Cyanistes caeruleus (blue tit): 111932548 Help Entry 111932548         CDS       T05602                                  Symbol SMG7 Name (RefSeq) protein SMG7 isoform X1   KO K14409   protein SMG7 Organism ccae  Cyanistes caeruleus (blue tit) Pathway ccae03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ccae00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     111932548 (SMG7)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccae03019]     111932548 (SMG7) Messenger RNA biogenesis [BR:ccae03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Other surveillance factors      111932548 (SMG7)    mRNA cycle factors     Common to processing body (P body) and stress granule      111932548 (SMG7) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  EST1_DNA_bind EST1 TPR_2 Motif Other DBs NCBI-GeneID:  111932548 NCBI-ProteinID:  XP_023787401 LinkDB All DBs Position 8 AA seq 1171 aa AA seqDB search MTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKN RANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSA IVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTQWSVSDFIKAFIKFHG HVYLSKSLENLSPLREKLEEQFKKLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQH SYSQDEQLCWTQLLSLFMSFLGVLCKCPLQNDYQDSGASYPLPAVKVSMDWLKLRPSVFQ EAVVDERRYIWPWLISLLNSFQPHEEDLSSNNATPLPEEFELQGFLALRPSFRNLDFSKG HQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFVTEIPELLLEDPSE AKESLALQETSMTEPLCADGSPGLKSVLSSGRSLSNSCDAGEKPMVTFKENIKPREMNRE QGRIYPPKDMARERRDFSKGIVANKNDGKKDNNKRKNETKKCGLDKMQEAGKQNVAVQVK SQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPAYVVPPPVA FSMSTGYTFPSGVSVPGTFLQPTAHSPTGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQT PPPSQQPLSSLPAQAAAQSASQLQVQALAQQQQSPTKVVQGLGKSPPHHSGFQQYPQTDS SKQLWNSPQVQGSLGKIMSVKQPYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFPMEP YNQNPSEVKVPEYYWDSSYGMTDNRVMTQQSNMDRRGKRQGVFCSEQDAVSRMTFEDPKS SPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSQS SSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVTPSAAHQETSLYSLFEGTPWSP SIPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRVTDRWKT DKPAMGGFGLDYLPTTSSSSESSWHQSSAPSGTWAVQGPPAMEDSSAVLMESLKSIWSSS MMHPGPSALEQLLMQQKQKQQRGQGAMNQPH NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgacagattcaaagctgggtccagcagaagtctggacatccagacaggctctacaggac ttatatcaaaaaatgctagtgactgatttggaatatgctttagataaaaaggtggagcaa gacctttggaatcatgcctttaaaaatcagatcacaacactccagggtcaggcgaaaaac agagcaaatccgaatcggagcgaagttcaggcgaacctttctctgtttttagaggcagct agtggcttctacacgcagttattacaggaattgtgcacagtttttaatgtagacctgccg tgccgtgtgaaatcttcccagctggggatcattagcaataaacagacgcacaccagcgcc attgtaaagccgcagtccagctcctgctcctacatctgccagcactgccttgtccacctg ggagatattgctcgctataggaatcagaccagccaggcagagtcttactatagacatgca gctcagcttgtcccttctaatggtcagccttataatcaattggctatcctagcttcctcc aaaggagaccacttgaccacaattttctactactgcagaagcatcgctgtgaagtttcct ttcccagctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgat gaggtgaagactcaatggagtgtgtctgacttcatcaaggcctttattaaatttcatggc