Cyanistes caeruleus (blue tit): 111932206
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Entry
111932206 CDS
T05602
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111932206 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccae03400
]
111932206 (XRCC5)
DNA repair and recombination proteins [BR:
ccae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
111932206 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
111932206
NCBI-ProteinID:
XP_023786975
UniProt:
A0A8C0VTW6
LinkDB
All DBs
Position
7
AA seq
727 aa
AA seq
DB search
MASSGKVAIVLCLDVGLTMSSSSPGEESSLEQAKKIMTKFVQRQVFAESKDEVAVVLFGT
NGTRNDLSSKDQYQNITVHRSLMLPDFDLLEDIQDVIKAGSKQADFLDAIIVCMDLLQKQ
TIGKKYEKRHIELFTDLSSPVSEDQLGIIIANLKKTGISLQFFLPFPVSVDGGSGDTSAS
VRAHIHGNSFPIKGLTEQQKQGIDVVRKLMYTLDEEGGLEEIYTFRESLERLSMFKKMER
RPMPWPCQLTIGPNLSIRIVAYKSVTEERMKKLWTIVDAKSLRKEDVQKETVYCLNDDDE
TEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEGKCFSVLGFTRSSQIQRHYYMGSQAL
KVFAAKGDENAAVAFSALVRALDELKVVAIVRYAYDRRCNPQIGVAFPCIKDAYECLIYV
QLPYMEDLRQYVFSSLKNSKKCVPTADQLSAVDSLIDSMNLVHEDGETSEDLFKPSKIPN
PHFQRLYQCLQHKAFHPDKPLPPIEQHVLEMLEMPCVVRERCQAPLERVKALFPLKEIGK
KKEEKTAQDIFKDNEDEPSLKKPKIEDEEESFSIMKLAEGSITSVGSVNPAEDFRILVRK
KNADFKDVSQQLINRIDQFLENKGSQYYIKGIACIRVFREEAIKLSKVQCFNDFLQALKS
KLEDKALSDFWEIMVQDRISLITKDEVEQSSVTGEEAAKFLAPKEQKNESLPPTDEGGDV
DDLLDMM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagcggcaaggtggcaatagtgctgtgcctggatgtaggccttacaatgagc
agctcttctcctggtgaagagtcttcacttgagcaagccaagaagattatgacaaagttt
gtgcagagacaggtttttgctgagagtaaagatgaagttgctgtagttttgtttggcact
aatggcactagaaatgacctttccagtaaggatcaataccaaaatattactgtacatagg
tcactaatgctgccagattttgatctgctggaagacattcaagatgtgattaaagcaggc
tctaaacaagcagactttttggatgctattattgtgtgtatggacttgcttcagaagcaa
acaataggaaagaaatatgagaagagacacattgaactgtttacggatcttagtagtcct
gttagtgaggatcagctgggaattatcattgctaacttgaagaaaacaggaatttcactt
cagttttttctgccatttccagtgagtgttgatggtggaagtggagatacaagtgccagc
gtacgtgctcatatacacggaaactcttttccaataaagggtttaactgaacaacaaaag
cagggtattgatgtggtgaggaaactcatgtatactttggatgaagaaggagggctggaa
gaaatttatactttcagagagagcctggaacgtctttcaatgtttaagaaaatggaaaga
aggcctatgccttggccctgccagctcactattggtcccaatttgtctataaggattgtg
gcctacaaatcagtcacagaagagaggatgaaaaaactttggacaattgtggatgctaaa
tccctcagaaaagaggatgtgcaaaaggaaactgtttactgcttgaatgatgatgatgag
acagaggttcagaaagatgatactattcaaggttttcggtatgggagtgatatagttcct
ttttccaaggaagacgaagagcaaatgaaatacaaaacagaaggaaagtgtttttctgtt
ttgggattcactagatcctcgcagatccagaggcattactacatgggcagccaggctctg
aaggtctttgcagcaaaaggcgatgagaatgcagcagttgctttttctgcacttgttcgt
gcattggacgagttgaaagtggtggctatagtgcgctatgcttatgatagaagatgcaac
ccacaaattggagtagcttttccgtgtattaaggatgcatatgagtgtctcatctatgtg
cagctaccctatatggaagacctaagacaatatgtgttttcatccttgaaaaacagtaaa
aaatgcgttcctacagcggatcagttatctgctgttgactcactgattgattctatgaat
ttggttcatgaagatggagaaacttctgaggacctatttaagcccagcaaaattccaaat
cctcattttcagaggttgtatcagtgtttgcagcacaaggcttttcaccctgataagcca
ctgccgccaatagaacagcacgtcttagaaatgctggagatgccttgtgtggtaagagaa
aggtgtcaggctcctctggaaagagtaaaagcacttttccccctaaaggaaattggcaag
aaaaaagaagagaagactgcacaagacatcttcaaagacaatgaggatgaacccagcctt
aagaaaccaaaaattgaagatgaggaagagagctttagcattatgaaacttgctgaaggc
agtatcacctctgtaggcagtgttaacccagcagaagatttccgaattctggtgaggaag
aaaaatgctgacttcaaagatgtgagtcagcagttgataaaccgcattgatcagttcttg
gaaaataaaggttcacaatactacataaaagggattgcctgtatcagagtttttagagag
gaggccattaagctgtccaaggtgcagtgctttaatgactttctgcaggccctgaaatca
aagttggaagataaagccttatctgatttctgggagatcatggtacaagacagaatttct
ttgatcaccaaagatgaagtggagcaaagttcagtgactggtgaagaggctgcgaagttc
ttggctccaaaagaacagaaaaatgaaagcctgcctcctacagatgaaggtggtgatgtt
gatgatctgctggacatgatgtga
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