Cyanistes caeruleus (blue tit): 111930949
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Entry
111930949 CDS
T05602
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111930949 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111930949 (TAF5)
03036 Chromosome and associated proteins [BR:
ccae03036
]
111930949 (TAF5)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111930949 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
111930949 (TAF5)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111930949 (TAF5)
STAGA complex
111930949 (TAF5)
TFTC complex
111930949 (TAF5)
SAGA complex
111930949 (TAF5)
SLIK complex
111930949 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
CDK5RAP3
Cytochrom_D1
RAB3GAP2_N
VID27
Motif
Other DBs
NCBI-GeneID:
111930949
NCBI-ProteinID:
XP_023785036
LinkDB
All DBs
Position
6
AA seq
695 aa
AA seq
DB search
RESEEILRREARLLGDDLGAVALSPASAGLLGGSGSDADSGEALLGRGTSAAAVAIGGNV
ATVATSSPGVAAVAAVPPGKVGGAVVVEDQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFI
ECSLDCHRAELSQLFYPLFVHMYLELVYNQHESEAKSFFERFHGDQECYYQDDLRVLSSL
TKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGM
PRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEFDVPLDDEDEEGENEEGKPKKKKP
KKDNVGSKSKKQDPNAPPQNRIPLPELKDSDKLDKVMNMKEAARRVRLGPECLPSICFYT
FLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKTAADLSLIDKESDDVLE
RIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHN
YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATG
SADRTIRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVG
ELKGHSDTIYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENS
QDLLLGTYMTKSTPVVHLHFTRRNLLLAAGAYSSQ
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
cgcgagtccgaggagatcctacgtcgcgaagcccgcttgcttggcgacgacctgggtgct
gtcgccctcagccccgccagcgccgggctcctggggggctccgggagcgatgcggactcc
ggcgaggcgctgctcggccggggcaccagcgctgccgccgtcgccatagggggcaacgtc
gccactgtcgctacttccagccccggcgtggctgcagttgccgccgtgccgccggggaaa
gtcggaggtgcggtggttgtggaggatcagccggacgtgagcgcggtgttgtcagcctac
aaccagcaaggagacccgacgctgtacgaggagtactacagcggattgaaacacttcatc
gagtgctccctggactgtcatcgggcagaattgtctcagctcttttatcctctctttgtg
cacatgtatttggaattggtctacaatcaacatgagagtgaggcaaagtctttttttgaa
agatttcatggggatcaggagtgctattaccaggatgacctgcgtgtattgtcgagctta
accaaaaaagaacacatgaaaggtaatgagaccatgctggatttccgaacaagcaagttt
gtgctgcgcatttcccgtgactcttaccaactcctgaagaggcatcttcaggaaaagcag
aacaatcagatctggaacattgttcaggagcatctttacattgacatctttgatggaatg
cctcgcagtaaacaacagatagatgctatggttggaagcttggctggggaggcaaaacga
gaggctaataaagcaaaggttttctttggcttgttgaaagaaccagagtttgatgtgcct
ttggatgatgaagatgaagaaggagaaaatgaggaaggaaagccaaagaagaaaaaacct
aagaaagataatgtagggtcaaaaagtaaaaaacaggatcctaacgctcctccccaaaac
agaattcctctgccagaactgaaagactctgacaagctggataaagtaatgaatatgaag
gaagctgcgaggcgagtgcgtcttggacctgagtgcctgccctccatctgtttctacaca
ttccttaatgcttatcagggtctaactgcagtggatattacagatgactccagcatgatt
gtaggaggctttgctgactccactgtcagagtgtggtctgtgactccaaaaaagctacgt
agtgtgaaaacagctgcagacctcagtctcattgacaaagaatcagatgatgtcttggag
aggatcatggatgagaaaacagcaagtgagttgaagattttatatggtcacagtggacct
gtctatggcaccagcttcagtcctgataggaattatctattgtcctgttctgaggatggc
accgtgagattgtggagtctccaaacattcacatgtttggtgggatataaaggacacaac
tatcctgtttgggatacacagttctctccttacggctattactttgtttctgggggacat
gacagagtggctcgtctgtgggcaacagatcactaccagccattacggatctttgctggc
catcttgcagatgtgacatgtacccgatttcatccaaactccaactatgttgctacaggc
tcagcagacaggactataaggctctgggatgttttgaatgggaattgtgtaagaatattc
actggacataagggaccaattcattcattggcattttctcctaatggacgattcctggct
actggagcaacagatggaagagttctgctgtgggatattggacatggcttgatggttggc
gaattgaaagggcactctgacactatctacgcgctcagattcagtagggatggggagatt
ttagcatcaggttcaatggataacacagttcgtctgtgggatgctgtgaaggcttttgaa
gacttagaaactgatgacttcactacagccactggacacataaatttgcctgaaaactca
caggacttgttactgggcacatacatgaccaaatcaacccccgttgttcatctccatttc
acacgcaggaacctgctgctggctgcgggagcctacagctcacagtag
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integrated database retrieval system
