Cyanistes caeruleus (blue tit): 111932577 Help Entry 111932577         CDS       T05602                                  Symbol TNR Name (RefSeq) LOW QUALITY PROTEIN: tenascin-R   KO K06252   tenascin Organism ccae  Cyanistes caeruleus (blue tit) Pathway ccae04510   Focal adhesion ccae04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:ccae00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111932577 (TNR)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     111932577 (TNR)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ccae00536]     111932577 (TNR) Glycosaminoglycan binding proteins [BR:ccae00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111932577 (TNR) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_TEN Ig_DSCAM-DSCAML_C EGF_Teneurin Pur_ac_phosph_N EGF_Tenascin Fn3_Dep-1_2nd FN3_Tor_3rd EGF_2 Lzipper-MIP1 EGF_alliinase TSC22 Motif Other DBs NCBI-GeneID:  111932577 NCBI-ProteinID:  XP_023787465 LinkDB All DBs Position 8 AA seq 1363 aa AA seqDB search MGTDGENLVLRNVVISFNLLLLGAVLKPFECRLEMTTEPAERTAVDEAGGLTNCSPPIKE QPMVFHHIYNINIPLDSCCSSMFKSSAEEVSSEDDRLTEYTEQTSDSESQVTFTHRINMP KQACKCSTSLPSLQELLSRIEMLEREVSILRDQCTSNCCQENAATGQLDYIPQCSGHGNF SLESCSCVCMEGWAGSNCSEPRCPRGCSSRGVCLEGQCICDNDYGGEDCSQLRCPAGCGS RGLCVDGECVCEEGFTGEDCSQLRCPRDCSGRGRXXXXXXXXXVNGTCECQEGFAGEDCA RLHCPNACSGRGLCRDGLCVCEEGFDGQDCSEVSPPENLRVTGISDSSIELVWDSPGAAT EYVVSYQPAVPGGTQLQQRVPGDWSSITIADLEPGVAYNVSIYAVISDIFSIPVTSKVMT NLATPQGLKFKTITETTAEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTVTTFNQTG LKPGEEYTVTIVALKEQARSPPTSDSVSTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDA ILLKYGLADGEGGRTTFRLQPPLSQYSLQALRPGARYHLAVSALRGANESQPAFAQFTTE IDAPKNLRVGSRTPASLELAWDNSEAEAHSYRVVYSTLAGEHYHEVLVPRDTGPTTRATL ADLVPGTEYGIGISAVMDSQQSVPATMNARTELDSPRDLLVTASTETSISLAWTKATGPI DHYRITFTPASGMASEVTVSQDESQLTLSELEPGTEYTISIIAERGRQQSLEATVDAFTG VRPISQLHFSQLTSSSVNVTWSDPSPPADRLILTYSPRDEEEAQQVTLDGTRRHTSLTGL QPSTEYLVSLVAVHGTISSEPVVGSITTGIDAPKDLRVGNVTQESMMVYWSAPIAAFDHY RISYRAAEGRTDSMAISRDATEYTLQDLQPATKYEIGVKSVRGREESELASITVYTAMDV PLGVTATNITPTEALLQWNPPLSEVESYVLILTRRAVSGETILVDGDKQEYQLTNLLPTT TYTVSMYATSGPLTSQTISTNFTTLLDPPTNLTASEVTRRSALLSWVPPMGEIENYVMTY RSTDGSRKELIVDAEDTWIRLEGLSETTEYTVHLQAAQNAMRSGLISTTFTTGGRVFANP QDCAQHLMNGDTLSGVYTISINGDLSQRVPVYCDMTTDGGGWIVFQRRQNGLTDFFRKWA DYRVGFGNLEDEFWLGLDNIHKITSQGRYELRIDMRDGQETAYAYYDKFSIGDSRSLYKL RIGDYNGTSGDSLSYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGES RHSQGINWYHWKGHEFSIPFVEMKMRPYNHRNISGRKRRSLQL NT seq 4092 nt NT seq  +upstreamnt  +downstreamnt atggggactgatggtgaaaacctggtcctgaggaatgtggtcatcagcttcaacttgctt ctgctgggcgctgtcctcaagccttttgagtgccggctggagatgacaacagagccagct gagaggacagcggtggatgaggcaggtggcctcaccaactgcagcccacctatcaaagag cagcccatggtcttccaccacatctacaacatcaacatcccactggacagctgctgctca tccatgttcaagtcttcggccgaggaggtgagttcagaagacgaccggctgacagagtac acggagcagacctccgacagcgagagccaggtcaccttcacccacaggataaacatgccc aagcaggcctgcaagtgctccacctccctcccatccctgcaggagctgctgagcaggatt gagatgctggagagggaggtctccatcctccgggaccaatgcacctccaattgctgccaa gaaaatgcagccacagggcagctggattacatcccgcagtgcagcggccacgggaatttc agcctggagtcgtgcagctgcgtgtgcatggagggctgggcaggcagcaactgctccgag ccccgctgcccccggggctgctccagccgcggcgtgtgcctggagggccagtgcatctgc gacaacgactacgggggcgaggactgctcgcagctccgctgccccgccggctgcggctcc cgcgggctctgcgtggacggcgagtgcgtgtgcgaggagggtttcaccggggaggattgc tcccagctgcgctgcccccgcgactgctcgggacggggccgcnnnnnnnnnnnnnnnnnn