggcaaagaaatagaaccagaaacagagtgtgatgctcagccagaaaaagtg
tgtaatgttacttctcccaagaaggagaaaggtatcaaaacagaaaataaagctgaactt
gaagaaacacaggagaaaacacctgaaggtcagacagaatctgtgtctgaggctctgtct
cagccacagtctgtgccactagcacaatcacctcagttgtctcagtccactcaggataca
gagcctcagacagacaaggatgaaaatgctgtggtgtctgtaaaggtggttgaagcccag
gcagagcagaatcagacgccgagtgcagaaggtaagactaagactaggagtagaagcagg
ggtagggcagggaacaaaactggtcataaccgtagcagcagcagcagtagcagtagcact
tcaagcagtactaccagtgcaagtagttccagtactggcagcagtaccagtcgcagcagt
tccaccagcagcagcactacaagtgggagtacaagcagggacagtagcagcagtagctct
agcagtagcgaaagtagaagtcgaagccgaggcagagggcataacagagatagaaaacgc
agaaggagcacagacaggaagcggagggatgcttcaggagtagacagaagtcacaagtcc
tcaaaaggtggtagtagagataccaaaagctcaaaggataaaagttcgaggtctgacaga
aagagatctatatcagaaagtagtcggtcaggcaagagaacttcacggagtgaaagagac
cgtaaatcagacaggaaagacaaaaggcgttaa
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integrated database retrieval system
