KEGG   Cyanistes caeruleus (blue tit): 111932581
Entry
111932581         CDS       T05602                                 
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2 isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
ccae  Cyanistes caeruleus (blue tit)
Pathway
ccae04115  p53 signaling pathway
ccae04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111932581 (COP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    111932581 (COP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccae04121]
    111932581 (COP1)
Enzymes [BR:ccae01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111932581 (COP1)
Ubiquitin system [BR:ccae04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111932581 (COP1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111932581 (COP1)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EIPR1 WDR55 zf-C3HC4_2 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4 Beta-prop_CAF1B_HIR1 Beta-prop_EML zf-RING_2 Beta-prop_DCAF4 zf-RING_UBOX Beta-prop_WDR90_POC16_2nd zf-RING_5 zf-C3HC4_3 WD40_RFWD3 zf-C3HC4_4 Beta-prop_WDR35_TULP_N RING_XB3-XBAT31 Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st Beta-prop_DCAF12 zf-rbx1 Beta-prop_IFT122_1st zf_C2H2_10 zf-RING_4 zf-RING_10 zf-RING_11 Prok-RING_4
Other DBs
NCBI-GeneID: 111932581
NCBI-ProteinID: XP_023787466
LinkDB
Position
8
AA seq 621 aa
MQGNPGKEVSPGVRGCSGCTWAVKRSPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRC
PKCNYVVDNIDHLYPNFLVNELILKQKQRSEEKRLKLDHSVSSTNGHRWQIIQDLLGTDQ
DNLDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLE
EDIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYN
STLASRRKRLTAHFEDLEQCYFSTRMTRVSDDSRTTSQLDEFQECLSKFTRYNSVRPLAT
LSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN
SKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLA
SGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQ
PIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNFVGLAS
NGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPD
GESNVLIAANSQGTIKVLELV
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgcaaggtaaccccgggaaagaagtgtctccaggagtcagaggctgctctggatgtacc
tgggcagtgaaaagaagccccatctgttttgatatgattgaagaagcctacatgacgaaa
tgtggacacagcttctgctataaatgtattcaccagagcctggaggacaataacagatgt
cccaaatgcaactatgttgtggacaacatagatcatctttatcccaacttcttagttaat
gaattaattctcaaacagaagcaaagatctgaggagaaaagactcaaactggaccattca
gtgagtagcaccaatggccacaggtggcagataattcaagatttgttgggaactgaccaa
gacaatcttgacttagccaatgtcaacctgatgctggagctgctggtgcaaaagaagaag
cagttggaagcagaatcccatgctgcccagctacagatccttatggaatttcttaaagtt
gccaggagaaacaaacgagagcaattggagcagatccagaaggagctaagtgttctggaa
gaagatattaaacgagtagaggagatgagtggcctgtactccccggtcagtgaggacagc
acagtgccacagtttgaagctccctcaccttcacacagtagtattattgactccaccgag
tatagccagcctccaggcttcagtggcagttctcagaccaaaaagcagccgtggtataac
agcacgctggcctcgcgacgcaagcgcctcactgctcattttgaggaccttgagcagtgc
tatttttccaccaggatgactcgggtctcagatgacagcagaaccaccagccagctggat
gagtttcaggagtgtctatccaagttcacacgctacaattctgtccgaccgctggcaacg
ctgtcctacgctagtgacctctacaatggctccagcatagtgtccagtattgagttcgac
cgagactgtgactactttgccatcgctggagtgacaaagaagattaaagtctatgagtat
ggtacagtcattcaggatgcagtggatattcactaccctgagaatgaaatgacctgtaat
tccaaaatcagctgtatcagctggagtagttaccacaagaacctgctagccagcagtgac
tatgaaggcaccgtcatcctttgggatggattcacaggacagagatccaaggtctaccag
gagcatgagaaaaggtgctggagcgttgactttaacctgatggaccctaagctattggct
tcaggctctgatgatgccaaagtgaaactgtggtctaccaacttggacaactcagtcgca
agcattgaggccaaggctaacgtgtgttgtgtcaaattcagcccatcttctaggtatcac
ctagcttttggctgtgcagatcactgtgttcactactacgaccttcgcaacactaaacag
cccatcatggtgttcaaagggcatcgcaaggctgtctcctatgcaaaatttgtgagcggg
gaggaaatcgtctctgcgtcaacagacagccagctgaagctgtggaacgtagggaagcct
cactgcttgcgctccttcaagggtcacatcaacgagaagaacttcgtagggcttgcatcc
aatggagactacattgcctgtggaagtgaaaataattccctttacttatactataagggc
ctctcgaagacactgctgacattcaagtttgatacagtcaaaagtgtcctggacaaggac
cggaaagaagatgacacaaatgagtttgtgagcgctgtgtgctggagggcacttccagat
ggggagtccaacgtgcttattgctgctaacagtcagggtacaattaaggtactggagctg
gtatga

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