Cyanistes caeruleus (blue tit): 111934675
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Entry
111934675 CDS
T05602
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccae03036
]
111934675 (TDRD12)
Enzymes [BR:
ccae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
111934675 (TDRD12)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111934675 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
CS
ERCC3_RAD25_C
TK
EF-hand_3
Motif
Other DBs
NCBI-GeneID:
111934675
NCBI-ProteinID:
XP_023790612
UniProt:
A0A8C0VFW0
LinkDB
All DBs
Position
11
AA seq
1316 aa
AA seq
DB search
MGRAGPGARPGGGSGGGSAGAFWKERREAPSGRFCGQRAGVRAGPGRVWSLGAPDERVVI
GETQEINMEVVVLKIEDPSCFWIAVKDYVPGIVSETVYENLNAEMKQFYNSYRDSDAIKQ
EEIEKGQVYVVFSEELKCWCRALVESVWCQADGYQLGCFLVDYAKYCSVASENVRVLVGA
FAKIPHRAKKCRLHCTKPLTLHIDYCENTAKIGPAKKWDTAAIQHFRKLLDEATEVKATI
QAVEDEVLEVFLFVTVRDEKICINDDLVAKHFAHYKEGEGTAESSTDDSDNEVSLNAECV
PVEFVGPTFLARPKLPFGDTMSPHLEPGLASCNSVLEKTSQRSHTVLNDNTVPVVSMVPD
VPSKEDKAVQTERLPQFLNSNSLQTQTVEDDQQSFQNAGKEKNFVFLSKKIEPSSVLETA
PLFDGLKKELPWNKLSACTFTESYCWPPLAWGFDVVAISQQGHDPLLYIPPVLTLLQLES
DYQALPNMSGPLALILCPGWKKAQLVFDLLKTYRKGCSRLHPMLIILGQNKDAARQVEIR
GCEVVVTTPFNLLRLLEHNTGLLCRLCHLVLDEIEVLFSDTTEQVFTILDCYKKATAQAQ
RNLPHQIIAVGTQWNKHITPLIKEFMHDPHIVITVIEEAAIFGNVQQVVQPCMNSNRTAE
LLKILNFTQRNLQKVLVFSDSVDEVEMIHKVLKSNSVVSLKKHRDSKCNAECVLERWRKM
HSSGTQAVLVLTDDCLQSLGITDATCVIHFSFPSPGVFGQRLQSMSDNFCSGIKDSTVDQ
EHMKAKSVILLTENSSCHALGILRYLKHAEAEIPEELYDLTARVLESEENEKFSRPLCAS
LKTFGICRNRTECPDRHQINLSIDMAQNIADEMIETPERVTILPLFIVHATNYFGRIVKK
QKDQYTVLAKEINDYFKLPGHRISASTVEKSVFYGLCEGAICHRVQVVETPAKDEENVCK
VTIKYIDEGRTSQVNSDQLLHLPAKFQSLPPQAVEIVVCRVKPIDNEVEWNPKVTDHINH
KIKGKLHHAKVMHTLGKTVWVDPMVGVTNLPTMKMWVNEYNIRSEILSTGLGTDNPEHIG
EIQKLCRQIPVLDHAESLEHLRTRPETAVEKFGTSVQALLERSTKEDTAGLEEASSPQET
LIQENATESANGSVTPPSNNVLTKEAEDSTVHQQKGYHPQIKWFQDNVTVTLKVQILRAA
DSKCEFYREKVTFSAYSEGKLYVADLELYESVIAETCTCLIKDTEAVILLVKEKKGMWCK
LLKNKNVHVSLDFEHWEESEDGRPFTVGPARPGSYPPAGSEDWFESSEDSDTESDE
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgccgggcccggagcccgccccgggggtggttctggaggcgggagcgctgga
gctttctggaaggagcggagggaagcgccttctggaaggttctgtgggcagcgggcggga
gtgagggccgggccgggccgtgtgtggagcctgggagcgccggatgaacgagtagtgata
ggggagacacaggagataaacatggaagtcgtggtattaaagattgaagatccaagttgc
ttttggattgctgtgaaagactacgtgccgggcatagtcagtgaaactgtgtatgaaaac
ctgaatgctgaaatgaaacagttttataacagttacagagactcagatgcaataaaacaa
gaggagatagaaaaaggccaggtttatgtggttttcagtgaggaactcaagtgctggtgt
agggcactggttgagtcagtgtggtgccaggcagatggttaccagctcggatgtttcctt
gtggattatgccaagtactgttccgttgcatcagagaacgttcgagttttagtaggagca
tttgcaaagatcccacatagagcaaagaagtgtcggctgcactgcacaaagccactgaca
ctgcatattgactactgtgaaaacactgccaaaataggaccagccaaaaaatgggatact
gctgctatccagcattttcgaaaacttcttgatgaggctaccgaggttaaagccacaata
caggcggtagaagatgaagtgttagaggtgtttctttttgtgactgtaagagatgaaaag
atatgtattaatgatgatctggttgcaaagcactttgctcattacaaggaaggtgaaggg
actgcagagagttctacggatgattctgacaatgaagtgtcgttaaatgctgagtgtgtt
ccagtggagtttgttggtcctacatttcttgccaggccgaaactgccctttggggacacg
atgtcaccacatcttgagccaggtcttgctagttgtaattctgttcttgaaaagacgtcc
caaaggtcacacacagttctaaatgacaatactgtccctgtggtcagcatggttccagat
