Cyanistes caeruleus (blue tit): 111934025
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Entry
111934025 CDS
T05602
Symbol
CHD2
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccae03036
]
111934025 (CHD2)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111934025 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
111934025
NCBI-ProteinID:
XP_023789637
LinkDB
All DBs
Position
10
AA seq
1834 aa
AA seq
DB search
MLSSHGIICQGPSPDFTGHSASEEASGSDSASQSESEQGSESNSSSESSESQSESESEST
GSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKDEASSE
SENESPKRRRQKQLKRKIKWKREVSAGEEDEDGGEHGTSGESEPEPKKIKARRPVQRRTV
AKAGVKKPHKIQRGKRKKPDSSEDDDDDEDDETPKRQTRRRAAKNVSYKEDDDFETDSDD
LIEMTGEGADEQQDNSETIEKVLDIRLGKKGAIGASTTVYVTEANGNPSADFDPEKDEGE
VQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLGKVSPEDVEYFN
CQQELASELNKQYQIVERVIAVKTSKSATGHSDFPANSRKTSSNDPEYLCKWMGLPYAEC
SWEDEALISKKFQHCIDSFNSRNNSKTIPTRDCKVLKQRPRFVALKKQPSYIGGENLELR
DYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPLSTL
TSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALITTYEILLKDKTV
LGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQ
KQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGIETLQS
LIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEI
RKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGRSNSNPFNK
EELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQFKVAN
FATMEEEETELDERSQKDWDDIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQTND
SESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFTDAEIRRFIKAYK
KFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENPAEGKGPGK
RRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPSDPEERKKYRLTCRVKAAHFDVDWGVE
EDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQTRVDYLLKLLKKD
LDKKENMKDGEEGKLKKRKPRVKKENKAPKVKDEHGNELSSPRHSDNQSEEGEVKEDGLD
KSPVKKKQKKKENKENKEKQTSSKKEKESDKEKKKTKDKKEKPKGGEAKSGSKGKRSQGP
VHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLTVQEQLEHTRN
CLLKIGDRISECLKAYTDQDHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQEEE
EQKKKEDMSSMKKPFRPEPSGSSRDSVMSQSHVPHNPHSQKIHMPPSHTQQQMHGHPRDN
YGHPNKRHFSNTDRGDWQRDRKFNYGGNSNQMWGGERHHQYEQHWYKDHHYGDRRSRGDP
HRSSGNYRPNNLSRKRPYEQYNSDRDHRGGRAWGADLHPSFLHRHHHDSKRRRSDDFRPQ
NYHQQDFRRMSDHRPPMGYHGQGPSDHYRSFHTDKLGDYKQPLPPSHPAVSDPRSPPSQK
SPHDSKSPLDHRSPLDRSLEQKNNPDYNWNIRKA
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgttatccagccatgggataatctgccaaggtccttctccagacttcacgggtcactcg
gcatccgaagaagcctctggctctgactctgcaagccagtctgaaagtgagcagggcagc
gagtcaaacagcagctccgagtcctctgagagtcagtctgaatccgaaagtgaatcaacg
ggttccaaatcccagcagacccctcctgaaaccaaagaaaaaccagcctctaagaaggaa
aggatagcagatgttaaaaagatgtgggaagaatatcctgatgtttatggggttaggagg
