Cyanistes caeruleus (blue tit): 111930104
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Entry
111930104 CDS
T05602
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
111930104 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccae04121
]
111930104 (RAG1)
Enzymes [BR:
ccae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111930104 (RAG1)
Ubiquitin system [BR:
ccae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111930104 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
DUF5981
Motif
Other DBs
NCBI-GeneID:
111930104
NCBI-ProteinID:
XP_023783715
UniProt:
A0A8C0VB84
LinkDB
All DBs
Position
5
AA seq
1036 aa
AA seq
DB search
MSVASQMDLPEELQHTYTKFSEWKFKLFKLPSFEKTPSDDSQLISKDQAEEAVSSNKEFI
LHKDEAVPRGEKMELTSNRQGLEEDAHAMKTQDNRVHQNNLKQLCRICGVSFKTDCYKRT
YPVHGPVDDETLCLLRKKEKTATSWPDLIAKVFKIDVRGDVDTIHPTQFCHNCWSIIHGK
FSNTLCEVYFPRNSAMEWQPHSPNCDVCHTARRGIKRKSQPPSVQRGKRVKTTGERAWLN
RGVKNQAQINNKNLMKDIVNCKDIHLSTKLLSIDYPVDFIKSISCQICDHILADPVETTC
RHLFCRTCILKCIRVMGSYCPSCWYPCFPTDLVTPVKSFLNILDNLTIRCPVKECDEEIL
HGKYGQHLSGHKEMKDRELCSYINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFAEKEE
GGDIKAVCMTLFLLALRAKNEHKQADELEAIMQGRGSGLHPAVCLAIRINTFLSCSQYHK
MYRTVKAVTGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLSGLPL
SIDDYPVDTIAKRFRYDAALVCALKDMEEEILEGMKAKNLDDYLNGPFTVVVKESCDGMG
DVSEKHGSGPAVPEKAVRFSFTVMNISVAHGNESKRIFEEVKPNSELCCKPLCLMLADES
DHETLTAILSPLIAEREAMKNSELLLEMGGILRTFRFIFRGTGYDEKLVREVEGLEASGS
TYICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGVSAKP
FIETVPSIDALHCDIGNATEFYRIFQMEIGELYKNPDVSKEERKRWQLTLDKHLRKKMNL
KPMLKMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPAKECP
ELLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNES
GNKLFRRFRKMNARQSKVYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQSFTIDSGGSLG
DSLPLEVLENNDSSEL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagcatcacaaatggatctacctgaagaacttcagcatacatacacaaaattt
tctgaatggaaattcaagctctttaaattgccatcatttgaaaaaacaccctctgatgac
agccagctcataagcaaagatcaggcagaagaggctgtttcttcaaacaaagaattcatc
ctgcataaagatgaagcagtgccaagaggagaaaagatggaattaacaagcaataggcag
ggacttgaggaagatgcccatgccatgaaaacacaagacaatagagtgcatcagaacaat
ctgaagcaactctgccgcatctgtggagtttcatttaaaactgattgctacaagagaacc
tacccagtgcatgggccagtggatgatgaaactctgtgccttctgagaaagaaagaaaaa
acagcgacctcttggccagatcttattgctaaagttttcaagattgatgtgcgaggggat
gtcgatactattcatcccactcaattttgtcacaactgttggagtattatacatggaaaa
ttcagtaatactctatgtgaagtatattttcctaggaacagcgcaatggagtggcaaccc
cattccccaaactgtgatgtgtgccatactgccagacgaggaatcaagagaaaaagccag
cccccaagtgtacaacgtggtaaacgtgtcaaaaccactggagaacgtgcttggctaaac
agaggtgtaaagaaccaagcacagataaacaacaaaaatttaatgaaagacattgtcaat
tgcaaggatatacatctcagcaccaagctgctttcaattgattacccagtagatttcatt
aaatccatttcttgccagatttgtgatcatattttggcagatccagtggaaacaacgtgc
agacacttgttttgcagaacttgcatccttaaatgtatcagggttatgggcagctattgc
ccctcctgctggtatccttgctttcctaccgatctggtaaccccagtgaaatccttcctg
aacatccttgataacctgactataagatgccctgtaaaggaatgtgatgaagagatcttg
cacggaaaatatggccaacacctctctggtcacaaggagatgaaagacagagagctctgt
agctacatcaataaaggtggtcgaccaaggcagcacctcctgtccttgacgaggagagct
cagaaacatcgtctgagggaactgaaacgtcaagtcaaggcttttgctgagaaagaagag
ggaggtgatataaaggctgtatgcatgactttgttcctgctagctttgagagcaaaaaat
gaacacaaacaagcagatgaactggaggctataatgcaagggaggggatctggacttcat
cccgctgtctgtttggccatccgaatcaacacgtttctcagctgtagtcagtaccataaa
atgtatagaacagtaaaagctgtcaccgggaggcagatcttccagcctttgcatgctctt
cgcactgctgagaaagccctcctaccgggttatcacccatttgagtggaaacctcccctg
aaaaatgtatccactaacacagaagtgggaattatagacggactatcaggactgccactg
tcaattgatgattacccagtagacacaattgcaaagagattccgatatgatgcagccttg
gtttgtgccttaaaggacatggaggaggagatcttggaaggcatgaaagcaaaaaacctg
gatgactatttgaatggccccttcactgtagtagtaaaagagtcctgtgatggaatggga
gacgtcagtgaaaagcatggaagtgggcctgctgtccctgagaaggctgttcgattttct
ttcacagtcatgaacatctctgtagcacatgggaatgaaagcaagaggatctttgaggaa
gtaaagcccaattcagagttgtgctgtaagcccttgtgccttatgctggctgatgaatca
gatcatgaaactctgacagcaattctgagccccctcatagcagaaagagaggctatgaaa
aacagtgagctgctgcttgaaatgggaggcatcctgagaacatttaggttcatctttagg
ggtacaggatatgatgagaaactcgtgcgggaagtggaaggactggaggcctcaggttcc
acttacatttgtaccctgtgtgatgcaacccgcttggaggcatcccagaatctggtcttc
cactccataaccaggagccatgctgaaaatctggagcgatatgaaatatggaggtccaac
ccatatcacgagtctgttgatgagctccgtgacagagtgaagggtgtttcagccaaacct
tttattgagactgttccctccatagatgcattgcactgcgacattggcaatgcaacagaa
ttctacaggattttccagatggagattggtgaactttacaagaatcctgatgtgtctaaa
gaggagaggaagaggtggcagttgactcttgacaaacacctcaggaagaagatgaacctg
aagcctatgttgaagatgagtggaaattttgctagaaagcttatgtccaaagagactgta
gaggcagtatgtgaattaataaagtgtgaggaaaggcatgaagccctaaaagaactaatg
gacctttatctgaagatgaagccagtgtggcggtcctcatgccctgccaaggagtgccca
gaactgctgtgccagtacagctacaattcacagcgttttgcagaactcttatctacaaag
ttcaagtacaggtatgagggcaagattacaaattacttccacaaaacacttgctcatgtt
cctgaaatcattgaaagagatgggtccattggggcctgggcaagtgaaggaaatgagtct
ggaaacaaactttttaggaggttccgaaaaatgaatgccaggcagtccaaagtctatgag
atggaggatgtcttgaagcaccactggctatatacctccaagtacctccagaagttcatg
aatgcccataaaacattaaaaagccagagcttcaccattgattcagggggtagtttaggt
gactccttgccactggaggtcttggaaaacaatgattcatcagaactctga
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