Cyanistes caeruleus (blue tit): 111931830
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Entry
111931830 CDS
T05602
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccae04147
]
111931830 (COL18A1)
00535 Proteoglycans [BR:
ccae00535
]
111931830 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
ccae00536
]
111931830 (COL18A1)
Exosome [BR:
ccae04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111931830 (COL18A1)
Proteoglycans [BR:
ccae00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
111931830 (COL18A1)
Glycosaminoglycan binding proteins [BR:
ccae00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111931830 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Fz
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
111931830
NCBI-ProteinID:
XP_023786274
LinkDB
All DBs
Position
7
AA seq
1926 aa
AA seq
DB search
MAPPRLGFLLLLACCFSCSETQLLHWVWDSRKTTGSPAAPGEGIPALEPPTSAAAPAPSP
SPGTWGGEVAGNVTTPRRQEPDPATAAPGGEGTAAKTTEQWDRNAMVESTVWPSIAPPHS
MSPAPGQQAASSPTDDPRLLGTGTIEHFQILGSGNTEDPQLLGTGTIEDLHLLGSGNTEH
LQLLGTGTTEHLQLLSMRTAKEAQFLGSVTSKDAQLLGTRTTEDLQLLESGTTENPQLVR
MGTTEDPQLLGSRTSKDPELLGSGTTEDLQLLGLGTTEDPQLLGMISTTEDPQLLGTWTT
EDPQLLGKGTTEDLQLPGMLTTENLQLLAMRNTKDTQLLRTVTPEDPELLRTVTTENPEL
LGTGTPTAMETQVSLQRPAGPQPGSAPFPFSPGDSTRERALPFQDPSAQLPHHPHGASPS
LWHGTGHPGLALVSRNGSQGPPWPDQRVDKGVDLPAARTSVSLEFDLLTATMRLYGSGGA
GLASFFPGLMTVAGRCQPIPTHLPFCSLLGTSHVRLPNYLRHGSEEEIRVALHEWEGLLE
SRCHRYLEWFLCLLLLPGCSPSVPVTPPPCQGFCEAVRDLCWTHLASGRLPLPCDALPEE
DEGVSCVFINSSAESLSAEVSLLELIGDPPTEEIHRIYGPDNNPGYVFGPNANTGQVARY
HLPSPFYRDFSLLFHIQPTTPRAGVLFAVTDSSQSIIYVGVKLSELRAGQQQIIFYYTEP
GSPSSYPAATFTVPTLLNQWTRFAISVEEEEVVLYLDCEEHERVRFERSPDEMELEEGSG
LFVAQAGGADPDKYQGVIADLKLRGDPRAAERQCEEEEDDTEVSGDFGSGMEGGQKFSGK
VEGVPGLVEAVPVTSPPVAGGSGPRSGGGSLQQAERTRVEETLQVSTGGTGRKGEKGEKG
ERGLKGDSGTDGTIGPGSVKGQKGEKGDLGVKGSAGFGYPGSKGQKGEPGDPGPPGAPSW
HTDGSVVEQVTGPPGPPGKDGAPGRDGEPGDPGEDGKPGEMGPPGFPGLPGEPGLKGEKG
DPGMGPRGPPGPPGPPGPPGPSSKNDKLTFIDMEGSGFGGDLESLRGPQGPPGPPGPPGV
PGLPGEPGRFGMNRTDLPGPPGLPGRDGIPGPPGPVGPQGPPGRDGEAGQPGPKGERGDV
GDLGLPGLPGPKGNKGEVGPVGPPGEMGLAGLPGPIGPRGQPGPPGPPGPPGPGYDAGFG
DMEGSGLSFSPGPPGPEGPQGVPGLPGVKGEVGSPGQPGLPGPKGDAGMPGVDGRPGLEG
FPGPQGPKGDKGSAGEKGERGQDGVGLPGPPGPPGPPGQVITVSSEDKSLVAFPGPEGRP
GHAGFPGPVGPKGDQGSTGPQGAPGLKGEKGEPGVIISPDGTVVTAKVKGEKGEPGLRGP
MGPSGPPGRAGMKGEIGFPGRPGRPGMNGLKGEKGDPADVLGLRGPPGLPGPPGPPGPPG
SIVYNNGNTFSDSGHPVFPGFHQFPGQKGEKGDTGPPGPPGQFPYDVSHFSTSLRGDKGD
AGPKGEKGEPGSTPLYGAGVSGLPGPPGPQGYPGLPGPKGDSIVGPPGPPGPQGPPGIGY
EGRQGPPGPPGPPGPPSFPGPHRQAVSIPGPPGPPGPPGPPGTSGMFLGIRAVPTYQAML
SSAHELPEGSLVFLTDRQELYVRLRGGFRRVLLEEHNLIPSSALDNEVYDKPPTLRYAGP
QPHGPLHPLRNHVPPATARPWRGDEVVANQHRLPEQPLLHHQHELINGYYIHRRPDPVPV
AAHVHQDFQPALHLVALNTPLSGGMRGIRGADFQCFQQARQVGLAGTFRAFLSSRLQDLY
SIVRRADRATVPIVNLRDEVLFNNWEALFMGSGAPLQAGARILSFDGRDVLRDAGWPQKS
VWHGSDAKGRRLPESYCETWRTEERTVTGQASSLASGKLLEQVASSCQHAFIVLCIENSF
MTSAKK
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
atggccccacctcgcttgggatttctgctcctcctggcttgctgcttctcctgctctgaa