nnnnnnnnngtgaacggcacctgcgagtgccaggagggcttcgccggcgaggactgcgca aggctgcactgccccaacgcctgcagcggccggggactctgccgggatgggctctgcgtc tgcgaggaaggctttgacgggcaggactgctcagaagtgtctcctcctgaaaacctgcgg gtgacggggatcagcgacagctccatcgagctggtttgggacagccccggggcagccacc gagtacgtggtctcgtaccagcccgcggtgccagggggcacccagctccagcagagggtg cctggggactggagcagcatcaccatcgcggatctggagccaggtgttgcctacaatgtc agcatctatgcagtcatcagtgacatcttcagcatccccgttacctccaaggtgatgact aacctcgccacaccgcaggggctgaagttcaagaccatcacagagacgacagcagaagtg cagtgggagcccttctccttccccttcgacggctgggagatcagtttcattcccaagaat aatgagggtggtgtgattgcccagctccccagcactgtcaccaccttcaaccagacgggg ctgaagccaggagaagagtacactgtcaccattgtggccctgaaggaacaagccagaagc cctcccacctctgacagcgtctcaaccctcatcgatggcccgacgcagatcctggtgcgg gatgtctccgacacggtggccttcgtggagtggaccccgccgcgtgccaaggtggacgcc atcctgctgaagtacgggctggcggatggggagggcgggaggaccaccttccgcctgcag ccccccctcagccagtactccctgcaggccctgcgccctggcgcccgctaccatctcgcc gtcagcgccctccggggtgccaacgagagccagccagccttcgcacagttcaccacagag attgatgcccccaagaacctgcgagtgggctcgcggacccctgccagcctcgagctcgct tgggacaacagcgaggccgaggcacacagctacagggtagtctacagcaccctggccggg gagcactaccacgaggtcctggtgccgcgcgacaccggtcccaccacccgggccaccctc gcagatctggtgccaggaacggagtatggcattgggatttcagccgtgatggacagccag cagagtgtgccagcgaccatgaatgccaggactgagcttgacagcccccgggacctcctg gtgacagcctctactgagacgtccatctcactggcttggaccaaagccacgggtcccatc gaccactaccgcatcaccttcacccctgcctcaggaatggcctctgaagtgacagtgtcc caggacgagtcacagctcaccctctcagagctggagcctggtacagagtacaccatctcc atcatcgctgagaggggacggcagcagagtctggaggccaccgtggatgccttcacaggt gttcggcccatctcacagctacacttctcccagctgacatcctccagtgtgaatgtcaca tggagtgacccatccccaccagcagaccgcctcatcctcacctacagcccccgggatgag gaggaggcacagcaggtcacactcgatggcacccgcaggcacaccagcctgacgggcttg cagccatccaccgagtatctggtgtcactggtggccgtgcacggcaccatcagctctgag cctgtcgtgggctccatcacaacagggattgatgcaccaaaggacctcagggtgggcaac gtcacccaggagtccatgatggtctactggagtgctcccattgctgcctttgaccactat aggatatcctaccgtgctgccgaagggaggacagacagtatggccatctccagggatgcc accgagtacaccctccaagacctgcagccggccaccaagtatgagatcggagtgaagagc gtgcggggccgggaggagagcgagctggcctccatcactgtgtacacagccatggatgtc cccctgggggtcacagccaccaacatcactcccaccgaggcgctgctgcagtggaacccg ccgctgtcagaggtggaaagctatgtcctcatccttacgcgtcgtgcagtttcaggagaa acaattcttgtggatggagacaagcaggagtaccagctgaccaacctgctgcccactacc acctacacagtctctatgtatgccaccagtgggcctctcaccagccagaccatcagcacc aacttcactactcttttggatcctccaacaaatctgacagccagtgaagtcacacgacgg agcgccctgctgtcctgggttcctcccatgggagagatcgagaattatgtcatgacctac agatccaccgatggcagccggaaggagctgattgtggatgctgaggacacgtggatccgt ctggagggcctttctgagaccacagagtacacggtgcacctgcaagctgcccaaaacgcc atgcggagcggcctcatctcaaccaccttcaccacaggaggacgtgtctttgctaaccct caggactgcgcccagcacctgatgaatggagacacgctgagcggggtctacaccatctcc atcaacggggacctcagccagcgggtgccggtgtactgcgacatgaccaccgacggaggt ggctggattgtcttccagcggcggcagaacgggctgactgatttcttccggaaatgggca gattaccgggttggctttggaaacttggaggatgagttttggctgggcttggacaacatc cacaagatcacgtcccaagggcgctatgagctgcgaatagacatgagggatggtcaggaa acagcatatgcctactatgacaagttctccattggtgactcccggagcctctacaaactg cgcattggggactacaatggcacttcaggagactccctctcctatcaccagggacgcccc ttctccaccaaggacagggacaatgatgttgctgtgaccaactgtgccatgtcctacaaa ggagcctggtggtataagaactgccaccgcaccaacctcaacggcaagtacggagagtcc cggcacagtcagggtattaactggtaccactggaaaggccatgagttctccatccccttt gtggaaatgaagatgcgaccttacaaccaccgtaacatctctgggaggaagcgacggtcc ctacagctctga

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