KEGG   Cyanistes caeruleus (blue tit): 111933540
Entry
111933540         CDS       T05602                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
ccae  Cyanistes caeruleus (blue tit)
Pathway
ccae04382  Cornified envelope formation
ccae04510  Focal adhesion
ccae04512  ECM-receptor interaction
ccae04518  Integrin signaling
ccae04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    111933540 (COL4A4)
   04518 Integrin signaling
    111933540 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    111933540 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    111933540 (COL4A4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    111933540 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccae04147]
    111933540 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:ccae00536]
    111933540 (COL4A4)
Exosome [BR:ccae04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   111933540 (COL4A4)
Glycosaminoglycan binding proteins [BR:ccae00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   111933540 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 111933540
NCBI-ProteinID: XP_023788979
LinkDB
Position
9
AA seq 1684 aa
MALTKDSFERIKWLITAAWWLLIVFSGQGIDGGGYAYIDPCGGQDCSVCRCFPEKGSRGQ
PGDLGAQGPIGALGSTGPAGLPGEKGQRGENGRPGPAGEKGDKGPTGVPGFPGLDGVPGL
PGMEGPRGKHGLDGCNGSRGDPGFPGENGYMGPRGPYGIPGQKGEKGNSVYISHFGKGLP
GERGDPGPPGMPGPRGSRGTTGPSGYPGHPGLPGIPGYPGLPGEQGNPGIGVDGQKGEPG
DIGLPGPPGLPLLVGPPGAQLFKGQKGQKGLPGVTGDRGPRGPKGILGRGEKGEKGLPGF
PGLQGHPGSYGPAGFPGMKGETGFAGFPGQPGYPGIQGDPGEKGPPGPPGAVGTPLPPVK
GPRGDPGFPGPVGEMGSVGPIGPSGLVGRPGYDGTSLPGLPGVSGEPGPQGFQGDPGLPG
IGELIPGRPGFPGPPGLPGQPGRQGLPGLPSVICTDRGIPGEPGAKGQIGLPGRKGAKGE
KGSQGLCSCSAGPPGPRGVQGPPGTQGRKGQMGYPGRHGEKGDPGLSGAVGPPGLPGTPG
SAGQHGEKGERGDPGRVRIKGLKGERGPAGLPGFPGQRGLDGRDGELGLPGEKGAEGDSG
VAIPGEKGFPGLPGPPGVKGQMGLPGLGLPGPPGARGSPGDLGDTGDIGPPGPKGQKGET
VCITSPYPGNPGPPGFKGVQGQKGLKGLPGHPGPNGFDGQKGHRGRPGAGIPGPEGFRGT
AGDPGDEGERGATIDGKNGLPGPPGTDGQKGLPGDTTYGPPGIPGNRGLPGPPGAQGARG
NPGIPGLQGQPGTPGFPGAKGFRGPEGDIGAPGCPGFPGSPCVPGLPGPPGLRGVMGLPG
PQGLPGFKGQRGDRGLAGSPGIKGLKGSLGSRGLPGPPGTRGPPGLPGNNGPIGFPGETG
SKGIQGPQGFPGLPGIQGPMGILGVKGEEGKMGLPGPSGECGDMGIKGERGPPGDSGCVN
LRLEKGQMGDPGYPGEHGLRGERGEKGNTGFRGTRGFPGKNGVPGLPGDQGDTGVMGFPG
SRGLPGPKGLQGITGFQGEPGDQGDTGLPGNPGYPGLTGPKGCKGKRGDPTPLLGTHGQK
GPPGDPGLPGLRGFPGEKGLPGIQGQPGRPGSKGDPGYPGLPGLPGATGPQGLPGEPGEK
GKPGILGPPGLQGLPGFQGRKGLPGLPGLDGLDGLKGQKGSAGAPGQSETGPPGYSGEIG
PKGDRGEPGWPGISIPGSPGERGFPGFPGRRGPVGPTGPMGRSPDSASPGPPGDQGLPGL
DGIRGIKTKNTNFYHKKKTIFVRGDPGDTGIRGAPGNPGPRGQQGAKGPPGSQGREGPKG
PMGVHGPQGPPGASGQPGDQGFPGRPGPRGPTGFIGDPGEPGKIDDSCPTIPGPPGEAGQ
RGEDGSAGLPGPIGHPGPQGIKGEEGSCGLPGQDGLPGAPGPPGDQGSRGEQGYAGPQGP
PGQTGVPGQPGPQIRSASGFLLVLHSQSDREPLCPQGMPKLWTGYSLLYLEGQEKAHNQD
