Cyanistes caeruleus (blue tit): 111934212
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Entry
111934212 CDS
T05602
Name
(RefSeq) vacuolar protein sorting-associated protein 13C-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccae04131
]
111934212
Membrane trafficking [BR:
ccae04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111934212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_M
VPS13_VAB
VPS13_C
WWE
Motif
Other DBs
NCBI-GeneID:
111934212
NCBI-ProteinID:
XP_023789935
LinkDB
All DBs
Position
10
AA seq
2209 aa
AA seq
DB search
MSFLTFRVPSGGLPSTDKSSDHKPQMKEQEKGSTFRPVSGDAAHDDVCELKLTAKLNAFS
ITVCDQTCRIADIRIQGMDASVIKKPKKIKVFSRLEDIVITNVDPETIHKKAVCIMGDEV
FRFHMSLYPDATAGEAYTDMSRVDGKMSLKVGCIQIIYLHKFFMSLLNFLNNFQAAQEAL
TAVTVQAAEMAASSMKDFAKKSFRLLMDVNLKAPVIVVPESSASCNALIADLGLIRVQNE
FKLVSSDESSLPPVIDNMDVQLTHLKLSRCIISADSQPDSEILRPVSLTLLVQRNLAAAW
YHKSPTICIKGDLKPMQIALSEDDLTVIMKILLENLGGSSSQPNTLQENIEDTQIPKKGK
APHESGGSEGALVDSGQKSVSAVQSSMECYTLLKFDFNFESLSVTLYNSDTTQESLLLVH
SDKLRLGELRLHLMASAGEMFSDGSMDISVKLKACTLDDLREGIQNVTARMIDKKDDTNE
SSMIDIRYKQDKNGTQVVAVLDKLYICASMEFLLTVAHFFIKSMPVSSAEGSAQFQLKQV
TSGKSKAATEISVRPNMTVKAVIMDPEVVFVANLTNADAPALKVSFQCDFFLTSDKLAQR
MTAQVKAFKVLACAFLKEKQGKNVTTVLRPCSLVMENMVHTSGLHTVAVTIEELTIKISP
IILNTVVTIMAALKPKTAEDDSKGAPEVSENLWQVKPVDECNAWFLGVDIATEATETFMD
REQILKQEKFDIVVKSVQMTLECGLGHRTVPLLLVESTFSGVLKNWSSLMEVTADMSLEV
HYYNETYAVWEPFIERVEGGKKQWNLKLEMRTNPVQERSLLPGDDFIVIPEPQTVVNISS
MDTMNITISKCCLAVFSNLAKAFSEATASTFDYSFKETAPFVVKNALGVSLKVLPSSNFR
IVDSVAKENMNEIETGQSMELEYSVFEAPQRGRLSALYRQESSVFSLNLELQGYKEVLSI
PVAKPGRRLYNVREAADRSDSIVVQIDATEGNKVITVRSPLQIKNHFSIPFVIYTLTKGS
KSLKPIGISKPEEEFHVPLHSYRCHLYVRPTGIFEGQFKESTTYIAWREELHRSNEVKCL
LQCPATETSFLPLIISSTAVPDELNFISSSVEELDPAYIIHLYPTLTVRNLLPYSLRYLL
EGTAEARELTEGSAADVFHSRISGEIMELVLLKYQGKDWNGHLKICDGMPEFFPVRFTSH
SVSEMSVDVYIHSRRIGSHMVLSVFSPYWIINKTSRVLQYRAEDTHVKHPADYRDIVLFS
FKKKNIFSKNKIQLCISTSTWSNSFSLDTVGSYGCVRCSTNYMDYLVGVSIRMSSFNLTR
IVTFTPFYTIANKSSLELEVGEIGPNGSLPTNKWNYISASECLPFWPENSSGELCVRVVG
FESSSKPFLFKAQDNGTLLKLEELNGGLLVDVNVSEHSTVISFTDYHEGAAPALIVNHTP
WDSLRYKQSGLQEEMELKPKQVCLFAWTDPTKPRKFTWGYSQSFGEHDLLKDDCGQFPYN
ANTQIHWVSFLDGRQRVLLFTDDVALISKARQAEELEQPDQEINLSIHSLGLSLVNNENK
KEISYIGITSSDVVWEQKPRQKWKPFNQKQINLLEQAYQKYLSKSAFQGPGWHKLDSNTE
VNFSKSPMEMRLPVRCSIRRNFLSGIQVEFKQSPHQRSLRAQLYWLQVDNQLPGSTFPVV
FHPVAPPKSIALDSEPKPFIDISIITRFNEYSQVLQFKYFMVLIQEMALKIDQGFLGALS
ELFTPSTDPEAERRRSKLIQQDVDALNTELMDSSLTDLSMLSFFEHFHISPIKLHLSLSL
ASGGEASDKGEEMIAIHSLNLLLKSIGATLTDVDDLIFKLAFFEIKYQFYKTDQLRTRVI
RHYSEQFLKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPFQGAVQGPEEFAEGFVIG
VRSLLGHTVGGAAGMVSRITGTVGKGLAAITLDEEFQQKRREEMGRQPKDFGESLAKGGK
GLLRGVVGGVTGIITKPVEGAKKEGAAGFFKGIGKGLVGVVARPTGGIVDMASSTFQGIQ
RVAESTEEVSNLRPPRLIREDGIIRPYNRVEAEGYDLFEKLHIRKLEKEVYRYHCAIPRG
RRANLIVTNRRVIYVKEVEILGHLTTEWDYLFEEFTRYPSYEANILKITVLQDQKMFQRK
DSTGHECVKTVQLQDEATARRVCCAIQEAQTTRKQEKLVKRASLQLRKP
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcctcaccttcagagttccatcgggtggtcttcccagtactgataaatcatca
gaccacaagcctcaaatgaaagaacaggaaaaaggaagtacttttagaccagtgtctggt
gatgcagcccacgatgatgtctgtgaattaaaactcactgcaaagctaaatgcattcagt
attacagtgtgtgatcagacctgtagaattgcagacattagaatacaaggaatggatgca
tctgtgattaagaagcctaaaaagattaaagtgttctccagacttgaggacattgtaatt
acaaatgttgatccagaaacaatccataaaaaggctgtctgcataatgggagatgaagtg
tttcgatttcacatgtcactttatccagatgccactgcaggggaagcctacactgatatg
tcaagggtggatggtaaaatgtctctgaaagtgggctgcatccaaataatttacctacat
aagttctttatgtctctcttgaacttcctaaacaatttccaagcagcacaagaagccctg
actgcagtcactgtccaggcagcagaaatggctgcttccagcatgaaggactttgctaaa
aagagcttccgccttctaatggatgtcaacttgaaagctccagtcatagttgtccctgaa
tcttcagcttcatgtaatgctttgatagctgatcttggcttaatcagagttcagaatgaa
ttcaagctggtgtcttcagatgaatcttctcttcctccagtcattgacaacatggatgtg
cagctgactcacttgaaattatcaaggtgcattatatctgcagattcacagccagattct
gaaattctgcgtcctgtgagtttgactttactggtccagagaaatttagcagcagcatgg
tatcataagagcccaacaatttgtatcaaaggagacctaaaaccaatgcagattgcactc
agtgaagatgatctaactgttataatgaaaattttacttgaaaaccttggagggtcttct
tcccagccaaatactctgcaagagaatattgaggatactcagatacctaaaaaagggaaa
gctccacatgaatctggtggctctgagggtgcccttgttgattctggacaaaaaagtgtt
tctgcagttcagtcttctatggaatgttatacattgcttaaatttgacttcaattttgag
tccctttctgtaactctctacaacagtgacacgactcaggaatctctgctcttggtgcat
agtgacaaattgcgccttggtgagctccggctgcatctcatggcatcagcaggggagatg
ttctcagatggctccatggatatcagtgttaaactcaaagcatgtaccttggatgatctc
agagaaggaattcagaatgtgactgcaagaatgatagacaagaaagatgacacaaatgag
agttccatgatagatataagatataagcaggataaaaatggaactcaagttgttgctgtc
ctcgacaagctgtacatatgtgccagtatggaatttttgttgacagtagcacattttttc
attaagtcaatgccagtatcttcagctgaaggatctgcacagttccagttaaagcaagtt
acttctgggaaatccaaggcagcaacagaaatatctgtacggccaaacatgacagtaaaa
gctgtgattatggatccagaagttgtatttgttgctaatttgaccaatgctgatgcccct
gccttaaaagtttccttccaatgtgacttttttctgacatcagacaagcttgcacaaaga
atgactgctcaagtgaaggccttcaaagtgttggcctgtgcctttctcaaagaaaaacaa
ggcaagaacgttactacggtgttgcggccgtgctccttggtcatggaaaatatggtgcac
