Cyanistes caeruleus (blue tit): 111933583
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Entry
111933583 CDS
T05602
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111933583 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111933583 (DHX36)
03012 Translation factors [BR:
ccae03012
]
111933583 (DHX36)
Enzymes [BR:
ccae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111933583 (DHX36)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111933583 (DHX36)
Translation factors [BR:
ccae03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111933583 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
Sir1
NACHT
AAA_23
Motif
Other DBs
NCBI-GeneID:
111933583
NCBI-ProteinID:
XP_023789015
LinkDB
All DBs
Position
9
AA seq
1020 aa
AA seq
DB search
GAAPGRAVPLKGREIGLWYARKQGQKSRDADRQQRAVVRMDERREEQIVQLLNSVQTKND
KEQEAMSWWSGDEEGPAPEQPAKVKPHAVKAPVRQRPAWEKTSLDLDVEYLCEKTEQDAD
LDEQLKEDLMKKRSDPRYIEMQRFREKLPSYGMKEELVKLINSNRVTVISGETGCGKTTQ
VTQFILDDHIERGLGSTCRIVCTQPRRISAISVSAPSQCSALSPVCCKEPVCQCALLRYS
RDVRPQSTGTAASSFPHSSSWVLSVILMDLGSANGREEKRCFSRHFFVIYRPEFVKYGRE
LRSSYCVSFSRLPRKQGSILYCTTGIVLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMS
IIKDLLNIRLDLKVILMSATLNAEKFSEYFDHCPMIHIPGFTFPVVEYLLEDVIEKLRYT
PEKMDRRTHWRKGFMQGHVSRPEKEEKEEIYRQQWPGYLRQLQGRYSASTIDALEMMDDD
KVDLDLVAALIRHIVLEEEDGAILVFLPGWDNISTLHEILMSQVMFKSDRFIIIPLHSLM
PTVNQTQVFKKTLPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAA
EWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILKL
GGIANFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILF
GALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELSKNSKSDHLTVVNAFTGWEE
ARSCGFRNEKDYCWEYFLSSNTMQMLHNMKGQFAEHLLAAGFVNSRNPKDPKSNTNSGNE
KLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGSVNIHPKSVNVEETEFHYNWLVY
HLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIAVDEWIVFQSPEKIANLVKK
LRQELDDLLQEKIENPHPVDWNDIKCRDTAVLTAIIDLITTQENEGVRNFAPRFQGERYS
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
ggggccgcgccgggccgagccgtgccnctgaagggccgcgagatcgggctgtggtacgcc
cgcaagcagggccagaagagccgggacgccgaccggcagcagagagctgtcgtgcgcatg
gacgagcgcagggaagagcaaatcgtgcagctgctgaattctgtccagactaaaaacgac
aaagagcaagaagccatgtcctggtggtccggggatgaagaaggccctgctccagaacag
cctgccaaagtgaaaccacatgctgtaaaagctcctgtgagacagagaccagcctgggaa
aaaacatccctggatctggatgtggaatatctatgtgaaaaaaccgagcaggatgctgat
ttagatgagcaacttaaagaagacttaatgaagaagagatctgatcccagatatattgaa
atgcagagattccgagagaagctcccctcatacgggatgaaagaggagctggtgaagctg
atcaacagcaaccgcgtgacggtgatcagcggtgagacgggctgcgggaaaaccacgcag
gtgacccagttcatcctggacgatcacatcgagcgtggcctgggctccacctgcaggatc
gtgtgcacccagccccgcaggatcagcgccatctctgtgagtgccccttcccagtgctcg
gctttgtccccagtctgctgcaaagagccagtctgtcagtgtgccctgctccgatattca
cgagatgtccgtccgcaaagcactggcactgcagcctcctccttccctcactctagctca
tgggttctatctgtgattttaatggatttgggcagtgcaaatggcagggaggagaaaagg
tgcttttcaaggcatttctttgttatttacagaccagagtttgttaaatacggaagagaa
ctgaggagttcttattgtgtctctttcagtcggttgccaaggaaacaaggttcaattttg
tactgtaccacgggaattgtcctgcagtggctccagtcagataagcacttgtccagcatc
agtcatgtagttcttgatgaaatccatgaaagaaatcttcaatcagatgttttaatgagt
attattaaagatcttctgaatattcgactggatctgaaagttatactgatgagtgctact
ttaaatgcagagaagttttctgagtactttgaccattgcccaatgattcacatccctgga
tttaccttcccagtggtggaatatctgcttgaagatgtcattgagaagttgaggtacacc
ccagagaagatggatcgccggacgcactggaggaagggcttcatgcagggccacgtgagc
aggccagagaaggaggagaaggaggagatctacaggcagcagtggccaggctacctaagg
cagctgcagggcaggtattcagcaagtacaatcgatgccctggagatgatggatgatgac
aaggtggacctggaccttgtagcagcactgatcagacacatcgtgctggaagaggaggat
ggtgcaattctggtgtttctgcctggctgggataacatcagcactttgcatgagatcttg
atgtctcaagtcatgtttaagtcagataggtttattatcatacctttgcattcactgatg
cctactgttaaccagactcaggtgttcaagaagaccctgccaggagtgaggaaaatcgtg
attgcaaccaatattgcagagaccagcatcacaatcgatgacgtggtgtttgtaatagat
ggggggaagataaaggagactcactttgacacccagaacaacatcagcaccatggcagca
gagtgggtcagcaaagccaatgccaagcagaggaagggtcgagcaggaagagttcagcca
ggccactgttaccacttgtacaatggactgcgtgccagcctcctggatgattatcagcta
ccagagatcctgaggacacccttggaagagctctgcttacagatcaagatcctgaagctt
ggtggaattgccaattttcttagcaaactgatggaccccccatctcgtgatgctgtgatg
ttggccataaatcacctcatggagctgaatgctctggacaggcaggaggagctgactccc
ctgggtgtccacctggcacggctgcccgtggagccacacatcgggaagatgatcctgttt
ggagccttgttctgctgcctggaccccgtgctgaccattgcagccagcctcagcttcaag
gacccttttgtcattcctctgggcaaagagaaaatcgcagatgcaagaagaaaagaactg
tcaaagaactcgaagagcgaccatctgactgtggtgaatgctttcactggctgggaagag
gctcggagttgtggcttcaggaatgagaaggactattgctgggaatatttcctgtcctca
aataccatgcagatgctgcataacatgaaaggacagtttgctgagcatctccttgcagct
gggtttgtgaatagcagaaaccccaaggatcccaaatctaacaccaactcaggtaatgag
aagctgctcaaagcagtcatctgtgctggcctctatcccaaagtggcaaagatccggccc
agcttcagcaaaaagagaaaaatggtgaaagtttgcaccaagacagatggatcagttaat
atccatcccaaatcggtgaacgtggaggaaactgagttccattacaactggctcgtgtac
catttgaagatgaggaccagcagcatttacctgtatgactgcacggaggtgtctccatac
tgcctcttgttctttggaggggatatatccattcagaaggataaggaccaggacaccatc
gctgtggatgagtggattgttttccagtctccagaaaaaatagcaaacttggtcaagaaa
ttgagacaagaacttgatgatcttctacaagaaaaaatagaaaacccccatcccgtggac
tggaatgatattaaatgcagggatacagcagtgctgacagctattatagacttaatcacc
acgcaggagaacgagggcgtcaggaacttcgcgccgcggttccagggcgagcgctacagc
tga
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integrated database retrieval system