tcaaaccgaagcagacaagaaccgtcacgatttaatataaaagatgaggcaagtagcgaa
tctgaaaatgagagcccaaaaagaagacgccagaagcaattaaaaagaaaaattaaatgg
aaaagagaggtctctgctggagaagaggatgaagatggaggggagcatggcaccagtgga
gagagtgagcctgaaccgaagaaaattaaagcaagaagacctgtccagaggagaacagtg
gccaaagctggtgtcaaaaagccccacaaaatccagcgtgggaagaggaagaaaccagac
tcatctgaagacgatgatgatgatgaagatgatgagacccccaagagacaaactcggcga
agagcagccaaaaatgtcagctacaaagaggatgatgattttgagacggattctgatgac
ctgatagagatgactggggaaggagctgatgaacaacaagacaacagtgaaactattgag
aaagtcttggacatcaggcttggaaaaaagggagccatcggagcttccaccacggtgtac
gtgaccgaggccaacggcaaccccagcgccgacttcgaccccgagaaggatgagggggaa
gttcagtacttgatcaaatggaaaggctggtcatacatccacagcacgtgggagagcgag
gagtccttgcagcagcagaaagtgaagggcctgaaaaagctagaaaacttcaagaaaaaa
gaggaggagatcaagcaatggctgggcaaggtatcacctgaagatgtagaatatttcaac
tgccaacaagagctggcttcagagctgaacaaacagtatcaaatagtggagagggtaatt
gctgtgaagaccagcaagtctgccacgggacattcagatttcccagcaaacagtcgcaaa
acttcctcaaatgaccctgagtacctgtgtaagtggatggggctgccctatgccgagtgc
agctgggaagatgaggctctgatcagcaagaaatttcagcactgcattgacagcttcaac
agccgtaacaactccaagacgattcccacccgggactgcaaggtgttgaagcagaggccg
aggtttgttgccttgaagaagcagccctcgtacattggtggggagaacctggagctgcgg
gattaccagctggagggcctcaactggcttgctcactcctggtgcaagaacaacagcgtg
atcctggctgatgaaatgggactgggcaagacgattcagacaatatcattcctgtcatac
ctgttccatcagcaccagctgtatggccctttcctggtggtcgtgcccctgtccaccctc
acctcctggcagagggagtttgaagtgtgggcacccgagataaacgtggtggtttacatt
ggagacctcatgagcaggaacatgatacgtgaatacgaatggatccattctcagtctaaa
agattgaaattcaatgcacttatcacaacttatgagatccttctgaaggataagactgtt
ttgggaagcattaactgggcctttctaggcgtggacgaagcccatcggctgaaaaatgac
gactccttgctgtacaaaacactgattgatttcaagtccaaccacaggctgctgatcact
ggcaccccgctccagaactcactcaaggagctctggtccctgctgcacttcatcatgcca
gagaagtttgagttctgggaggattttgaggaggatcacgggaaaggtcgagagaatggc
taccagagccttcacaaagtcctggagccgtttctcctgcgcagagtgaagaaggatgtg
gagaaatctttgccagccaaagtggagcagatcctgcgagtggaaatgtctgctctgcag
aagcagtattacaagtggattttgacaagaaactacaaagctctttcaaagggaacaagg
ggaagcacgtctggtttcctgaatattgtgatggaattgaaaaagtgctgcaaccattgc
taccttatcaaacctcctgaggaaaatgagagagagaatggcattgagaccctgcagtct
ttgatcaggagcagtggaaagctgattctcttggacaagctgctgactaggctgcgggag
agaggcaacagagtgctgatcttctcccagatggtgaggatgctggacatcttggcagag
tacctgactatcaaacactacccttttcagcgcttggacggctcgatcaagggggagatc
cgaaagcaggcgctggatcacttcaacgccgacggctccgaggacttctgtttcttgttg
tcaacacgagctggagggctgggaattaatttggcctctgctgatactgttgttatcttt
gactcggactggaacccccaaaatgatcttcaggctcaggctcgagctcatcggattgga
caaaagaagcaggtgaatatttaccgcctggtcacaaaggggacagtggaggaggagatc
attgagagagccaagaagaagatggtgctggatcatttggttattcagcgtatggacacc
actggccggactgttctggacaacaactccgggagatccaactcaaatcccttcaacaaa
gaggagctgacagctattttgaagtttggagctgaagatcttttcaaggagcttgaaggg