acttcagggttacacactgtggcagtaacaatagaggaactaactattaagatatcacca
ataattttgaatactgtcgtgaccattatggctgccctaaaacccaaaacagctgaggat
gattctaaaggagcaccagaagtttctgagaatttgtggcaagtgaagcctgtagacgag
tgcaatgcttggtttcttggtgttgacatagccacagaagcaacagaaacttttatggac
cgtgaacaaattctgaagcaagagaagtttgacatcgtagtgaaatctgttcagatgacc
ttggaatgtggtctggggcatcgaactgtccctttattgttagtggaatctacattttca
ggtgttcttaaaaactggtcctcactgatggaggtcactgctgatatgtcattggaggtt
cattattacaatgaaacctatgcagtgtgggagccatttattgaacgagtcgaaggagga
aagaaacaatggaatttaaagctggagatgaggactaaccctgtccaggagagaagtctg
ctgcctggggatgatttcattgttattcctgagccacaaactgtagttaatatctcttcg
atggataccatgaatataacaatatccaaatgttgtcttgctgttttcagtaacctagcc
aaggcattttcagaagcaactgcatccacctttgactattcctttaaagagacagcacct
ttcgtagtgaaaaatgccctgggtgtttctctgaaagttcttcctagctccaattttcgg
atagtggattcagttgcaaaagaaaacatgaatgaaatagaaactggtcagagcatggaa
ctggaatactctgtttttgaagcaccccagcgaggaaggttgtctgcattgtaccgacag
gaaagctctgtcttctctttaaatttagaacttcagggatataaagaggtgctcagcatt
cccgtggccaagccgggccgccgcctgtacaatgtcagggaggctgctgatcgctcagac
tccattgttgtgcagattgatgctacagaagggaataaggtcattactgtgcgctcccct
ctgcagattaagaatcatttctcaattccatttgtgatctatacactgactaaaggctcc
aagtccctgaagccaattggcatatccaagccagaagaggagtttcatgttcctctgcat
tcatacagatgtcatctgtatgtccgaccaacaggaatatttgagggtcagttcaaggag
tctacaacttacattgcctggagggaagagctacacagaagcaatgaagtcaagtgcttg
ttacagtgcccagccactgaaaccagtttcttgcctctaataatcagctcaacagctgta
cctgatgaactaaattttatttcaagttctgtagaggagttggatcctgcctacattatc
cacctttaccctacgctgactgtgaggaatcttctaccatactccttgagatatttactt
gagggaaccgcagaagcccgtgaattaactgaagggagcgctgcagatgtttttcattca
agaatcagtggagaaataatggagcttgtgttgttaaaatatcaaggcaaagactggaat
ggccatcttaaaatttgtgatgggatgcctgaattttttcctgtgcgtttcacatctcat
tctgtctcagagatgtctgtggatgtttacatccattccaggcggatcggcagccatatg
gtcttgtccgtgttcagtccctactggatcatcaacaagacttcccgtgttctccagtac
cgagctgaagacactcacgtgaagcatccagcagactacagagatattgttttgttttca
tttaaaaagaaaaatatctttagtaagaacaagatccagctctgtatttcaactagcact
tggtccaatagcttttccctcgatactgtaggaagctatggatgtgtcaggtgttcaact
aattacatggactatctggttggagttagcatcagaatgagcagtttcaaccttactagg
atagttaccttcacaccattctacacaatagcaaacaaatcttctctggaacttgaagtt
ggagaaattggtcctaatggttctcttccaactaataaatggaattacatctcagcttca
gagtgccttccattttggcctgaaaactcatctggtgaactttgtgtaagagtagttggc
tttgaaagctcatccaaaccattcctgtttaaagcccaggataatggtactctgctgaaa
ctggaagaattgaatgggggcttgctggtagatgtgaatgtctcagaacattctactgtg
ataagcttcacggattaccacgagggagctgccccagctctgattgttaaccacacccca