acacagctcctgcactgggtttgggacagcaggaagaccacaggaagcccagcagcaccc
ggcgagggaatcccggcgttggagccgccaacctcagcagcagctccggctcccagccca
tctccggggacgtggggcggtgaggtggcggggaatgtcaccaccccacggcggcaggag
ccagatcctgctacagcagctcctgggggcgagggaaccgcagccaaaaccacggagcag
tgggacaggaatgccatggtggagagcactgtgtggccaagcatcgctcctccccacagc
atgtcacctgccccaggacagcaggcggccagcagccccaccgatgaccctcggctcctg
gggacagggaccattgagcacttccagatcctggggtcaggaaacactgaggatccccag
ctcctggggacagggaccatcgaggacctacatctcctggggtcaggaaacactgagcac
ctgcagctcctagggacagggaccactgaacatctacagctcctgagtatgaggacagcc
aaagaagcccagttcctggggtcagtgacctccaaggatgcacagctcctggggacaagg
actactgaggacctgcagctgctggaatcagggactactgagaacccacagctcgtgagg
atggggaccactgaggacccccagcttctggggtcaaggacctctaaggaccctgagctc
ctggggtcagggactactgaggatttacagctgctggggttgggcaccactgaggaccct
cagctcttagggatgataagtaccacagaagacccacagctcctggggacatggaccaca
gaagacccacagctcctggggaaagggaccactgaggacctacagctcccaggcatgttg
accactgagaatctgcagctcctggcgatgaggaacaccaaggacacccagctcctgagg
acagtgacccctgaggacccagagctcctgaggacagtgaccaccgagaatccagagctc
ctggggacgggaactcctacagcaatggagacacaggtgtccttgcagagaccagcgggt
ccccagccaggtagtgccccttttcctttctcaccaggtgacagtacccgtgagcgggca
ctgcccttccaggacccctcagcacaacttccccatcacccgcatggagcatcaccaagc
ctgtggcacggcaccggccacccggggctggctctggtcagcaggaatgggagccagggc
cccccttggcctgaccagagggtggataagggtgtggatcttcctgctgcccgtacctcc
gtctctctggagtttgatttactaaccgctaccatgcggctctacgggagtggcggcgcg
gggctcgcatccttctttccaggactgatgacagtggccggccgttgccagcccatccca
acccacctgcccttctgcagcctgctgggcaccagccatgtccgattgccaaattacctc
cggcacggcagcgaggaggaaattcgggtggctttgcatgagtgggaggggctgcttgag
tcacggtgccatcgctacctggagtggttcctctgcttgctgctgctccccggctgtagc
ccctcggtccccgtaacccccccgccgtgccagggcttctgtgaggccgtcagagacctg
tgttggactcacttggccagcgggcgcctgcctctgccttgcgatgctctccctgaggag
gatgaaggggtttcttgtgtctttattaattcttctgcagagagcctgagtgcagaggtc
agcctgctggagctgattggggacccgccaacggaggagatccacagaatttatggcccc
gacaacaaccctggctacgtctttggtcccaacgccaacacgggccaggtggcccggtac
cacctgccaagccctttctaccgggacttctcgctgctgttccacatccagcccaccacg
ccccgggccggcgtgctctttgctgtcacggactcctcgcagagcatcatctacgtgggt
gtcaagctctcagagctgcgggcgggccagcagcagatcatcttctactacacagagccg
ggctcacccagctcctacccagctgccaccttcaccgtgcccaccctgctcaaccagtgg
acacgctttgccatcagcgtagaggaggaggaagtcgtcctctacttggactgtgaggag
catgagcgcgtccgcttcgagcgctccccggatgagatggagctggaagagggctccggg
ctctttgttgctcaggctggaggggctgacccagataaataccagggggtgattgcagat
ttgaagctgcgaggtgacccgcgagcggccgagcgccagtgcgaggaagaggaggatgac
acagaggtctctggggattttggcagcgggatggaaggtggacagaagttctcgggcaag
gtagagggtgtcccagggctggtggaggctgtccccgtgacctctccccccgtggcgggg
ggcagtggcccgaggagtggcggggggtccctgcagcaggccgagaggaccagggtggag
gagacgctgcaggtctccacgggaggcaccggccggaaaggcgaaaagggggagaagggg
gaacgtggcttgaaaggggactcagggaccgatggcaccatagggccaggcagtgtcaag
ggtcaaaagggtgagaaaggagacctgggtgtcaagggcagtgctggatttggctaccct
ggctctaagggccagaaaggagaaccaggtgaccctggaccccctggggccccgtcttgg
cacactgatggctcggtggtggagcaggtcaccggccccccagggccaccagggaaggat