catgtgtacctgagtaagagcttggagaatctgagccctcttcgagaaaagctggaagaa cagttcaagaagctgttgttccagaaggccttcaactctcagcagttagtccatattact gtgatcaacctattccaactccaccacctgcgagacttcagcaacgaaacagagcaacac agctacagccaggatgagcagctctgctggacacagctcctgtctctcttcatgtcattt cttggagttctgtgcaagtgtcctttacaaaatgactaccaggactctggggcttcatat cctcttccagctgtgaaggtttcgatggactggctgaaacttaggcccagtgttttccag gaggcagtggttgatgaaagacggtacatatggccctggctgatctctcttctaaatagt ttccaacctcatgaagaagatctatccagtaataatgcaactccccttccagaagaattt gagttgcaaggattcctggctctgaggccctcattcaggaacttggatttttccaaaggc caccaggcaattacaggggataaagaagggcagcaacgtcggatacgtcagcagcgcctg atcttcacaggcaaatggattgctgataaccagccaaggttgattcaatgtgaaaatgag gtaggaaagctcttgtttgtgaccgaaatcccagagctcttactagaggaccctagtgaa gccaaagagagtctcgccttacaggagacatccatgacagagccgctgtgtgctgatggg agccctggacttaaatcagtgctgtcctctggcagaagcctgagcaacagctgtgatgca ggagaaaaaccaatggtcaccttcaaagagaatatcaagccccgggagatgaacagagaa caagggcggatctaccccccaaaggacatggcgagggagagacgggactttagcaaagga atagtagcaaataagaatgatgggaagaaggataacaataaaagaaagaatgagaccaag aaatgtggcctggataagatgcaggaagcaggaaagcagaatgtggcagttcaggtgaaa tcccagacagagatgaggaagactccagtatctgaagccaggaaaacacctgtaactcag actccaagtcaggccagcagttcccaattcatccctattcatcacccaggagccttccct ccccttcctagccggccaggatttcctcctccagcctatgttgtcccccctcctgtggct ttctccatgagcacggggtacaccttcccaagtggtgtttctgtcccaggaaccttcctc cagcccacagctcactcacctacaggaaaccaggtgcaaggtgggaaacagtcccacatt ccttacagccagcaacggccctctggaccagggccaatgacccagggacctcagcaaaca ccacctccttcccagcaacccctctcatctttaccagctcaggcagcagcacagtccgca agccagttacaggtccaagctctggctcagcagcagcagtcccccacgaaagttgtccag ggcctggggaagagcccaccacaccactctggattccagcagtatccacagacagactca tcaaagcagctctggaactcccctcaagtccaaggctccctggggaagatcatgtctgta aagcagccctattacctgcaggcccaggaccctctcaaactctttgaacagtctttacag cctcctgtgatgcaacagcaacctctggagaaaaaaatgaagcctttcccaatggagcca tataaccagaacccctcagaagtcaaggtgccagaatattactgggactcttcctatggc atgactgacaacagggtgatgacccagcagtcgaatatggaccgcagggggaagcggcag ggagtcttctgctctgagcaggatgctgtctccaggatgacctttgaggaccccaagagc tcccctctgcttcctccggacctgttaaagagtctggctgccttggaggaggaggaagag ttgattttctctaatcctcctgatctttacccagctctgctggggcctctcgcctctctt cctggacgaagcctctttaagtccctgctggaaaaaccatcagaattgatgtctcagtca tcatctttcctgtccctcagtggcttttctctaaatcaggaaagatatccgaacaacagc atgtttaatgaggtatatggaaaaaacatgaataccagcacaaaaacagaagtcacccct tcagctgcgcatcaggagacttcactgtattctctcttcgaagggactccatggtctcca tccattccagccagctcagatcattcaacaccagccagccagtctcctcactcctcaaac cccagcagcttgccaagctcccctccaacacataaccacaattctgttcctttctccaac ttcggacccattgggactccagacaacagagaccggagagtcacagaccgctggaaaaca gataagccagcaatgggagggtttggtctggactatctcccaacaacgtcatcctcttcg gagagtagctggcaccagtccagtgctcccagtggtacctgggcagtccaaggccctcct gccatggaggactcctcagctgtgcttatggagagcctgaagtccatctggtccagttcc atgatgcaccctggcccctcggccctggagcagctgttgatgcagcagaagcagaagcag cagcgcggacaaggcgcaatgaatcagccgcattga

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