Cyanistes caeruleus (blue tit): 111930131
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Entry
111930131 CDS
T05602
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111930131
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccae04515
]
111930131
Cell adhesion molecules [BR:
ccae04515
]
Immunoglobulin superfamily
NGL family
111930131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
ig
Ig_3
LRR_1
LRR_14
V-set
LRR_9
Ig_2
LRR_LRWD1
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
111930131
NCBI-ProteinID:
XP_023783748
LinkDB
All DBs
Position
5
AA seq
638 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPA
DLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFTKVTVQDT
GLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQVGPTPVT
NWETINMTTSLTPQSTRSTEKTFTIPVTDTNNGIPGIDEVMKTTKIIIGCFVAITLMAAV
MLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYK
SPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtagtgctgttggctcttcagcttcttgtggtggctggt
ttagtgagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagtaaagtg
atctgtgtacggaaaaaccttagagacgtgccagacggcatctccaccaacacccggcta
ctcaatctccatgagaaccagatccaaatcattaaagttaatagcttcaagcatctgagg
cacctagaaatcctgcagctcagcaggaatcacatcagaacaattgaaataggggctttc
aatggtctggccaatctcaacactttggaactctttgacaatcgtctgaccactatccca
aatggggcttttgtatacctgtcaaaactgaaggaactgtggttgagaaacaaccccatt
gagagcatcccttcttatgcttttaacagaatcccttctctccggaggttggatctgggg
gagttgaaaaggctttcgtacatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaaccttgccatgtgcaatcttcgagagattcctaaccttactccgcttgtaaaa
ctggatgagttagatctttctgggaatcacctgactgccatccggccaggttctttccaa
gggttaatgcatcttcagaaattgtggatgatacagtcccagattcaagtgatagaaagg
aatgcttttgataaccttcagtcgcttgtagagatcaacctggcacacaacaatctaaca
cttctgcctcatgacctgttcacaccactccgcctagaaaggatccacttgcatcacaat
ccttggaactgcaactgtgatatcctttggctcagctggtggattaaagacaaggcaccc
tcgaatactgcatgctgtgcacgttgccacacgcctcccagtttaaaaggaaggtacatt
ggtgagctggacctgaattacttcacatgttatgctccagtcatagtggagccaccagca
gacctcaacgtcacggaaggcatggctgcagagatgaaatgccgggcatcgacctccctg
acctccgtatcttggattactccaaatggatctgtaatgacgcatggggcatacagagtt
cggattgctgtgctcagcgatggcacattaaattttacaaaggtaactgtgcaagacacg
ggtttgtacacgtgcatggtgagtaactctgtcgggaataccacggcttctgccacgctg
aatgtgaccgccctggataaccctggttacacgtacttttcaaccgtcacggtagagact
gtggaaccttctcaggatgaggcacagaccacagagcaggttgggcccacaccagttacc
aactgggaaaccattaacatgacaacctcactcactccacagagcacaagatcaacagaa
aaaacattcaccattcctgtgacggacacaaacaacgggatcccaggaatagatgaggtt
atgaagactaccaaaatcataattggttgttttgtggctatcactcttatggctgctgtg
atgctggtaattttctacaaaatgaggaaacagcatcaccggcagaaccatcatgctcca
acacggactgtagagatcattaatgtggatgatgagcttacaggtgacacacccatagag
agtcatttgcccatgccagcaatagagcatgagcacttaaatcactataactcttataaa
tctcctttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcat
gaaccgttattgatccgaatgaactcgaaagacaatgttcaagagactcaaatctaa
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