Cyanistes caeruleus (blue tit): 111932906 Help Entry 111932906         CDS       T05602                                  Symbol PTCH2 Name (RefSeq) protein patched homolog 2   KO K11101   patched 2 Organism ccae  Cyanistes caeruleus (blue tit) Pathway ccae04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:ccae00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     111932906 (PTCH2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sterol-sensing TRA2_N Patched MMPL Motif Other DBs NCBI-GeneID:  111932906 NCBI-ProteinID:  XP_023787978 LinkDB All DBs Position 8 AA seq 1272 aa AA seqDB search MVPSTAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKKDGDNILTQEALQLHLEAALAAS KVQVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLFPCVILTPLDCFWEGSKLQGGSA YLPGRPDIQWSNLDPLQLMEELGQFTSLEGFKELLDKAEVGQAYMERPCLDPRDPQCPPS APNKQSQQSPDIPAELSGGCHGFSRKFMRWQQELILGGTTKDSQGKLLRAEALQTMFLLM SPRQLYEHFKDDYEIHDISWSEEKAGAILEAWQRKFVELAQDSIPPNATQSVHAFSTTTL NDIMKSFSDVSVIRVAGGYLLMLAYACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGL CSLLGISFNAATTQVLPFLALGIGVDDMFLLAHAFTETSQHIPFKERTGECLKRTGTSVA LTSVSNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAMVLFVFPAILSLDLHRREKRRLD ILCCFYSPCSSRVIQIQPQELADANDNHACHPSPYGHPGVATSTQITTTVQAFTRCDPSG HHIVTVLPPTSQVCTSPAILLPHTDPLGSQVFSPSSSTRDLLSQLDEAKSGRECVPLPFC RWSLADFAREKYAPLLLRTRTKVVVVVLFLALLGLSLYGTTMVHDGLYLTDIVPRDTKAH AFISAQFKYFSFYNMFIVTKGGFHYPGAQAALLSLHQAFSTVKYVVREGNRDLPKMWLHY FQDWLRGLQATFDRDWQAGRITHDSYRNGSEDGALAYKLLIQTGNKKEPFNFNQLTTRRL VDENGIIPPDTFYICLTVWASNDPLGFAASQANFYPPPPEWIHDKYDTTGENLRIPAAQP LEFAQFPFYLSGLRRTSDFVEAIESVRAICREAAQRHGVLSYPSGYPFLFWEQYIGLRHW FLLAISILLACTFLVCALLLLNPWTAGIIVSILAMMAVELFGIMGLMGIKLSAIPVVILI ASVGIGVEFTVHVALGFLTAAGSRNVRSAAALEHTFAPVMDGAVSTLLGVLMLAGSEFDF IMRYFFAVLTILTLLGLLNGLVLLPVLLSVIGPPPEASQVDNGPCLPPPESAPQCLGPGG MYVRRTPAWPATFPEPSDTEHYTESVGPGSPRGPFIVPPAPAHILLEAGKDPSFPRITVL KPYKDSLEVQGKKEASGPQPATPLPFGEPCTMLPREHPQSGPPGTRPAPPAALPTYSTHL QGPAGSYTTVTATASVTVALHPTLPGSYPNFSPEGFTSSERDCLDEPSTSSTAVPNTFEM QNMGHHGAGARR NT seq 3819 nt NT seq  +upstreamnt  +downstreamnt atggttccctccacagcgggcagccgggtgagccaggagctgcgctacaccaaggagaag ttgggcgaggagtcggtgtacacctcccagatgttgatccagaccccgaagaaggatggt gataacatcctgacgcaggaggccctgcagctccacctcgaggcggccttggccgccagc aaggttcaagtctcactgtacggaaaatcgtgggatttgaacaagatctgctacaagtcg ggtgtccccatcatcgagaacggcatgatcgagaggatgatagagaagctgttcccctgt gtgatcctgacaccactggactgtttctgggaaggctccaagctgcagggaggatcagcc tatctcccgggccgcccggacatccagtggagcaacctggaccctctgcagctgatggag gagctggggcaattcacatccctggaaggcttcaaagagctgctagacaaggcagaggtg ggacaggcttacatggagcggccctgtctggacccccgggatccccaatgtccccccagc gcccccaacaagcagagccagcagagccccgacatcccggccgaactctcggggggctgc cacggcttctccaggaagttcatgcgctggcagcaggagctgattttgggcggcacaacc aaagactcccagggcaagctgctacgcgccgaggccctgcagaccatgttcctcctcatg agtccccggcagctctatgagcacttcaaggatgactatgagatccatgatatcagctgg agcgaggaaaaggcaggagccatcctggaggcctggcagaggaaattcgtggagctggca caggactccatccctcccaacgccacacagagtgtccatgctttctctaccaccacgctc aacgacatcatgaagtccttctctgacgtcagcgtcatccgggtggctgggggctacctc