Cyanistes caeruleus (blue tit): 111930200
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Entry
111930200 CDS
T05602
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04140
Autophagy - animal
ccae04148
Efferocytosis
ccae05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111930200 (VPS18)
04148 Efferocytosis
111930200 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111930200 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccae04131
]
111930200 (VPS18)
Membrane trafficking [BR:
ccae04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111930200 (VPS18)
Hops complex
111930200 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-RING_UBOX
zf-ANAPC11
zf_RING_Vps8
zf-RING_2
Nup54_57_C
DUF2229
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
111930200
NCBI-ProteinID:
XP_023783918
LinkDB
All DBs
Position
5
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLHRSVSVQHSRASVGIPHSGYVNARLEKETPIFNKQRIDFTPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTSQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAVHADHLPSFREFPANLGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPPDIDITVNKPISIVLTQFHFLLLLSDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGILQGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKSHHRPKDTDTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcctggacgagtacgaggactccctgcaccgttccgtctccgtgcagcac
agccgcgccagcgtgggcatcccgcactccggatatgtcaatgcacgactggagaaggaa
acgccaatatttaacaagcagaggattgattttactcctccagagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttgggaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccagtgaa
tgcctttacctgaacagaagtgttcagaaagtgcgggcgctctcccgctggaaaggacac
ttgattgaaagtgtgggctggaacaaatttctgggttcagaaaccaacacagggcctatc
ctggtggggacatcccaggggcagatctatgaagctgaaatctctgtcagcgaaggaagc
ctcttcagcactaaccctgaccagtacttccgacaggtctacactctggaggaggaatct
ggacctgccccagtctgctgcttggaaattgaacgagggatagaagggaaattttttatt
atagccaccactaggaagagactctttcagtttgttggcaaagtgcctgaagggacagag
cagcagggcttcagctccatatttgctgtgcatgctgaccatctgcccagttttcgggag
tttccagccaacttgggcttcagtgagatagccttttacactccaaaactgcgttccaac
ccacgctcctttgcctggatgatgggaaatggtgttttatatggtacactggattatagt
cgtcctgattcgattctgagtgatgaacgggtctgggtttatcctcctgatattgacata
actgtaaacaagccaatttccattgtacttacccagttccacttcctgttgctgctgtct
gaccgagtgaaggctgtctgcactctgaatggacaggttgtttttcaggatctgttcctg
gagaagtttggcttgctgacacgcatgattaaagatcccacagtccagcagatatggatc
cacactgagaaggtagtcttccgctatcatgtccaacgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagcaaaagagtattgtaaggaccgtccagag
tgtcttgacatagtgttggccaaagaggcagagcactgcttccaaaacaaaaggtatctg
gacagtgccaaatgttacgcactgacccagaactactttgaggaaattgctctgaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaagctgagtaaccta
aagccttcagagaagacacagaccactctgctgaccacgtggttgacagaactgtacctg
aactggctgggtatattgcaaggagatccctcacagcgaaatctctatttggatacacgg
gagaagttccgcactttcctgagcagtcctaaaaacaaagactgtctttttaataaccgg
gcatcaatttatgagctgttggcgagccatggcgacacagagcacatggtctactttgca
gtcatcatgcaggattatgagcgtgtagtagctcaccactgccagcatgacgagtacgat
gaggctctgaacgtgttgtccaggcacagagatgagaagctcttctacaagttctctccg
gttctcatccaacatatccccaagaaggtagttgacgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgtaaactacagccagagtgccagcacccag
cagatcaatgaagccattagatatatggagttctgtgtctaccagttggaggaaacccag
caagccattcacaactacctgttgtctctttatgctttgtgtcggccggactcgctgctg
tcatacctggagcaagcaggaaccaacccaaacagaatccactatgacctgaagtatgca
ctgcgcctgtgtgcagagcatgggcaccaccgtgcatgtgtccacatttacaaagtgatg
gaattatatgaggaggctgtggatcttgccttacaggtagatgttgatcttgccaagtcc
tgtgcagatcttcctgaagatgatgaggaactccggaagaagctgtggttgaagatcgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctccagctgt
gctctgctgaagattgaagatgtgctgccattctttccagactttgtaactattgaccat
ttcaaggaggcaatctgtaactccttggaggattacaacaagcacattgaggaactgaaa
agggagatggaggaagccacacaaagtgccaagaggatccgagaggacatccaggaaatg
agaaataagtatggctctgtggagcctcaggaaaaatgtgcagcttgtgactttccactt
ctaaatcgccctttttaccttttcctgtgtggtcacatgttccactatgactgtctcctg
caagcagttttcccaaaccttcctgcctacaagcaggcaaaacttgaagatcttcagaag
aagctggcagctaccagccagccatccaagagccaccatcgtcccaaggacacagacacc
attagcttggggaaggggcagcagagccgggaacagatcaaagctgacattgatgatatt
gtggcagctgaatgtgtgtactgtggtgagctgatgatccgctccattgacaagcctttt
attgatccccaaaagtatgaagaggagatgcaaagctggctgtag
DBGET
integrated database retrieval system
