Cyanistes caeruleus (blue tit): 111930231 Help Entry 111930231         CDS       T05602                                  Symbol VPS39 Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism ccae  Cyanistes caeruleus (blue tit) Pathway ccae04140   Autophagy - animal ccae04142   Lysosome biogenesis ccae04148   Efferocytosis ccae05132   Salmonella infection Brite KEGG Orthology (KO) [BR:ccae00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome biogenesis     111930231 (VPS39)    04140 Autophagy - animal     111930231 (VPS39)    04148 Efferocytosis     111930231 (VPS39)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     111930231 (VPS39)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccae04131]     111930231 (VPS39) Membrane trafficking [BR:ccae04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     111930231 (VPS39) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin VPS18_solenoid_2nd LIF1_N SAM_CEP-1_C DUF4145 EcoR124_C Motif Other DBs NCBI-GeneID:  111930231 NCBI-ProteinID:  XP_023783960 UniProt:  A0A8C0Z937 LinkDB All DBs Position 5 AA seq 840 aa AA seqDB search MPGEVMSSESVCCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQ QITTISKAKGASLFTCDLQQSDTGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDV PKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLT VVLNEEGVCTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRF ITSGGTNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIH HIKNLFAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSG AELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLK CYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQS KKANSPLKGHERTVQYLQHLGTENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRD KVLSFLIENFKSLTIPYLEHIIHVWEETGADFHNCLIQLYCEKVQGLMKEYLSSFPADKA PVPAGEEGGDLGDYRKKLLLFLEKSSWYEPSRLISDFPFDGLLEERALLLGRMGKHEQAL FIYVHILKDTSMAENYCHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQA NLQAALQVLELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLH AEFLRVQEERILHQQVKCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT NT seq 2523 nt NT seq  +upstreamnt  +downstreamnt atgccaggagaggttatgtcatcagaaagtgtctgttgcaataggtttgaagtgacacta gagaaatcaaataagaacttctcaaagaagattcaacagattcatgttgtttctcaattt aagattttggtcagtctattagaaaataacatttatgtccatgacctgttgacatttcaa caaatcaccacaatttcaaaggcaaaaggtgcatctctcttcacttgtgatctccagcaa tcagatacaggggaagaggtgctgaggatgtgtgtggcagtgcgtaagaagctacagctt tatttctggaaggacagagagttccacgagctgcagggagacttcagcgtacctgatgta cccaaatctatggcctggtgtgaaaactccatctgtgtaggcttcaagagggactattac ctgatacgggtggatggaaaaggatccatcaaagaactgtttcccacagggaagcagctg gaaccattggtagctcctgtagcagatggaaaagttgcagttggccaagatgatctaaca gttgtgcttaatgaagaaggggtctgtactcagaagtgtgccttgaactggacagatatt cctatagccatggaacaccagcctccctacatcattgctgttctgccaaggtacgtggag atccgcacttttgaaccccggctgctggtgcagagcatcgagctgcagaggccacgcttc atcacctctggaggcacaaacatcatatatgtggcaagtaatcattttgtttggaggctt attccggtgtccatagccacacagatccagcagcttctgcaggacaaacagtttgagttg gctttgcagttggcagaaatgaaagatgattcagatagtgagaagcgacaacaaattcac cacataaagaatctctttgccttcaaccttttctgccagaagcgttttgatgaatccatg caagtttttgccaagcttggtacagatcccactcatgtgatgggtctgtatccggacctc ctgcccacagattacaggaaacagctacaatatcccaaccccctcccagggctctctggg gcagagctggagaaggcacatttagctctgatagactacctaactcaaaaaaggagtcag ctagtgaagaagctaaatgattctgatcatcagtccagtacctcacccctcatggaagga acacccacaatcaaatccaaaaagaagctgctacaaatcattgataccaccctgttaaag tgttacctgcatacaaatgtagcactggtggcaccgttgctacgtctggagaacaatcac tgccatattgaggagagtgagcatgtactaaagaaggcacacaaatacagtgagctgata atactgtatgagaaaaaaggtctgcatgagaaagcattacaggtactggtggatcagtca aagaaagccaactcgcctttgaagggtcatgagaggacagtgcaatatctgcagcatttg ggcacagagaacttgcacttggtattttcctactctgtctgggtgctaagagattttcct gaagatggactgaagatatttacagaagacctccctgaagtggaagctttgccacgagac aaagtgctcagtttcttgatagaaaattttaaaagcttgactattccttacctggaacac atcattcatgtctgggaagaaacgggtgcggactttcacaactgtctgatccagctgtac tgtgagaaagtgcagggcttaatgaaagagtatctcagttctttccctgcagataaagct ccggtgcctgctggggaggaaggaggagacttgggggattaccggaaaaagctgctgctt tttttggagaagtctagctggtatgaacctagtcgactaattagtgacttcccttttgat ggtctcctagaagaacgtgctctgctcttgggtcgtatggggaagcatgagcaagctctg tttatttatgttcatattttgaaggacaccagcatggctgaaaactactgccataaacat tatgacagaaacaaagatggcaacaaagatgtgtatctgtccctgctccgcatgtatctc tccccacccagtgttcattgcctgggaccgatcaagatggaggtgctggagcctcaagcc aatctgcaggctgctctgcaggttttggagctgcaccacagcaaactggataccactaag gccataaacctgctcccagcaaatacgcagattagtgagattcgcatcttcttagagaaa gtacttgaagaaaatgctcagaagaaaagatttaatcaagtgctcaagaatcttctccat gcagagtttctgagggtccaggaggagcggatcttgcatcagcaagtaaagtgcattatt acagaggagaaggtgtgcactgtttgtaaaaagaagataggtaacagtgcatttgctcga taccctaatgcaatagtcgtgcattatttctgctccaaagaagtcaatacactggacacc tga

DBGET integrated database retrieval system