LGLAGSCLPVFSTMPFAYCNINQVCYYASRNDKSYWLSSAAPLPMAPLSEEEIRPYISRC
AVCEAPAQAVALHSQDQTIPPCPLNWRSLWIGYSFLMHTGSGDQGGGQSLMSPGSCLEDF
RSAPFIECQGQRGTCQFFANEYSFWLTTVMPELQFASAPLSGTLKEGQEQRKKISRCQVC
LKHG
NT seq 5055 nt   +upstreamnt  +downstreamnt
atggcattaacaaaggattcatttgaacggattaagtggcttatcacagctgcctggtgg
ctgctgattgttttttcaggtcaaggaattgatgggggaggatatgcttatattgatcca
tgtgggggacaggattgttcagtttgtcggtgctttccagagaaaggatcaaggggtcag
cctggtgatctgggagctcaaggtccaattggggccttgggatctacaggaccagctggt
ctgccaggggagaaaggacagagaggtgagaatgggaggcctgggccagctggagaaaaa
ggtgataagggcccaactggagtcccaggatttcctggtttagatggtgttcctggcctc
ccaggaatggaaggacccagaggcaagcatggtttggatggctgcaatggctcaagggga
gacccaggatttccaggagaaaacggttatatgggaccaagaggtccttatggaattcca
gggcagaaaggagaaaaaggaaattcagtgtatatttcacattttggaaaaggacttcca
ggagagagaggtgatcctggaccccctggcatgcctggacctagagggtcaagaggtaca
acgggcccatctggatacccaggccatccaggcttgcctggtattccaggttaccctggt
ttaccaggtgaacagggaaatccagggattggagtggatggacaaaagggggagccgggc
gacatcggactgcctgggccgcctgggttaccgctgttagttggacctcctggagctcag
ctgttcaaaggacaaaagggccaaaaaggattacctggggtaacaggagacagagggcca
cgtggacccaaaggcatacttgggagaggagaaaagggtgaaaaaggccttcctggattc
cctggattgcagggtcatcctggttcttatggacctgcaggttttcctggaatgaagggt
gaaacaggatttgctggttttcctggacaacctggctatccaggcatacagggggatcca
ggagagaaagggcccccaggtcctcctggagctgttggaactccactgcctcctgtaaaa
ggcccacgaggagatcctggatttccaggtcctgttggtgaaatggggtcagttggacca
attggtccttcaggccttgtaggaagaccaggatatgatggaacaagtcttcctggcctg
ccaggagtaagtggggaaccaggacctcaaggttttcaaggggaccctggtttgcctgga
ataggtgaattaatcccaggaagaccaggatttcctggaccaccaggcctaccagggcag
ccaggaagacaaggcttacctggactacccagtgtaatctgtactgatagagggatccct
ggagaacctggagcaaaaggtcagataggccttccaggaagaaaaggtgcaaaaggagag
aagggaagtcaaggcctctgctcatgtagtgctggtcctcctggtccccgtggtgtgcaa
ggacctccaggtactcaaggaaggaaaggacaaatgggataccctggaagacatggagaa
aagggtgacccaggcttatctggtgcagtgggaccaccagggctccctgggactcctggt
tctgctggacagcatggggaaaaaggagagaggggtgatccaggaagagttagaataaaa
ggattaaaaggtgaaagaggacctgctgggcttccaggatttccaggccaaagaggtctt
gatggcagagatggggaattaggattaccaggggaaaaaggagctgagggtgattctgga
gtagcaattccgggtgagaaaggattccctgggctcccaggacctcctggggtaaaaggc
cagatgggattgcctggtttggggcttcctgggcctccaggagccagaggtagccccgga
gaccttggtgatacgggtgatattgggccacctggtccaaaaggccagaaaggtgaaact
gtctgcattacatcaccatatcctggaaatccaggtcccccgggttttaaaggtgttcaa
ggacaaaagggtttaaaaggactccctgggcatcctggaccaaatggctttgatgggcaa
aaaggccatcgaggaaggccaggagcaggaatccctgggccagaaggctttagaggcaca
gctggtgatcctggtgatgaaggtgaaagaggagctacaattgatggcaaaaatggcctt
ccaggtccacctggcacagatggtcagaagggtctcccaggtgacaccacatatggccct
ccaggaatcccaggcaacaggggactgccaggaccccctggtgctcagggagcaaggggc
aatccaggcattcctggacttcaaggacaacctggcaccccaggatttccaggtgccaaa
ggttttagaggcccagaaggtgatataggagcaccaggctgtccaggcttccctggctca
