Cyanistes caeruleus (blue tit): 111930522
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Entry
111930522 CDS
T05602
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111930522 (CTR9)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
111930522 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
111930522
NCBI-ProteinID:
XP_023784347
UniProt:
A0A8C0V819
LinkDB
All DBs
Position
5
AA seq
1168 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPISRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKAEEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHTRNSNSDSEEGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSSARASE
EESDSDRSPRKRRRSESEQSDNESVQSGRSRGSGGSENESRPASRSAESDRDSERGSDHE
GSARASGNESEAEASNDEGSEGGSDDSD
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagatccctctccgggacaccgacgaggttatcgagcttgac
ttcgatcagttgcctgagggtgatgaagttataagtatactgaaacaggaacacacccag
ctgcacatatggattgccctagcgctggagtactacaagcaaggcaaaacagaagacttt
gtgaagctgctggaagctgcccgcatcgatggcaacctggactacagagaccacgagaaa
gatcagatgacatgtctggacactctggcagcctactatgtccagcaggctcggaaggag
aagaacaaagacaacaagaaggagctcatcacccaggccactctgctgtacactatggct
gacaaaatcatcatgtacgatcagaatcacttgttgggaagagcctgcttttgtctgctt
gaaggtgataagatggaccaagctgatgcacagttccacttcgtgctcaaccagtctcca
aataatattcctgccctacttggtaaggcatgcatttctttcaacaagaaggattataga
ggagcccttgcctactacaagaaagcactgcgtaccaatccaggctgcccagccgaggtt
cggttgggaatgggccactgctttgtgaaactgaacaagctggaaaaagctcgcttggcc
ttcagcagggccctggagctgaattccaagtgtgtcggggccttggttggactggctgtt
ctggaactcaataataaggaggctgattccatcaagaatggtgttcaactcctctccagg
gcttacacaattgatcccagtaatccaatggtgttgaatcacttggctaatcacttcttt
ttcaagaaggactatggtaaagtacaacacttggctcttcatgctttccacaacacagaa
gtggaagcgatgcaggcagagagctgttaccagctggcgaggtcttttcatgtgcaggaa
gattatgatcaagctttccagtattattaccaggccactcagtttgcctcatcttctttc
gtacttccattttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgct
tcacaatgctttgaaaaagtcttgaaagcctatcctaacaattatgagactatgaaaatc
cttggatctctttatgcagcttcagaagaccaggagaaacgggatattgcaaaggggcat
ttaaagaaagtcacagaacaatatcctgatgatgtagaggcatggattgagctagcccaa
attctagaacagactgatatacagggtgctctgtcagcgtatggaacagccacacgcatt
ctgcaggagaaagtacaggctgatgtccctccagagatcttgaataatgtgggtgccctg
cacttcaggctgggaaacctgggagaagcaaagaaatacttcttggcgtcactggatcgt
gcgaaagcagaggctgagcatgatgagcattactacaatgccatctctgtgacaacatcc
tacaaccttgccaggctctacgaggccatgtgtgaatttcatgaagcggaaaagctctat
aaaaacattttgagagaacatccgaattatgttgattgctacttgcgcttgggagctatg
gccagggataaaggcaatttttatgaggcttctgattggtttaaagaagcacttcaaata
aatcaggatcatccagatgcctggtctctgattggcaatcttcatttggctaaacaagag
tggggtccaggacagaagaaatttgaaagaatattgaagcagccctccacacagaatgat
acttattccatgctggctcttggcaacgtctggttgcagactctccatcaacccacaaga
gacagagaaaaggagaaacgtcaccaagaccgcgctttagccatctacaagcaagtcctc
agaaatgacccaaagaatttgtatgctgctaatggcataggagctgtcttggcacataaa
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggccacagcagatatc
agcgatgtgtggctgaatttggcacatatctacgtagagcagaaacagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcaaaacactgaagtgttg
ttatatttggcccgggcactgtttaaatgtggcaaattacaggaatgcaaacaaactttg
ctaaaggccagacatgtggctcctagtgacacagtcctcatgtttaatgtggcattagtg
ctgcaaagacttgctacctctgtcctgaaagatgaaaaaagcaatctgaaggaagttctt
aatgctgtgaaagaactggagcttgcccacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcacttgctgctacagaagccaggcaatgctccgactta
ctgagccaggcccagtatcacgtggctcgggcacgcaagcaggatgaggaggagagggag
ctgcgtgccaagcaggagcaggagaaggagctgcttcgccagaaactgcttaaagaacag
gaagagaagcgtctgagagaaaaagaagagcagaagaaacttctggaacaaagggctcaa
tatgtggagaagaccaagaatattctgatgttcactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggtggtggaggcaggcgttccaaaaaaggagcaggggagtttgatgag
tttgtcaacgatgacagtgatgaagatctgcccatctctagaaagaaaaagaagaggaag
ggcagtggcagtgaacaggatggggaagaagaggagggtgagagaaagaagaagaagagg
aggagacctcagaaggcagaagaggggagtgatgatgaagaacacgaaaacggcccacgg
cctaaaaagcggcgtccacccaaagcagagaagaagaaggctcccaaaccagaacgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgatgattct
tctgatgaggacaaactcaaaattgctgatgatgggcacacgagaaacagcaacagcgat
tctgaggaaggggagcagcagcacagcaaacgcattgtttccgacagcgactccgataac
aggaacaagtctggcagcgaggcaggcagtccccgcaggtccagcgcccgcgcatccgag
gaggagtctgacagtgacaggtccccgaggaagaggcggcgctcggagtcggagcagtcg
gacaatgagtccgtgcagtcggggaggagccgcggctccggcggctccgagaacgaatcg
cgcccagcttcgcgcagcgccgagtccgacagagactccgagagaggctctgaccacgag
ggctctgccagagcttctgggaacgagtctgaagcagaggcatccaatgatgagggctct
gaagggggctcagatgacagcgattag
DBGET
integrated database retrieval system
