Cyanistes caeruleus (blue tit): 111930556
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Entry
111930556 CDS
T05602
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccae04131
]
111930556 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccae04147
]
111930556 (COPB1)
Membrane trafficking [BR:
ccae04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111930556 (COPB1)
Exosome [BR:
ccae04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111930556 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
111930556
NCBI-ProteinID:
XP_023784393
UniProt:
A0A8C0VAJ1
LinkDB
All DBs
Position
5
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKLKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPSHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEVSVGPAQKLVTEMGTYATQSALSSSRPAKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYSSLVQEKKKQNSFNAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSHMLSAKLEEEKLSQKKESEK
RNVTIQPDDPISFMQLTAKNEMSSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNVVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIIDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHLGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKTGL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcagagaatgtgtgttacacattgatcaatgttcccatggactcagagcca
ccttctgaaatcagcttaaaaaatgacctagaaaaaggagatgtcaagttgaagacagag
gccttgaagaaagtaatcattatgattctgaatggtgagaagctgcctgggctcctgatg
accatcatacgttttgttctgcctcttcaagaccatactatcaaaaaactgctgctggtg
ttctgggagattgtgccaaagaccactccagatggcaggctcctgcaggaaatgatccta
gtgtgtgatgcatacagaaaggatctccagcacccaaatgagtttatccgaggctccact
ctccgcttcctctgcaagctgaaggaagcagagctgctggagcctttgatgccggccatc
cgtgcgtgcctggagcaccggcacagctacgtgcgccgcaacgccgtcctggcaatctac
accatctacaggaactttgaacaccttatacctgacgctcctgaactcatccacgatttc
ttggtgaatgagaaagatgcaagctgcaaaagaaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattatttgagtacctgtattgaccaagtgcagacatttggt
gacatactgcagttggttattgttgaactaatttacaaggtctgtcatgcgaatccgtca
gagagagctcggttcattcgctgcatctacaacctcctgcagtcctcgagtcctgcagtg
aagtatgaggctgcaggtactctggttacactctccagtgcacccacagcaatcaaggct
gctgcccagtgctacatagatttgattattaaagaaagtgataataatgtgaagctgatt
gtcttggatcggttgattgagttaaaagagcacccctcccatgaacgagtgttgcaggat
ctggttatggacatcctcagagtgttgagcaccccagatctagaggtgcgcaaaaaaacc
cttcagctggctctggatcttgtgtcttcaagaaatgtggaggagcttgtgattgttctg
aagaaggaagtgattaaaactaataatgtgacagagcacgaagatacagacaagtacaga
cagcttctggttcggacactgcactcctgtagtgttcgcttcccagacatggctgcaaat
gttattccagtgctgatggagttcctcagtgataacaacgaagcggcagccgccgacgtc
ctggagtttgtgcgggaagcgatccagagatttgataacctcagacctcttattgttgag
aagatgcttgaagtctttcacgctattaaatctgtcaagatttatcgaggagcattatgg
atccttggagaatattgcagcacaaaggaggacatacaaagtgtaatgacagaggttcgc
agatcactcggagagatcccaatagtagaatctgaaatcaagaaagaagctggtgagctc
aaacctgaagaagaggtgtctgtgggtccagcccaaaaattagtgacagagatgggcact
tatgcaacacaaagtgctcttagcagttcccgacctgccaaaaaggaagaagacagacct
cccttacgaggattcttgctggatggagatttctttgttgcggcttcccttgctacaact
ttaaccaagattgctttgcgttattcctccctagttcaggaaaagaagaaacaaaattcc
tttaatgctgaagctatgctgctgatggccactattctccacttgggaaagtcttctctt
cccaagaagccaattacagatgatgatgtggatcgtatttcattgtgtctgaaagtgttg
tcagaatgttctcctctcatgaatgacattttcaacaaggaatgcaggcagtctctctct
cacatgctgtcagccaagctagaagaggagaaactttcccagaagaaagaatctgagaag
aggaatgtgacaattcagccagatgatcccatttccttcatgcagcttactgctaaaaat
gaaatgagctcaaaagaagaccagttccagcttagccttcttgcagcaatgggaaacaca
cagaggaaagaggctgctgatcctcttgcttccaaacttaataaggtcactcagctgaca
ggtttctcagaccctgtgtatgcagaagcctatgtccacgtcaatcagtacgacatcgtg
ctggacgtgctcgtggtcaaccagaccagtgacaccctgcagaactgcactctggagctg
gccacgctgggtgacttgaaacttgtggaaaaaccatctcctctgacacttgctccacat
gattttgcaaacattaaagctaatgtcaaagttgcttcaacagaaaatggaataattttt
ggtaatgttgtgtatgatgtctctggagcagccagcgacagaaactgtgtggttctcagt
gatattcacattgacatcatggattacatccagcctgcttcctgtacagatgctgagttc
agacagatgtgggcagaatttgagtgggaaaacaaagtaacagtgaatacaaatatcatt
gatttaaatgaatacttacagcacatactgaagtcaactaatatgaaatgcctgactcca
gagaaggcactttcaggctattgtggctttatggcagccaatctttacgcccgttccata
ttcggagaggatgccctggccaatgtgagcatcgagaagccgattcacctggggccggag
gcgccggtcactggtcacatacggatccgggccaagagtcagggaatggccctgagcctt
ggagataagatcaatctgtctcagaagaagacaggtttataa
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