tgggactctctcagatataaacagagtggattacaagaggaaatggagttgaaaccaaag
caagtatgcctctttgcctggacagatccaaccaaaccgagaaaatttacttggggttac
tctcaaagttttggtgaacatgacctacttaaggatgactgtggccagttcccttacaat
gcaaatactcaaattcactgggtgtccttcctggatggacgccagcgagtgctgcttttc
acagatgatgtggcattgatttctaaagcacggcaggcagaggagctggagcaacctgat
caagaaataaacctgtcaatccatagtcttggactttctctagttaacaatgaaaataaa
aaagaaatctcttacataggaattactagttctgatgttgtttgggaacagaaaccaagg
caaaagtggaaaccatttaatcaaaagcaaataaacctattggaacaagcatatcaaaaa
tatctctccaagagtgctttccaaggtcctggctggcataaactggacagcaatactgag
gtgaatttcagtaagtctccaatggaaatgcgtctccctgtcagatgcagcatccgccgt
aacttcctgtcaggaattcaggttgaattcaaacaatcacctcaccaaagaagcttacgg
gctcagttgtattggctgcaggtagataatcaattaccaggatcgacgtttcctgttgta
tttcaccctgtggcccctcccaagtcgattgctttggattcagaaccaaaacccttcatt
gatatcagcatcatcactagattcaatgagtacagccaagtcctgcagttcaagtacttc
atggttcttatccaggaaatggcactgaaaattgatcaaggatttttaggagcacttagt
gaacttttcactccatctacagacccagaagctgaaagacgaaggtctaaattaattcag
caagatgtggatgcacttaacaccgagctaatggactcttccctaacagacctgtcaatg
ctcagcttctttgaacatttccatatttctccaattaagttgcatttgagtttgtctctg
gcttctggtggagaagcatcagacaagggggaagaaatgatagccatccattctctgaat
ttgctgttgaaaagtattggagctactctaacagatgtagatgatcttattttcaaactt
gctttctttgaaattaaataccagttctacaagacagatcaactgaggacgagagttatt
agacattatagtgaacaattcctgaaacagatgtatgttcttgtacttggattagatgtt
cttggaaatccatttgggttgatcagaggtttgtctgagggagttgaagctttcttctat
gagccatttcagggtgctgttcaaggacctgaagaatttgctgaaggttttgtaattggt
gttagaagtcttcttgggcacacagtgggtggtgcagcagggatggtgtccaggatcact
ggtactgttggcaaaggcttggctgccattactctggatgaagaatttcagcagaaaagg
agagaggaaatgggtcggcagccaaaagactttggggagagcctggccaaaggaggaaaa
ggcctcttacggggtgttgttggaggtgtgacaggcatcatcactaaaccagtagaaggg
gctaaaaaagaaggtgcagctggattctttaaaggaattggaaaggggcttgtaggagtg
gtagcccgcccgacaggaggcattgtagatatggcaagcagcaccttccagggaattcaa
agggtggcagaatcaactgaagaagtgtcaaatctccgtcccccacgcctcatccgtgaa
gatggcatcatccggccctacaacagggtggaagctgagggatatgatttatttgagaag
ttacacatcagaaagttggaaaaagaggtgtatcgttaccactgtgcaattccaagaggc
agaagagctaaccttattgttaccaataggagagtgatatatgtgaaagaagtggaaatc
ttaggccatttaacaacagaatgggattacttatttgaagaattcacgcgttatccctcc
tatgaagcaaatattttaaaaattactgttttgcaggatcagaagatgttccaaagaaag
gacagtacaggtcatgaatgtgtaaagacagttcagcttcaggatgaagctacagcaagg
agggtttgttgtgccattcaggaagcccagacaacacgaaaacaagagaagctggtaaag
agagcatccttgcagctgaggaaaccttaa
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integrated database retrieval system