ctcatgctggcctacgcctgtgtcaccatgctgcggtgggactgctccaagtcccaaggg gctgtgggcctggcaggggtcctgcttgtggctctctccgtcgcctctggtctggggctc tgctcactgctgggcatctccttcaatgcagccaccacccaggtcctacccttcctggcc ctcggcattggggtggatgacatgttcctcttggctcacgccttcactgagacgagccag cacatacccttcaaggagcggacgggtgagtgtctgaagcggacagggaccagtgtggct ctcacctctgtcagcaacatgatcgcctttttcatggcagccctggtgcccatccctgcc ctgcgcgccttctccctccaggctgcagtggtggttgtgttcaacttcgccatggtgctc tttgttttccctgctatcctgagcctggacctgcaccgccgggagaagcgccggctcgac atcctctgctgcttctacagcccttgctcctcacgggtcatccagatccagccccaagag cttgccgacgccaacgacaaccatgcctgtcacccgtctccttatgggcaccctggtgtg gccaccagcacccagatcaccaccactgtgcaagccttcacccggtgtgacccctcgggc caccacattgtcaccgtcctgccacccacctcccaagtgtgcacctcacctgccatcctc ctgccccacaccgaccccttgggctcgcaggtcttctccccatccagctccactcgggat ctgctgtcccagctggatgaggccaagagtgggcgggagtgtgtccccctgcccttctgc cgctggagccttgctgattttgcccgggagaagtacgccccactccttctgcgcacccgg accaaggtggtagtggtggtgctgttcctggcactgctggggctgagcctctatggcacc accatggtacatgatggcctctacctgactgacatcgtgccacgggacaccaaggcacac gccttcatctcagcccagttcaagtacttctccttctacaacatgttcattgtcactaaa ggtggcttccactacccgggtgcccaggctgccctgctgagcctgcaccaggccttcagc accgtcaagtacgtggtgcgggagggcaaccgcgacctgcctaaaatgtggctccattac ttccaggactggctgcgagggctccaggccacctttgacagggactggcaggctgggcgc atcacccatgacagctaccgcaatggctccgaggatggggcactggcatacaagctcctc atccagactggcaacaagaaggagcccttcaacttcaatcagctgaccacacggcgactg gtggacgagaatggcatcatcccccccgacaccttctacatctgcctgacggtgtgggcc agcaacgatcccctgggctttgctgcctcccaggccaacttctaccccccaccccctgag tggattcatgacaagtacgacaccacgggcgagaacctgcgaatcccagcagcccagccg ctggagttcgcccagttccctttctacctgagcgggctgcgtcgcacatctgactttgtg gaggcgattgagagcgtacgggccatctgccgggaggctgcccagcgccacggcgtgctg agctaccccagcggctaccccttcctcttctgggagcagtacatcggcctgcggcactgg ttcctgctggccatcagcatcctgctggcctgcaccttcctcgtctgtgccttgctgctg ctcaacccctggactgccggcatcatcgtctccatcctggccatgatggctgtggaattg tttggcatcatggggctgatgggcatcaagctgagcgccatccctgtggtcatcctcatt gcctcggtgggcatcggtgtggagtttactgtccacgtggccctgggcttcctgacagct gcagggagcaggaacgtgcgctcagccgcagcactggagcacacttttgcccctgtgatg gatggtgctgtttccaccctcctgggtgtcctcatgctggctggctctgagtttgatttc atcatgaggtatttctttgcggtgctgaccatcctgacgctgctggggctgctcaacggg ctggtgctgctacctgtcctgctctctgtcattgggccaccccctgaggcatcccaggtg gataatggcccctgcctacccccaccagagtcggcaccccagtgtctgggccctggggga atgtatgtccggcgcactccagcctggcccgccaccttccctgagccctctgacacggag cactacacagagagcgtagggccaggcagcccacggggacccttcattgtgccccctgcc ccggcacacatcctactggaggctggcaaggaccccagcttccctcgcatcactgttctg aagccctacaaggacagcctggaggttcagggaaagaaagaggcttctggccctcagcct gccacccccctgcccttcggggagccgtgcaccatgctgccccgagagcacccgcagtcc ggcccaccaggcacccggccagccccccctgcagccctgcccacctacagcacccacctg cagggtcctgccggcagctacaccaccgtcacggccactgcctcagtgactgtggccctg caccccacactgcctggctcctaccccaacttcagccccgagggcttcaccagcagtgag cgggactgcctggacgagccaagcaccagcagcaccgctgtgcccaacacctttgagatg cagaacatgggacaccacggggcaggtgcccggcgctag

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