Cyanistes caeruleus (blue tit): 111931669
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Entry
111931669 CDS
T05602
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccae03036
]
111931669 (MSH4)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Meiosis-specific proteins
Others
111931669 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
AAA_28
AAA_30
CTD
AAA_18
Motif
Other DBs
NCBI-GeneID:
111931669
NCBI-ProteinID:
XP_023786138
LinkDB
All DBs
Position
6
AA seq
936 aa
AA seq
DB search
MAGVGERAAVSATSESYTGRGSSTPGVGGRAEQTPRYTLGLLQTPHSSKSTGGSSSGGAR
PAGSSGEGLAAARAAGSSAGKPAVSERGESYFGDKSSCVENANTLNLTSSSSMRGLNSTC
IGKTPLSSGRSGCRSHTPLMGYSVTSSSAVSAHTVASVIVAVVEGRGLARGEVGMASIDL
KNPEIILSQFADNTTYAKVITKLKILTPLEIIMSNTACDAGNTTKLFSLIMEHFKNVTFT
TVQRKYFNETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNAVYAPKS
LKVRFQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLLGVLNYTKTPGGSRRLRSNILEP
LVDAETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKI
TNLIYLKHTLELVEPLKAAIRSCNAQLLKAYYNSLEDTRFGIILEKITTVINDDTRYTKG
CLSMRTQKCYAVKPNINEFLDIARRTYTEIVDDIAGMIAQLAEKYSLPMKTSFSSARGFF
IQMNADCSTLPNGQLPSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCK
LLNEIYEHIHCLYKLSDIVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIA
MEKPVSNNTYLTEGNNFVIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQ
IFTRIGMDDDIETNASTFMKEMKEITYILQNANDKSLIIIDELGRGTSAEEGIGICYAAC
EYLLNLKAFTLFATHFLELCHIDALYPNVENYHFEVQHVRSSAGNKEKIAYTYTLSKGYT
EEKNYGLKAAEVSSLPSSIILDAKEITNHIAKQILHGHKSTPEMMKQRAAYQLAMRLVQT
ARNSRLDPDSLRVYLKALKRKYETSCSTPVKNDEHE
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgtgggcgagcgggcggccgtctcggccacctcggaatcttacacgggccgc
ggctcttccacgccaggcgtgggcgggcgggcagagcagacgccccgttacaccttgggg
cttcttcagacgccgcacagctcgaagagcaccgggggctcctccagcggcggggcacgg
ccggcaggctccagcggggaaggcctcgcagccgcccgggccgccgggagcagcgcgggg
aagccggctgtttccgaaaggggagaatcatattttggtgacaaaagttcttgtgtagaa
aatgctaatacattgaatctcacgagttcttcttctatgcgaggcctgaatagcacatgt
ataggaaaaacacctctctcttctggtagatctggttgcagaagccatactcctcttatg
ggatattcggttacatcctcatctgcagtttctgctcatactgttgcatcagttattgta
gctgtagtagaaggaagaggccttgccagaggtgaagtaggaatggccagtatagattta
aaaaatcctgagattatactgtcacaatttgcagacaatacaacatatgccaaggttatt
actaaactcaagattttaacaccactagaaataataatgtcaaacactgcatgtgatgca
gggaatacaaccaaattgttcagtctcataatggagcatttcaagaatgtgacttttaca
actgtccagagaaaatacttcaatgaaacaaagggtttggagtacatagaacaattgtgt
gcatctgaatttagtaccattttcatggaagtccaatcaaagtattactgtcttgcagct
gctgcagctttgctaaaatatgttgaatttattcaaaacgccgtttatgctcctaaatca
ctcaaggtgcgtttccaggggagtgaaaaaacagctatgatagattcatcatcagcacaa
aatcttgaactagtgattaataacagagattctcggaatggtcacacacttcttggtgtt
ctaaattatactaaaactcccggtggaagtcgaagacttagatctaatatcctggaacct
ctagttgatgctgaaacaattaacacaagactggactgtgttcaggaattactccaggat
gaggagctctttttcggtcttcaagcagttatctcaaagttcctggatacagaacaacta
ctttcagttttggtacagattccaaagcaggatacagttaaaactgctgaatcaaaaata
actaatttaatctacctgaagcatactttagaactcgtggagccgctgaaagctgctata
agaagctgtaacgcacagctgctaaaggcttattacaattctcttgaagatacaagattt
ggaattatacttgaaaagattacaactgtaattaatgatgatacaagatacacaaaagga
tgtctaagtatgaggacccagaagtgctatgctgttaagcctaacatcaatgaattcctt
gacatagctcgcagaacatacacagaaattgttgatgacatagcaggtatgatagcacaa
cttgcagaaaaatacagcctaccaatgaaaacgagtttcagctccgctcgtggatttttt
atccagatgaatgctgattgttcaacattacctaatggccagcttccttcagaatttaca
aagatcacaaaaatgaaaaacacatatagcttcacttcagcagatttaataaaaatgaat
gaaagatgtcaggagtccctgagagaaatatatcacatgacctacttaatagtgtgtaaa
ctactgaatgagatttatgaacacattcattgcctatacaagctgtctgacattgtgtct
atgctggatatgctgctttcatttgcccacgcctgcactctttctgattatgttcgtcca
gaatttaccgatactttagcaatcaagcagggctggcatcccattcttgaaaagatagct
atggaaaaacctgtgtctaacaacacatacctgacagagggaaacaattttgtcattatt
acgggaccaaatatgagtggaaaatcaacatacctgaaacagattgctctctgtcaaatt
atggctcagattggttcttatgtcccagcagagtattgttcttttcgaattgctgagcag
atttttaccagaataggtatggatgatgatattgaaacaaatgcatcaacattcatgaag
gaaatgaaagagataacgtacatcctacaaaacgctaatgataaatcactcatcattatt
gatgaacttggcagaggtaccagtgccgaagaaggtattggcatttgttacgctgcctgt
gaatatctgttgaacttaaaggcatttacactgtttgctacacatttcctggaactatgt
catatagacgctttatatcccaacgtggaaaactaccattttgaagtgcaacatgtgaga
agcagtgctggaaataaggagaaaattgcttacacttacacactttctaaaggatacaca
gaggaaaagaactacggactaaaagctgcagaagtgtcctccctaccatcatccataatt
ttggatgcaaaggaaatcacaaatcacattgcaaaacaaattttgcacgggcacaaaagc
actcctgagatgatgaaacagagagctgcataccagttagcaatgagactggttcagact
gccagaaattctcgactggaccctgacagtttgcgagtatatttgaaagccctgaagaga
aagtatgaaaccagttgttccacacccgtaaaaaatgatgagcatgagtaa
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