ggagcccctggcagggatggcgagcctggcgatcctggcgaggacggcaaacctggtgaa
atggggcccccggggttccctgggctgccaggggagccgggcctgaagggggagaagggt
gacccaggcatggggccgaggggacctcctggaccacctggccctccaggaccgccggga
ccttcctccaagaatgacaagctgaccttcatcgacatggagggctcaggcttcggtggt
gacctggagagcctgcggggtccacaagggccacctggtcctccagggccacctggtgta
cctggtttgccaggagagccaggacggtttgggatgaaccgcacagacctgccaggacca
ccagggctgccgggcagggatgggatccctgggcccccggggccagtgggtcctcagggt
cctccaggaagagacggggaggctgggcagccagggcccaaaggagagcggggcgatgtg
ggtgacctcggcctccctggcctaccgggacccaagggcaacaaaggagaagtgggaccg
gtgggacccccaggagaaatgggcttagctggccttcccgggcccatcggaccccgaggg
cagccagggccccccggccccccaggaccaccagggccaggctacgatgctggatttggt
gacatggagggctcggggctgtcattcagccctggaccacctggacctgaaggaccacag
ggtgtgccgggactgccaggggtgaagggagaggttggcagccccggacagcctggcttg
ccaggaccaaagggagatgctggcatgcctggtgtggatggccgccctggcctggagggc
ttccctggaccacagggacccaaaggtgacaaaggcagcgccggtgagaagggagagcga
ggccaagatggagtgggcctgcctggcccccctggaccacctggtccccctggacaggtc
atcactgtctccagtgaagataagtcattggtggcttttcctggtccagagggaagacca
ggccacgctggcttcccgggtccagtgggaccgaaaggtgaccaggggtcaactggtccc
cagggtgccccagggttgaagggggagaagggggagcccggtgtcatcatcagccctgat
gggaccgtggtcactgccaaggtgaagggagaaaagggggagccggggctgcggggccca
atgggaccatcgggtcccccgggacgagcagggatgaagggagagattggctttccgggc
agacccggacgtcccggcatgaacgggctgaagggcgagaagggtgaccccgcggatgtg
ctgggcttgcggggccccccaggcctcccaggaccccctgggccccctgggccacctggc
agcatagtctacaacaatggcaataccttcagcgactctggccatccggtgttccctggt
ttccaccagttcccaggacaaaagggagaaaaaggtgacactggacccccaggaccccca
ggccagttcccctatgacgtgagtcacttcagtaccagcctgcggggtgacaagggggat
gcaggtcccaagggtgagaagggcgagccaggcagcaccccactctatggtgctggagtc
tctggacttccagggcctccagggccccagggataccctgggctgccgggtcccaagggg
gacagtattgttgggccaccggggcctccaggacctcagggtccccctggtatcggatat
gaggggcggcaaggcccccctggccctcctggtcctcccgggccaccctccttcccaggt
cctcacagacaagctgtcagcatccctggacccccgggaccaccaggaccccctggaccg
ccaggcactagtgggatgttcttggggatccgggccgtgcccacgtaccaggcaatgctg
agcagcgcgcacgagctgcctgagggcagcctcgtcttcctgaccgaccggcaggagctc
tatgtccgcctgcgtgggggcttccgcagggtgctgctggaggaacacaacctgatcccc
agttcggctctggacaacgaggtgtacgacaagccgcccaccctccgctacgctggcccc
cagccccatgggcccctgcacccgctccgcaaccatgtccccccagccaccgcccgtccc
tggcgtggggacgaggtggtggccaaccagcaccgcctgcccgagcagcccttgctgcac
caccagcatgaactcatcaatgggtactacatccaccgccggccagatcctgtgcccgtg
gccgcccatgtgcaccaggacttccagcctgcacttcacctggtggccttgaacaccccg
ctgagtggcggcatgcgcggcatccggggcgccgatttccagtgcttccagcaagcccgg
caggtcgggctggctggcaccttccgcgccttcctgtcctcacgcctgcaggatctctac
agcatcgtgcgcagggccgaccgtgccaccgtccccatcgtcaacctccgggatgaagtg
ctcttcaataactgggaagcccttttcatgggcagcggggccccactgcaagctggtgcc
cgcatcctctcatttgatggccgggatgtcctgcgggatgcgggatggccgcagaagagt
gtctggcacggctcggatgccaagggccggcgcttgcccgagagctactgcgagacgtgg
cggacagaggagcgcacagtcaccggccaggcttcgtccctggcctctggaaaactgctg
gagcaggtggccagcagctgccagcacgccttcatcgtcctctgcatcgagaacagcttc
atgacctccgccaaaaagtga
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