gtaccttctaaggaagataaagcagttcaaacagagaggcttccacagttcttaaattcc
aattccctccagacacagacagttgaagatgaccagcagagttttcaaaacgctgggaaa
gaaaaaaactttgtgttcctgagcaagaaaattgaaccatcatcagttttggaaacagca
ccactttttgatggtctgaaaaaggaacttccttggaacaagctttcagcctgtaccttc
actgagtcctactgttggccaccattagcttggggatttgatgttgttgccatctcccaa
cagggacatgatcccttattatatattccacctgttcttacacttctgcagttggaaagt
gactaccaagccttgccaaacatgagtggaccactagcattgattttatgtcctggatgg
aagaaggcacaacttgtttttgacctgctgaaaacatacaggaaaggctgcagccgcctt
catccaatgctgataatccttgggcagaacaaggatgcagccagacaagtggaaatcaga
ggctgtgaagtagtagtgactacaccattcaaccttctgagactgctggaacataacact
gggttattgtgtaggctttgccatcttgttcttgatgagattgaggtgctgttctctgac
actactgaacaggtgtttactatactggattgttacaagaaagccactgctcaggcacaa
aggaatctaccacatcagatcattgctgtgggaactcagtggaataagcacatcacaccc
ttgataaaggagttcatgcatgatcctcacattgtgataacagttatcgaagaagctgcc
atctttggtaatgtgcaacaggtagtgcaaccctgcatgaacagcaacagaactgccgag
ttactcaaaatcctgaattttacccagaggaatcttcaaaaagtgctggtattcagtgac
tcagtagatgaggtagagatgattcataaggtactgaagagcaactcagtagtttccttg
aaaaagcatagagacagcaaatgtaatgctgagtgtgtcttggagaggtggagaaaaatg
cacagttctggcactcaggctgtgttagttttaacagatgactgcctgcagtccttggga
atcacagatgcaacttgtgtgatccatttcagtttcccatctccaggagtctttgggcag
cgcctgcaaagcatgagtgacaacttctgctctgggataaaggattctactgtagatcag
gaacatatgaaagccaagtcagtcattctgctgacagagaacagttcctgccatgcactt
gggattctccgttatttaaagcatgcagaagctgaaattccagaggaactctatgacttg
actgccagggtgctggaatctgaggaaaatgagaaattttcaaggcccctgtgtgcttct
cttaaaacatttgggatctgcaggaacagaacagagtgtccagatcgtcatcaaattaat
ttatcaatagacatggcccagaatattgcagatgaaatgatagaaacacctgaacgtgtg
acaatcctgcctctcttcattgtacatgcaacaaactactttggtcgaatagtcaagaaa
caaaaggaccaatatacagttcttgctaaagaaataaatgattacttcaagctaccagga
cataggatttctgctagcactgtggagaagtcagtgttttatgggttatgtgagggagcc
atttgccacagggttcaggtggtagagactccagcaaaagatgaagaaaatgtctgtaag
gtcacaattaaatatatagatgaaggcaggacaagtcaagtgaatagtgatcagctgctt
cacttacctgcaaagtttcagagtctgccacctcaggctgtggaaattgtagtttgtaga
gtaaaacccatagataatgaagttgaatggaatccaaaggtgactgatcacattaatcac
aaaattaaaggaaaacttcatcatgcaaaagtgatgcataccttgggaaagacagtttgg
gttgacccaatggttggggttaccaatcttcccacaatgaagatgtgggtaaatgagtac
aacattcgatctgagattttgtcgacgggtttgggaaccgacaatcctgaacatatagga
gaaattcagaagttgtgcagacagataccagttttggatcatgcagagagcttggaacat
ttacgcaccaggcctgagactgctgttgaaaaatttggaacttcagtacaggctttgtta
gaaagaagcacaaaagaggacacagctggtctagaggaggcatccagtccacaggagaca
ttgatacaggaaaatgctactgaaagtgctaacggttctgtgactcctccaagcaataat
gttctaacaaaagaagctgaagactctactgtgcatcagcagaagggctatcatccacaa
atcaagtggtttcaagataatgtgactgtgacactgaaggtacaaatactgagggcagct
gacagtaaatgtgagttctatagagagaaggtgactttcagtgcttattcagaaggcaaa
ctttatgtggctgacctggagctgtatgagtcagtaattgcagagacgtgcacatgtttg
attaaggatacagaggctgtgattttactggtaaaagagaaaaaaggaatgtggtgcaaa
ttactgaagaacaagaatgttcacgtgtccttagattttgaacattgggaagaatctgaa
gatggaaggccttttacagttggtcctgcaagacctggaagctaccctcctgcaggatct
gaggactggtttgagtcctcagaagacagcgatacagaaagtgatgaataa
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integrated database retrieval system
