Cyanistes caeruleus (blue tit): 111934948
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Entry
111934948 CDS
T05602
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccae04121
]
111934948 (PDZRN3)
Enzymes [BR:
ccae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111934948 (PDZRN3)
Ubiquitin system [BR:
ccae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
111934948 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
111934948
NCBI-ProteinID:
XP_023790876
LinkDB
All DBs
Position
12
AA seq
777 aa
AA seq
DB search
MGCSLCTLQKPEEQYKLLYEVCQVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRAPRAK
AHEPQLVDVGTQTDITFEHIMALSKMGSPSPPVPVLDPYLLPEDHPAVHEYYDPNDYMGG
IHQEMDRDELELEEVDLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKDGRLR
EGDRIIQINGIEVQNREEAVALLSSEESKNISLLVARPEIQLDEGWMDDDRNDFLDDLHM
DMLEEQHHQAMQFTASMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSE
QENNGDDHTTSSNTLGSQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVDECER
FRELLELKCQVKSANPYGLYYHNSTLEMSKSDQESVDRELEMLNEELRNIELECLNIVRA
HKMQQLKEQYREPWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCR
STPLTLEISPDNSLRRTAEGINCQGNEGAVAYNVSQKNLFAGSESHESSAGKCHASIKDP
DLGKQLESKERKGSDGSKSPTHGQKASGSSYVSPYHHSPYKHAHIPAHAQHYQSYMQLIQ
QKSAVEYAQSQMSLVSMCKDLASGQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIK
IKEERSGMTTDDDAISEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLECLKEQQGA
EEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagtttgtgcactctgcagaagccagaagagcagtacaagttactgtatgaa
gtttgtcaggtcaatgggaaggatttatccaaagccacccacgagcaggcggtggaagcg
ttcaaaaccgccaaggagcccatcgtggtgcaggtgctgaggagggccccgcgcgccaag
gcgcacgagccgcagctggtggacgtgggcacccagaccgacatcaccttcgagcacatc
atggccctcagcaagatgggctcgcccagccctcccgtccccgtgctggacccctacctg
ctgcctgaagaccatccagctgtgcatgaatactatgacccaaatgactacatgggaggg
attcatcaagaaatggaccgggatgagttggaattagaggaagtggatttacacagagtg
aacagccaggacaagcttggcctcactgtctgttacagaacagatgatgaagatgacatg
ggtatttatgtgagtgagatcgaccccaacagcatcgccgcgaaggacgggcggctccga
gaaggggatcgcattatccagatcaatggcatcgaggtgcagaaccgagaggaagctgtg
gcgcttctctccagtgaggagagcaagaatatctccttacttgtggcaagaccggaaatt
cagctggatgaaggatggatggatgatgacagaaacgattttctggatgacttgcacatg
gatatgttagaggaacagcaccaccaggcaatgcaatttactgccagcatgcttcagcag
aagaagcatgaggaggatggaggcaccacagacacagccactattttgtccaaccagcac
gagaaggacagcggcgtggggcgcacggacgacagcacgcgcaacgacgagagctccgag
caggagaacaacggggacgatcacactacctcctccaacactctggggagccagaagaag
ctgacctacagccacgacaccctgggaagcggggacatgcagttcagcaacgagtcgttc
atctcagccgactgcaccgacgtcgacttcctcggcatccctgtggacgagtgcgagcgg
ttccgggagctgctggagctgaagtgccaggtgaagtctgccaacccctacggtctgtac
taccacaacagcaccctggagatgagcaaaagcgaccaagagagcgtcgacagagagctg
gagatgctcaacgaggagctgcgcaacatcgagctggagtgcctcaacatcgtcagggcg
cacaaaatgcagcagctgaaggagcagtaccgggagccctggatgctgcacaacagcggc
ttccgaaactacaacacgagcatcgacgtccgcaggcacgagctctcggacatcaccgag
ctgcccgagaagtccgacaaggacagctcgagtgcctacaacacgggcgagagctgccgg
agcactccgctcacgctggagatctcccctgacaattccctgcgcagaactgcagaaggc
attaactgtcaaggaaacgagggggcagtggcgtataatgtctcccagaagaatttgttt
gctggctcagagagccatgaatccagcgctggtaaatgccacgcctccattaaagatcct
gaccttggcaagcagctggagagcaaggagaggaaaggcagcgatggcagcaaaagccca
actcacgggcagaaagcctcgggctcctcctacgtgtccccctaccaccactctccctac
aaacacgctcacatccctgcccacgcccagcactaccagagctacatgcagctgatccag
cagaaatccgccgtggaatacgcacagagccagatgagcctggtgagtatgtgcaaggac
ttggcctcgggccagagcgagcccaggatggagtggaaggtcaaggtcaggagcgacggg
acgcgctacatcaccaagaggccggtgagggacaggctgctgagggaacgggccataaag
atcaaggaggagcgcagtgggatgaccacggatgacgatgccatcagtgagatgaagatg
ggccggtactggagcaaggaggagaggaagcagcacctggtgaaagccaaggagcagagg
aggcggcgggagttcatgatgcagagcaggttagagtgcttaaaggagcagcaaggtgca
gaggagaagaaggagatgaacatcattgaactgagccacaaaaaaatgatgaagaagaga
aataaaaaaatatttgacaattggatgacaatccaagaactgctaacccatggaacaaag
tcaccggacggcacgcgggtgtacaattccttcctgtcagtgactactgtataa
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integrated database retrieval system