ccatgtgtcccaggcttaccaggaccacctggactcagaggtgtcatgggcctgccagga
cctcaaggcttgccaggctttaaaggtcagaggggagacaggggcctggctgggtcacct
ggaatcaaaggtctcaaaggctctctgggctcacgaggtctcccaggtcctccaggcaca
cgaggtcccccagggcttccaggcaataatggacccattggcttcccaggagaaacagga
agcaaaggcattcaaggaccccagggattcccaggacttccaggaatacaaggcccaatg
ggaatccttggtgtaaaaggtgaagaaggaaaaatgggtctacctgggcctagtggagaa
tgtggagatatgggaataaaaggtgaaagggggccaccaggagacagcggctgtgttaac
ctccgtcttgagaaaggacaaatgggggacccagggtatcctggtgagcatggattgaga
ggtgaaagaggtgaaaaaggtaatactggtttcagaggaacacgaggatttccagggaag
aacggtgttccaggactgccaggtgaccaaggagacactggagtgatggggtttccagga
tcacggggtttgcctggaccaaagggccttcaaggaattacaggttttcaaggagaacca
ggtgaccagggtgatactggcttaccaggaaacccaggatatccaggactgactggcccc
aaaggatgtaaaggcaagagaggtgacccaactcctctgcttggcacacacggtcagaaa
gggcctccgggagatccaggattgccaggactccgtggatttccaggggagaagggttta
ccaggtatccaaggacagcctggaagaccaggatccaagggtgaccctggatatccaggg
ctacctggattaccaggggctacaggtcctcaaggattgccaggagaacctggagaaaaa
gggaaacctggaattttgggacctccaggattgcaagggttgcctggattccaaggcaga
aaaggtcttcctggactgcctggactggatggcttggatggactaaaaggtcaaaagggt
tctgcaggagctccaggtcagagtgagacagggcccccaggatactcaggagaaattgga
ccaaaaggagacagaggtgaacctggatggcctggtatttctattccaggctcccctgga
gaaaggggatttccaggatttccaggtagaagaggacctgttggacccactggacctatg
ggaagatctcctgatagtgcttcccctggtcctccaggtgatcaaggattacctggttta
gacggcatcagaggtattaaaactaaaaataccaacttttatcataaaaaaaaaacaatc
tttgtgcgaggagatccaggtgatactggcattcgaggggcaccaggtaatcctgggcca
cgaggacaacagggagccaaaggccctccagggagccaaggaagagaaggcccaaagggt
cctatgggggtccatggcccacagggtccacctggtgcttcaggacaaccaggagaccaa
ggttttccaggaagacctggtcccagaggtcccacaggtttcataggtgaccccggtgag
ccaggaaagatagatgattcatgccctacaatcccagggcctcctggggaagcagggcaa
agaggagaggatggctctgcaggattaccagggccaataggccaccctggaccccaaggc
ataaaaggtgaagaaggatcgtgtggcctgccaggtcaagatgggttacctggggcacct
ggaccaccaggtgaccaagggagccgaggagagcaaggatatgctgggccacaaggtcca
cctggccagactggtgttccaggacaaccaggcccccagattagatctgcaagtggattc
ttgcttgtccttcacagtcagtcagacagagaaccactctgcccacaggggatgccaaag
ttatggactggctatagtctgctgtacctggaaggacaagagaaagcccataaccaagat
ctcggtctggcaggatcctgcctgcctgtgtttagtaccatgccatttgcctactgcaac
atcaaccaggtgtgttactatgccagccgcaatgacaagtcctactggctgtccagcgct
gctccgctgccgatggcgccgctgtccgaggaggagatccggccgtacatcagcagatgt
gctgtgtgtgaggccccagcacaggcagtggcactgcacagccaggaccagaccattcct
ccctgcccactcaactggaggagcctttggataggatactcttttttgatgcacactgga
tctggtgaccagggtggtggacagtcccttatgtcacccggaagctgcctggaagacttc
agatcagcaccattcattgagtgccagggccagcgaggaacgtgtcagttctttgctaat
gaatacagtttctggctgaccaccgtgatgcctgagctgcagtttgcatcagcccccctg
tcagggacgcttaaagaaggacaggagcagaggaaaaaaatcagtcgatgccaggtatgc
ctgaagcacggctaa

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