Cyanistes caeruleus (blue tit): 111932724
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Entry
111932724 CDS
T05602
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111932724 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccae04090
]
111932724 (VCAM1)
04091 Lectins [BR:
ccae04091
]
111932724 (VCAM1)
CD molecules [BR:
ccae04090
]
Proteins
111932724 (VCAM1)
Lectins [BR:
ccae04091
]
I-type lectins (Siglecs)
111932724 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
C2-set
Ig_6
C1-set
ICAM1_3_5_D2
Motif
Other DBs
NCBI-GeneID:
111932724
NCBI-ProteinID:
XP_023787717
LinkDB
All DBs
Position
8
AA seq
466 aa
AA seq
DB search
MFLMAEERRKDVVNREVTDLQMYWTAAAVKAFEMEIIPAERIVAQIGDMLILTCNTTGCA
SPNFSWRTQMDSPLGGKVSNHRTYSTLTMNPVSIVNSHSYLCTVICDDGEKKEKKEKSVK
VELYSFPSDPIIEISPSLVAGEQATVICRIPDVYPSDHLEVLLKKDEHVLHREDFQDDDS
MNLETKIVTYTFHPMAEDIGKEITCVARLPIADMDFEPKERTSSQMQIVILNANFGPQNT
TITASPSNLPMKGDSLNLTCVTQSNPPAQIVWSKRSAEESIQHLIKNNVLSIPHVHFSDS
GQYICEVINLVTNKTDKATVDIIIQGAPVITKLSIEPSTTVKEGENVSIQCSAESNPPPK
IILRRKPDNANMGPYSSRRILLPSVMFQNAGDYECMAENEFGNSRREITLNVKSRLEEPV
QMIPLIIAFSSVAAVVVPAVAILIYVSRQAKVNGSYSLVKALRLKV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcatggctgaagagaggaggaaggacgtggtaaacagggaagtgactgaccta
caaatgtattggacagctgctgctgttaaagcttttgaaatggaaattatacctgctgag
agaattgtggcacagattggagacatgctcatactcacatgcaatactactggctgtgca
tcaccaaatttttcctggagaacacagatggacagcccccttggaggaaaagtcagcaac
cacaggacatattctacattgactatgaatccagttagcattgtgaattctcattcttat
ctttgtactgtcatatgtgatgatggagagaaaaaggagaaaaaggagaagagtgtcaaa
gttgaactttactctttccccagtgatcctatcattgagatcagcccatccttagttgct
ggagaacaagccactgtcatctgtagaattcctgatgtgtatccttctgatcacctggaa
gttcttctaaagaaagatgaacatgttcttcatagggaagattttcaggacgatgacagc
atgaatttagagaccaaaattgtgacatacacatttcatcccatggctgaagatattggg
aaagagatcacctgtgtggccaggttaccaattgctgatatggattttgaacccaaagaa
agaacatcttctcagatgcaaattgtaatacttaatgcaaattttggtccacaaaatact
accattactgcatctccaagcaacttgccaatgaaaggagactctctgaacctcacttgt
gtgactcagagtaacccgccagcacaaatagtttggagtaaacgttcggctgaagaaagc
attcagcatctgataaaaaacaatgttctttctattccccatgtccatttcagtgattcg
ggacagtacatctgtgaagtaattaatctggtaactaataaaacagacaaagcaactgtg
gacattattatacaaggtgccccagtcattacaaaactctccattgaaccttctacaaca
gttaaagaaggggaaaatgtttccatacaatgttctgctgagagtaaccctcctcccaag
attattttaaggagaaaacctgacaatgcaaacatggggccttacagtagcaggcgtatt
cttcttccatcggtgatgttccagaatgcaggagactatgaatgtatggcagaaaatgag
tttgggaacagtagaagggaaatcacactcaatgtgaaatcaagattggaagaaccagtg
cagatgataccattgattatcgcattctcatctgtagcagcagtagtggtacctgcagtt
gcaattttgatctacgtgtcaagacaagcaaaggtcaatggatcctacagtcttgtaaaa
gcactcaggttgaaagtctga
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