Cyanistes caeruleus (blue tit): 111930172
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Entry
111930172 CDS
T05602
Symbol
DDB2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03420
Nucleotide excision repair
ccae04115
p53 signaling pathway
ccae04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111930172 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
111930172 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccae04121
]
111930172 (DDB2)
03400 DNA repair and recombination proteins [BR:
ccae03400
]
111930172 (DDB2)
Ubiquitin system [BR:
ccae04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111930172 (DDB2)
DNA repair and recombination proteins [BR:
ccae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
111930172 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
111930172
NCBI-ProteinID:
XP_023783842
LinkDB
All DBs
Position
5
AA seq
513 aa
AA seq
DB search
MAPVNQPKDKKRERACQHWPEEAKSAGKRKRDYGERGNEKQEKKSVRKTFKALGKRGCCG
DGFVMRNKRVLSSQLERRCSIVHYVYQKMLGGSFQAQLRQRLELAFLRSLSSYCLFRRAS
PFDRRVTCLEWHPTHPSTLAVGSKGGDIILWDCEVLAKTCFIKGKGPGDSLGDIKFSPYE
AEKLYVASGDGTLSLQDLEGRAVQVISHALDCGHEHHNVCCWYCSVDVSASCRAVVTGDN
VGNVVLLSTSGEEIWKLKLHKKKVTHVEFNSRCEWMFATASVDQTVKIWDLRNIKNKTNF
LHLLPHEKPVNAAYFSPTHGAKLLSTDQHNEIRVYSSSDWTKPQHLIPHPHRQFQHLTPI
KATWHPRYDLIVVGRYPDPKFPGYTLNELRTVDVFDGNTGEMVCQLYDPNASGIISLNKF
NPMGDTLASGMGFNILIWNQEEMAVKKHEHLLKAMRNEEIEMTEQGIGSWSSSRRGGQRQ
ANPGTSKLKANLMSGELEEMKMKSSDSKLQGRK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccagccaaaggacaagaagcgtgagagagcatgtcagcattggcca
gaagaggcaaaatcagctgggaagaggaaacgggactatggagaacgagggaatgagaaa
caagaaaagaagtctgtgagaaaaacatttaaagccttagggaaaagaggttgctgtgga
gatggatttgtgatgagaaacaagagagtcctttcctctcagctggagcggcgatgcagc
attgttcattatgtctaccagaaaatgctgggaggctcctttcaggcacagctcaggcag
agattggagctggcttttctgcgttctctttcctcatactgtctcttccgaagagcaagt
ccctttgacaggagagtgacatgtctggaatggcacccaacacaccccagtacgctagct
gttggttccaaaggtggagacatcatcctttgggactgtgaagtgcttgctaaaacctgc
ttcataaaggggaaagggccaggagattctcttggagacatcaagttcagtccttatgag
gcagagaagctttatgtggcatcaggtgatggcaccctaagtctgcaggatcttgagggc
agagcggtgcaggtgatctctcatgccctggactgtggccatgagcatcataatgtttgt
tgctggtactgcagtgtggatgtttctgcaagttgccgtgctgtggtgacaggtgataat
gtgggcaacgtggtcctgctcagcacttccggtgaagagatctggaagctgaaattgcac
aagaagaaagtgactcatgtagagtttaactcccgatgtgagtggatgtttgccacagca
tctgtggatcagacagtcaaaatctgggacctcagaaacatcaaaaacaaaacgaacttt
cttcatctgcttccacatgagaaaccggtcaatgcagcttacttcagcccaacacatggt
gccaagcttctgagcacagaccagcacaatgaaatcagggtttattcatcttcagactgg
accaagccacagcatctgattccacatccacataggcagtttcagcacctcacacctatt
aaggcaacgtggcatcctcgctatgacctcattgtggtaggtcgctaccccgaccccaag
ttccctgggtacacgctgaacgagctgcgaactgtggatgtgtttgatggaaacaccggc
gagatggtttgtcagctctacgatccaaatgcttctgggatcatctcgctcaataagttt
aaccctatgggagacacactggcttctggcatgggctttaatattctgatttggaaccag
gaggagatggcagtcaagaagcatgaacatcttttgaaagccatgagaaacgaggagatt
gaaatgacagaacaggggattggaagctggagttcatccagacgtggagggcagaggcag
gcaaaccctggcacaagcaaactcaaagctaacttaatgtctggggagctagaggagatg
aaaatgaaaagcagtgattctaaactgcagggaaggaagtga
DBGET
integrated database retrieval system
