Cyanistes caeruleus (blue tit): 111930800
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Entry
111930800 CDS
T05602
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03022
Basal transcription factors
ccae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111930800 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
111930800 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111930800 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
ccae03400
]
111930800 (GTF2H1)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111930800 (GTF2H1)
DNA repair and recombination proteins [BR:
ccae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111930800 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
111930800
NCBI-ProteinID:
XP_023784822
LinkDB
All DBs
Position
5
AA seq
559 aa
AA seq
DB search
MVKERSLIVATMATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYAD
IKCQKISPEGKAKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANK
ELEEKNRMLQEDPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPHKQDVGISAAF
LADVRPQTDGCNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYF
HRDRLNTGSKDLFAECAKLDEKGLKAMVSQGVKNPLIDLTALEDKTLDEGYGVASVASTS
NASKSARESSNAAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPL
KKVKLQEAIEYEDLSKNNSVKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFNSIRQ
EMEAYVPKLTQVLSSGDAASTIAVLSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVG
ELLRHFWSCFPVNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLISHIEEML
QTAYNKFHTWQSRRMLKKT
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagagcgaagtctcattgtagccacaatggcaacatcatctgaagaagtgttg
ctgatagtgaagaaggtgcgtcaaaagaagcaggatggggccctgtacctgatggctgaa
cgcattgcgtgggcacctgagggcaaggaccgtttcaccgtcagccacatgtatgcagac
atcaaatgccagaaaatcagtccagaaggtaaagctaaaattcagctgcagctggtattg
catgcaggggacacaaccaacttccacttctccaatgaaagcacagcagtgaaggagcga
gatgcggtcaaggatcttcttcaacaactgttgcccaagttcaaaaggaaagctaataaa
gaacttgaggagaagaacagaatgctgcaagaagatcctgttttgtttcagctctataaa
gaccttgttgtgagccaagtaatcagtgctgaagaattctgggccaaccgtttaagcctg
aatgcaggggataattctgcagcacctcataagcaggatgtgggcatctctgcagcattc
ctggctgatgtacggcctcagacagatggctgcaacgggctgaggtacaacttgacttca
gatattattgaatctatatttcggacataccctgcagtgaaaatgaaatatgcagaaaat
gttccacataacatgaccgagagggaattctggacacggttttttcagtctcattatttt
catcgggacaggctcaatacaggctcaaaagacctctttgcagaatgtgccaaactggat
gagaaaggcttaaaagcgatggtgtctcaaggagtgaaaaaccctctgatagatttaaca
gctttggaagataaaacattagatgaaggctatggtgttgcttctgtggcctctacatca
aatgcctcaaagtccgctagagaaagtagcaatgctgccatcataaaacgctttaatcat
cacagtgccatggtccttgcagctggcctcaggaaacaagaagcacaaaatgaccattac
agtgagaccagcagtacggatggaaactccagggattcagatttctttcagccaccactg
aaaaaggtaaaactgcaggaggccattgaatacgaagatttatcaaagaataatagcgtt
aaaactattgcactaaacttaaagaaatctgataggtattaccatggtccaactccaatt
caatcacagcaatatgcaaccagtcaggatataattaattcatttaatagtattagacaa
gaaatggaagcatatgtacccaaactaactcaggttctttcaagtggtgatgctgccagc
actattgcagtcctgtcacctggaggagcacttatgcagggtggaacacagcaagccata
aaccagatggtgccaaatgacattcagtctgaactgaaacacttgtatgtggcagtaggg
gaactgctacgacacttctggtcctgcttccctgttaacacaccattcctagaagaaaag
gttgtgaaaatgaggagcaacttggaaagatttcaggttacaaagctctgcccattccaa
gaaaagattcggagacaatatttaagcacaaatttgataagtcatatagaagagatgctg
cagacagcctacaataagttccacacgtggcagtcccggcgcatgctgaagaagacgtga
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