gaagagtcagagcctcaggagatggacatcgatgagattctgcgtctggctgaaacacgg
gagaatgaggtgtccaccagtgccaccgacgagctgctctcacagttcaaggttgccaac
tttgcaaccatggaggaggaagagacagagctggatgagcggtcccagaaggactgggat
gatatcattccagaagagcagaggaaaaaggtggaggaggaagaaaggcagaaagaattg
gaggaaatctacatgctgcctcgaatccggagctcaactaaaaaggctcagacaaatgac
agtgaatccgatgcagagaccaagagaaggcttcagagatcatctggatcagaaagcgag
actgatgacaccgacgacgagaagagaccgaagcgcaggggacgccctcggagtgttaga
aaagacactgtggaaggatttactgatgctgaaatcaggaggtttatcaaggcttacaag
aagtttggactgcctctggaacggctggagtgcattgcccgggatgctgagctggtggat
aagtctgtggctgacctgaagcggttaggggagctcatccacaacagttgtgtgtcagca
atgcaggaatatgaggagcagctgaaggaaaatccagcagaaggaaaaggacctggaaag
agacgaggtcctaccatcaagatttctggtgtccaagtcaatgtgaagtccatcatccag
catgaagaggagtttgaaatgctgcacaaatccattccctcggatccagaggaaaggaag
aagtaccgcctgacgtgccgtgtcaaagctgctcattttgatgtagactggggagtggag
gaggattctcgcttgttagtgggaatttacgagcatggttatggaaactgggagctaatt
aaaacagatccggagttgaagttatctgataagatcctacctgttgagacagataagaaa
cctcagggaaaacagctccagacccgagttgattatctactgaaattgttgaaaaaggat
ctggacaagaaagaaaatatgaaagatggggaagagggcaagctaaagaagaggaaacca
cgagtaaagaaagagaacaaggctcccaaagtcaaagatgagcatgggaatgaactctcc
tctcctcggcactcagacaaccagtcagaagaaggtgaagtcaaggaggatggcctggac
aagagcccagtgaaaaagaaacagaagaagaaagagaacaaagagaacaaggaaaaacag
acatcctctaagaaagaaaaggaaagcgataaagagaaaaagaagacaaaagacaagaaa
gagaagcctaaaggtggcgaggccaaatctggaagtaaagggaagagatcgcaaggcccc
gtccacatcactgcagggagcgagccaatccccattggagaagatgaggatgatgatctg
gaccaagaaacattcagcatatgcaaggaaagaatgagaccagtcaaaaaagcactgaag
cagcttgataagcctgataagggactgacagttcaagaacagctggaacacacgcgcaac
tgcctcctaaaaattggtgatcgcatctctgagtgccttaaagcctacactgaccaggat
cacatcaagctatggagaaggaacctatggatatttgtgtcaaaattcacagaatttgat
gccagaaaactacacaaactctacaagatggctcataagaaaagatcacaggaagaggag
gagcagaagaagaaggaggacatgtccagcatgaagaagccgttccgcccagagccttca
ggctccagccgcgattccgtgatgtcccagtctcacgtgcctcacaatcctcattcccag
aagatccacatgcccccttcccacacccagcagcagatgcacgggcacccacgggacaac
tacggccatccaaacaagagacatttcagcaacacagaccgaggagactggcagagggat
cgaaagttcaactacggcggcaacagcaaccagatgtggggcggggagcggcaccaccag
tacgagcagcactggtacaaggaccaccactacggggaccggcggtcgcggggggatccc
caccggagctccgggaactacagaccaaacaacctctcccgcaagaggccctacgagcag
tacaacagcgaccgagaccacagaggaggccgggcttggggagctgatctccatccctct
ttcctccacaggcaccaccacgattccaaacggcggcggtccgacgacttcaggcctcag
aactaccaccagcaggatttccggcggatgtctgaccacaggccgcccatggggtaccat
ggccagggaccttccgaccactaccggtccttccacacagacaaactgggggactacaaa
cagcccctccctccatctcaccctgcagtgtcggaccctcgctcgcccccctctcagaag
tccccccacgattccaagtcacctctcgatcacaggtcacctctggataggtcattggaa
cagaaaaacaatccagattataactggaacattcggaaagcgtaa
DBGET
integrated database retrieval system
